Zheheng Jiang - Academia.edu (original) (raw)

Papers by Zheheng Jiang

Research paper thumbnail of Diagnostic of Multiple Cardiac Disorders from 12-lead ECGs Using Graph Convolutional Network Based Multi-label Classification

2020 Computing in Cardiology Conference (CinC)

Automated detection and classification of clinical electrocardiogram (ECG) play a critical role i... more Automated detection and classification of clinical electrocardiogram (ECG) play a critical role in the analysis of cardiac disorders. Deep learning is effective for automated feature extraction and has shown promising results in ECG classification. Most of these methods, however, assume that multiple cardiac disorders are mutually exclusive. In this work, we have created and trained a novel deep learning architecture for addressing the multi-label classification of 12-lead ECGs. It contains an ECG representation work for extracting features from raw ECG recordings and a Graph Convolutional Network (GCN) for modelling and capturing label dependencies. In the Phys-ioNet/Computing in Cardiology Challenge 2020, our team, Leicester-Fox, reached a score of 0.627 ± 0.054 using 5fold cross-validation on the full training data.

Research paper thumbnail of Multi-View Mouse Social Behaviour Recognition With Deep Graphic Model

IEEE Transactions on Image Processing

Home-cage social behaviour analysis of mice is an invaluable tool to assess therapeutic efficacy ... more Home-cage social behaviour analysis of mice is an invaluable tool to assess therapeutic efficacy of neurodegenerative diseases. Despite tremendous efforts made within the research community, single-camera video recordings are mainly used for such analysis. Because of the potential to create rich descriptions for mouse social behaviors, the use of multi-view video recordings for rodent observations is increasingly receiving much attention. However, identifying social behaviours from various views is still challenging due to the lack of correspondence across data sources. To address this problem, we here propose a novel multiview latent-attention and dynamic discriminative model that jointly learns view-specific and view-shared sub-structures, where the former captures unique dynamics of each view whilst the latter encodes the interaction between the views. Furthermore, a novel multi-view latent-attention variational autoencoder model is introduced in learning the acquired features, enabling us to learn discriminative features in each view. Experimental results on the standard CRMI13 and our multi-view Parkinson's Disease Mouse Behaviour (PDMB) datasets demonstrate that our proposed model outperforms the other state of the arts technologies, has lower computational cost than the other graphical models and effectively deals with the imbalanced data problem.

Research paper thumbnail of CANet: Context Aware Network for 3D Brain Glioma Segmentation

Automated segmentation of brain glioma plays an active role in diagnosis decision, progression mo... more Automated segmentation of brain glioma plays an active role in diagnosis decision, progression monitoring and surgery planning. Based on deep neural networks, previous studies have shown promising technologies for brain glioma segmentation. However, these approaches lack powerful strategies to incorporate contextual information of tumor cells and their surrounding, which has been proven as a fundamental cue to deal with local ambiguity. In this work, we propose a novel approach named Context-Aware Network (CANet) for brain glioma segmentation. CANet captures high dimensional and discriminative features with contexts from both the convolutional space and feature interaction graphs. We further propose context guided attentive conditional random fields which can selectively aggregate features. We evaluate our method using publicly accessible brain glioma segmentation datasets BRATS2017, BRATS2018 and BRATS2019. The experimental results show that the proposed algorithm has better or com...

Research paper thumbnail of Cost-sensitive Boosting Pruning Trees for depression detection on Twitter

IEEE Transactions on Affective Computing, 2022

Depression is one of the most common mental health disorders, and a large number of depressed peo... more Depression is one of the most common mental health disorders, and a large number of depressed people commit suicide each year. Potential depression sufferers usually do not consult psychological doctors because they feel ashamed or are unaware of any depression, which may result in severe delay of diagnosis and treatment. In the meantime, evidence shows that social media data provides valuable clues about physical and mental health conditions. In this paper, we argue that it is feasible to identify depression at an early stage by mining online social behaviours. Our approach, which is innovative to the practice of depression detection, does not rely on the extraction of numerous or complicated features to achieve accurate depression detection. Instead, we propose a novel classifier, namely, Cost-sensitive Boosting Pruning Trees (CBPT), which demonstrates a strong classification ability on two publicly accessible Twitter depression detection datasets. To comprehensively evaluate the classification capability of the CBPT, we use additional three datasets from the UCI machine learning repository and the CBPT obtains appealing classification results against several state of the arts boosting algorithms. Finally, we comprehensively explore the influence factors of model prediction, and the results manifest that our proposed framework is promising for identifying Twitter users with depression.

Research paper thumbnail of Spatio-Temporal ECG Network for Detecting Cardiac Disorders from Multi-Lead ECGs

2021 Computing in Cardiology (CinC), 2021

Automatic detection and classification of cardiac disorders play a critical role in the analysis ... more Automatic detection and classification of cardiac disorders play a critical role in the analysis of clinical electrocardiogram (ECG). Deep learning methods are effective for automated feature extraction and have shown promising results in ECG classification. In this work, we proposed a deep spatio-temporal ECG network (ST-ECGNet) to extract robust spatio-temporal features for detecting multiple cardiac disorders from the multi-lead ECG data. The proposed ST-ECGNet combines a Convolutional Neural Network (CNN) module for extracting local spatial features, an attention module for capturing global spatial features, and a Bi-directional Gated Recurrent Unit (Bi-GRU) module for extracting temporal features from ECG data. Specifically, the attention mechanism enables our deep learning architecture to focus on the most important and useful parts of the input to make more accurate predictions. In PhysioNet/Computing in Cardiology Challenge 2021, our deep learning architecture (Team 'Leicester-Fox') achieved the challenge metric scores of 0.414 / 0.417 / 0.427 / 0.434 / 0.419 and accuracy of 0.481 / 0.482 / 0.495 / 0.505 / 0.484 respectively for 12 / 6 / 4 / 3 / 2 ECGlead configurations on the validation dataset. We were not ranked in the challenge because a submission issue with the docker appeared near the deadline.

Research paper thumbnail of Deep Learning Based Brain Tumor Segmentation: A Survey

ArXiv, 2020

Brain tumor segmentation is a challenging problem in medical image analysis. The goal of brain tu... more Brain tumor segmentation is a challenging problem in medical image analysis. The goal of brain tumor segmentation is to generate accurate delineation of brain tumor regions with correctly located masks. In recent years, deep learning methods have shown very promising performance in solving various computer vision problems, such as image classification, object detection and semantic segmentation. A number of deep learning based methods have been applied to brain tumor segmentation and achieved impressive system performance. Considering state-of-the-art technologies and their performance, the purpose of this paper is to provide a comprehensive survey of recently developed deep learning based brain tumor segmentation techniques. The established works included in this survey extensively cover technical aspects such as the strengths and weaknesses of different approaches, pre- and post-processing frameworks, datasets and evaluation metrics. Finally, we conclude this survey by discussing ...

Research paper thumbnail of A Benchmark dataset for both underwater image enhancement and underwater object detection

Underwater image enhancement is such an important vision task due to its significance in marine e... more Underwater image enhancement is such an important vision task due to its significance in marine engineering and aquatic robot. It is usually work as a pre-processing step to improve the performance of high level vision tasks such as underwater object detection. Even though many previous works show the underwater image enhancement algorithms can boost the detection accuracy of the detectors, no work specially focus on investigating the relationship between these two tasks. This is mainly because existing underwater datasets lack either bounding box annotations or high quality reference images, based on which detection accuracy or image quality assessment metrics are calculated. To investigate how the underwater image enhancement methods influence the following underwater object detection tasks, in this paper, we provide a large-scale underwater object detection dataset with both bounding box annotations and high quality reference images, namely OUC dataset. The OUC dataset provides a...

Research paper thumbnail of CANet: Context Aware Network for 3D Brain Tumor Segmentation

ArXiv, 2020

Automated segmentation of brain tumors in 3D magnetic resonance imaging plays an active role in t... more Automated segmentation of brain tumors in 3D magnetic resonance imaging plays an active role in tumor diagnosis, progression monitoring and surgery planning. Based on convolutional neural networks, especially fully convolutional networks, previous studies have shown some promising technologies for brain tumor segmentation. However, these approaches lack suitable strategies to incorporate contextual information to deal with local ambiguities, leading to unsatisfactory segmentation outcomes in challenging circumstances. In this work, we propose a novel Context-Aware Network (CANet) with a Hybrid Context Aware Feature Extractor (HCA-FE) and a Context Guided Attentive Conditional Random Field (CG-ACRF) for feature fusion. HCA-FE captures high dimensional and discriminative features with the contexts from both the convolutional space and feature interaction graphs. We adopt the powerful inference ability of probabilistic graphical models to learn hidden feature maps, and then use CG-ACRF...

Research paper thumbnail of CANet: Context Aware Network for Brain Glioma Segmentation

IEEE Transactions on Medical Imaging, 2021

The version in the Kent Academic Repository may differ from the final published version. Users ar... more The version in the Kent Academic Repository may differ from the final published version. Users are advised to check http://kar.kent.ac.uk for the status of the paper. Users should always cite the published version of record.

Research paper thumbnail of Structured Context Enhancement Network for Mouse Pose Estimation

IEEE Transactions on Circuits and Systems for Video Technology, 2021

Automated analysis of mouse behaviours is crucial for many applications in neuroscience. However,... more Automated analysis of mouse behaviours is crucial for many applications in neuroscience. However, quantifying mouse behaviours from videos or images remains a challenging problem, where pose estimation plays an important role in describing mouse behaviours. Although deep learning based methods have made promising advances in human pose estimation, they cannot be directly applied to pose estimation of mice due to different physiological natures. Particularly, since mouse body is highly deformable, it is a challenge to accurately locate different keypoints on the mouse body. In this paper, we propose a novel Hourglass network based model, namely Graphical Model based Structured Context Enhancement Network (GM-SCENet) where two effective modules, i.e., Structured Context Mixer (SCM) and Cascaded Multi-level Supervision (CMLS) are subsequently implemented. SCM can adaptively learn and enhance the proposed structured context information of each mouse part by a novel graphical model that takes into account the motion difference between body parts. Then, the CMLS module is designed to jointly train the proposed SCM and the Hourglass network by generating multi-level information, increasing the robustness of the whole network. Using the multi-level prediction information from SCM and CMLS, we develop an inference method to ensure the accuracy of the localisation results. Finally, we evaluate our proposed approach against several baselines on our Parkinson's Disease Mouse Behaviour (PDMB) and the standard DeepLabCut Mouse Pose datasets. The experimental results show that our method achieves better or competitive performance against the other state-of-the-art approaches.

Research paper thumbnail of Perceptual Underwater Image Enhancement With Deep Learning and Physical Priors

IEEE Transactions on Circuits and Systems for Video Technology, 2021

Underwater image enhancement, as a pre-processing step to improve the accuracy of the following o... more Underwater image enhancement, as a pre-processing step to improve the accuracy of the following object detection task, has drawn considerable attention in the field of underwater navigation and ocean exploration. However, most of the existing underwater image enhancement strategies tend to consider enhancement and detection as two independent modules with no interaction, and the practice of separate optimization does not always help the underwater object detection task. In this paper, we propose two perceptual enhancement models, each of which uses a deep enhancement model with a detection perceptor. The detection perceptor provides coherent information in the form of gradients to the enhancement model, guiding the enhancement model to generate patch level visually pleasing images or detection favourable images. In addition, due to the lack of training data, a hybrid underwater image synthesis model, which fuses physical priors and data-driven cues, is proposed to synthesize training data and generalise our enhancement model for real-world underwater images. Experimental results show the superiority of our proposed method over several state-of-the-art methods on both real-world and synthetic underwater datasets.

Research paper thumbnail of Underwater object detection using Invert Multi-Class Adaboost with deep learning

2020 International Joint Conference on Neural Networks (IJCNN), 2020

In recent years, deep learning based methods have achieved promising performance in standard obje... more In recent years, deep learning based methods have achieved promising performance in standard object detection. However, these methods lack sufficient capabilities to handle underwater object detection due to these challenges: (1) Objects in real applications are usually small and their images are blurry, and (2) images in the underwater datasets and real applications accompany heterogeneous noise. To address these two problems, we first propose a novel neural network architecture, namely Sample-WeIghted hyPEr Network (SWIPENet), for small object detection. SWIPENet consists of high resolution and semanticrich Hyper Feature Maps which can significantly improve small object detection accuracy. In addition, we propose a novel sampleweighted loss function which can model sample weights for SWIPENet, which uses a novel sample re-weighting algorithm, namely Invert Multi-Class Adaboost (IMA), to reduce the influence of noise on the proposed SWIPENet. Experiments on two underwater robot picking contest datasets URPC2017 and URPC2018 show that the proposed SWIPENet+IMA framework achieves better performance in detection accuracy against several state-of-the-art object detection approaches.

Research paper thumbnail of Underwater object detection using Invert Multi-Class Adaboost with deep learning

2020 International Joint Conference on Neural Networks (IJCNN), 2020

In recent years, deep learning based methods have achieved promising performance in standard obje... more In recent years, deep learning based methods have achieved promising performance in standard object detection. However, these methods lack sufficient capabilities to handle underwater object detection due to these challenges: (1) Objects in real applications are usually small and their images are blurry, and (2) images in the underwater datasets and real applications accompany heterogeneous noise. To address these two problems, we first propose a novel neural network architecture, namely Sample-WeIghted hyPEr Network (SWIPENet), for small object detection. SWIPENet consists of high resolution and semanticrich Hyper Feature Maps which can significantly improve small object detection accuracy. In addition, we propose a novel sampleweighted loss function which can model sample weights for SWIPENet, which uses a novel sample re-weighting algorithm, namely Invert Multi-Class Adaboost (IMA), to reduce the influence of noise on the proposed SWIPENet. Experiments on two underwater robot picking contest datasets URPC2017 and URPC2018 show that the proposed SWIPENet+IMA framework achieves better performance in detection accuracy against several state-of-the-art object detection approaches.

Research paper thumbnail of A Multipopulation-Based Multiobjective Evolutionary Algorithm

IEEE transactions on cybernetics, Jan 5, 2018

Multipopulation is an effective optimization component often embedded into evolutionary algorithm... more Multipopulation is an effective optimization component often embedded into evolutionary algorithms to solve optimization problems. In this paper, a new multipopulation-based multiobjective genetic algorithm (MOGA) is proposed, which uses a unique cross-subpopulation migration process inspired by biological processes to share information between subpopulations. Then, a Markov model of the proposed multipopulation MOGA is derived, the first of its kind, which provides an exact mathematical model for each possible population occurring simultaneously with multiple objectives. Simulation results of two multiobjective test problems with multiple subpopulations justify the derived Markov model, and show that the proposed multipopulation method can improve the optimization ability of the MOGA. Also, the proposed multipopulation method is applied to other multiobjective evolutionary algorithms (MOEAs) for evaluating its performance against the IEEE Congress on Evolutionary Computation multio...

Research paper thumbnail of Detection and Tracking of Multiple Mice Using Part Proposal Networks

ArXiv, 2019

The study of mouse social behaviours has been increasingly undertaken in neuroscience research. H... more The study of mouse social behaviours has been increasingly undertaken in neuroscience research. However, automated quantification of mouse behaviours from the videos of interacting mice is still a challenging problem, where object tracking plays a key role in locating mice in their living spaces. Artificial markers are often applied for multiple mice tracking, which are intrusive and consequently interfere with the movements of mice in a dynamic environment. In this paper, we propose a novel method to continuously track several mice and individual parts without requiring any specific tagging. Firstly, we propose an efficient and robust deep learning based mouse part detection scheme to generate part candidates. Subsequently, we propose a novel Bayesian Integer Linear Programming Model that jointly assigns the part candidates to individual targets with necessary geometric constraints whilst establishing pair-wise association between the detected parts. There is no publicly available ...

Research paper thumbnail of Context-Aware Mouse Behavior Recognition Using Hidden Markov Models

IEEE Transactions on Image Processing, 2019

Research paper thumbnail of Detection and Tracking of Multiple Mice Using Part Proposal Networks

ArXiv, 2019

The study of mouse social behaviours has been increasingly undertaken in neuroscience research. H... more The study of mouse social behaviours has been increasingly undertaken in neuroscience research. However, automated quantification of mouse behaviours from the videos of interacting mice is still a challenging problem, where object tracking plays a key role in locating mice in their living spaces. Artificial markers are often applied for multiple mice tracking, which are intrusive and consequently interfere with the movements of mice in a dynamic environment. In this paper, we propose a novel method to continuously track several mice and individual parts without requiring any specific tagging. Firstly, we propose an efficient and robust deep learning based mouse part detection scheme to generate part candidates. Subsequently, we propose a novel Bayesian Integer Linear Programming Model that jointly assigns the part candidates to individual targets with necessary geometric constraints whilst establishing pair-wise association between the detected parts. There is no publicly available ...

Research paper thumbnail of Diagnostic of Multiple Cardiac Disorders from 12-lead ECGs Using Graph Convolutional Network Based Multi-label Classification

2020 Computing in Cardiology Conference (CinC)

Automated detection and classification of clinical electrocardiogram (ECG) play a critical role i... more Automated detection and classification of clinical electrocardiogram (ECG) play a critical role in the analysis of cardiac disorders. Deep learning is effective for automated feature extraction and has shown promising results in ECG classification. Most of these methods, however, assume that multiple cardiac disorders are mutually exclusive. In this work, we have created and trained a novel deep learning architecture for addressing the multi-label classification of 12-lead ECGs. It contains an ECG representation work for extracting features from raw ECG recordings and a Graph Convolutional Network (GCN) for modelling and capturing label dependencies. In the Phys-ioNet/Computing in Cardiology Challenge 2020, our team, Leicester-Fox, reached a score of 0.627 ± 0.054 using 5fold cross-validation on the full training data.

Research paper thumbnail of Multi-View Mouse Social Behaviour Recognition With Deep Graphic Model

IEEE Transactions on Image Processing

Home-cage social behaviour analysis of mice is an invaluable tool to assess therapeutic efficacy ... more Home-cage social behaviour analysis of mice is an invaluable tool to assess therapeutic efficacy of neurodegenerative diseases. Despite tremendous efforts made within the research community, single-camera video recordings are mainly used for such analysis. Because of the potential to create rich descriptions for mouse social behaviors, the use of multi-view video recordings for rodent observations is increasingly receiving much attention. However, identifying social behaviours from various views is still challenging due to the lack of correspondence across data sources. To address this problem, we here propose a novel multiview latent-attention and dynamic discriminative model that jointly learns view-specific and view-shared sub-structures, where the former captures unique dynamics of each view whilst the latter encodes the interaction between the views. Furthermore, a novel multi-view latent-attention variational autoencoder model is introduced in learning the acquired features, enabling us to learn discriminative features in each view. Experimental results on the standard CRMI13 and our multi-view Parkinson's Disease Mouse Behaviour (PDMB) datasets demonstrate that our proposed model outperforms the other state of the arts technologies, has lower computational cost than the other graphical models and effectively deals with the imbalanced data problem.

Research paper thumbnail of CANet: Context Aware Network for 3D Brain Glioma Segmentation

Automated segmentation of brain glioma plays an active role in diagnosis decision, progression mo... more Automated segmentation of brain glioma plays an active role in diagnosis decision, progression monitoring and surgery planning. Based on deep neural networks, previous studies have shown promising technologies for brain glioma segmentation. However, these approaches lack powerful strategies to incorporate contextual information of tumor cells and their surrounding, which has been proven as a fundamental cue to deal with local ambiguity. In this work, we propose a novel approach named Context-Aware Network (CANet) for brain glioma segmentation. CANet captures high dimensional and discriminative features with contexts from both the convolutional space and feature interaction graphs. We further propose context guided attentive conditional random fields which can selectively aggregate features. We evaluate our method using publicly accessible brain glioma segmentation datasets BRATS2017, BRATS2018 and BRATS2019. The experimental results show that the proposed algorithm has better or com...

Research paper thumbnail of Cost-sensitive Boosting Pruning Trees for depression detection on Twitter

IEEE Transactions on Affective Computing, 2022

Depression is one of the most common mental health disorders, and a large number of depressed peo... more Depression is one of the most common mental health disorders, and a large number of depressed people commit suicide each year. Potential depression sufferers usually do not consult psychological doctors because they feel ashamed or are unaware of any depression, which may result in severe delay of diagnosis and treatment. In the meantime, evidence shows that social media data provides valuable clues about physical and mental health conditions. In this paper, we argue that it is feasible to identify depression at an early stage by mining online social behaviours. Our approach, which is innovative to the practice of depression detection, does not rely on the extraction of numerous or complicated features to achieve accurate depression detection. Instead, we propose a novel classifier, namely, Cost-sensitive Boosting Pruning Trees (CBPT), which demonstrates a strong classification ability on two publicly accessible Twitter depression detection datasets. To comprehensively evaluate the classification capability of the CBPT, we use additional three datasets from the UCI machine learning repository and the CBPT obtains appealing classification results against several state of the arts boosting algorithms. Finally, we comprehensively explore the influence factors of model prediction, and the results manifest that our proposed framework is promising for identifying Twitter users with depression.

Research paper thumbnail of Spatio-Temporal ECG Network for Detecting Cardiac Disorders from Multi-Lead ECGs

2021 Computing in Cardiology (CinC), 2021

Automatic detection and classification of cardiac disorders play a critical role in the analysis ... more Automatic detection and classification of cardiac disorders play a critical role in the analysis of clinical electrocardiogram (ECG). Deep learning methods are effective for automated feature extraction and have shown promising results in ECG classification. In this work, we proposed a deep spatio-temporal ECG network (ST-ECGNet) to extract robust spatio-temporal features for detecting multiple cardiac disorders from the multi-lead ECG data. The proposed ST-ECGNet combines a Convolutional Neural Network (CNN) module for extracting local spatial features, an attention module for capturing global spatial features, and a Bi-directional Gated Recurrent Unit (Bi-GRU) module for extracting temporal features from ECG data. Specifically, the attention mechanism enables our deep learning architecture to focus on the most important and useful parts of the input to make more accurate predictions. In PhysioNet/Computing in Cardiology Challenge 2021, our deep learning architecture (Team 'Leicester-Fox') achieved the challenge metric scores of 0.414 / 0.417 / 0.427 / 0.434 / 0.419 and accuracy of 0.481 / 0.482 / 0.495 / 0.505 / 0.484 respectively for 12 / 6 / 4 / 3 / 2 ECGlead configurations on the validation dataset. We were not ranked in the challenge because a submission issue with the docker appeared near the deadline.

Research paper thumbnail of Deep Learning Based Brain Tumor Segmentation: A Survey

ArXiv, 2020

Brain tumor segmentation is a challenging problem in medical image analysis. The goal of brain tu... more Brain tumor segmentation is a challenging problem in medical image analysis. The goal of brain tumor segmentation is to generate accurate delineation of brain tumor regions with correctly located masks. In recent years, deep learning methods have shown very promising performance in solving various computer vision problems, such as image classification, object detection and semantic segmentation. A number of deep learning based methods have been applied to brain tumor segmentation and achieved impressive system performance. Considering state-of-the-art technologies and their performance, the purpose of this paper is to provide a comprehensive survey of recently developed deep learning based brain tumor segmentation techniques. The established works included in this survey extensively cover technical aspects such as the strengths and weaknesses of different approaches, pre- and post-processing frameworks, datasets and evaluation metrics. Finally, we conclude this survey by discussing ...

Research paper thumbnail of A Benchmark dataset for both underwater image enhancement and underwater object detection

Underwater image enhancement is such an important vision task due to its significance in marine e... more Underwater image enhancement is such an important vision task due to its significance in marine engineering and aquatic robot. It is usually work as a pre-processing step to improve the performance of high level vision tasks such as underwater object detection. Even though many previous works show the underwater image enhancement algorithms can boost the detection accuracy of the detectors, no work specially focus on investigating the relationship between these two tasks. This is mainly because existing underwater datasets lack either bounding box annotations or high quality reference images, based on which detection accuracy or image quality assessment metrics are calculated. To investigate how the underwater image enhancement methods influence the following underwater object detection tasks, in this paper, we provide a large-scale underwater object detection dataset with both bounding box annotations and high quality reference images, namely OUC dataset. The OUC dataset provides a...

Research paper thumbnail of CANet: Context Aware Network for 3D Brain Tumor Segmentation

ArXiv, 2020

Automated segmentation of brain tumors in 3D magnetic resonance imaging plays an active role in t... more Automated segmentation of brain tumors in 3D magnetic resonance imaging plays an active role in tumor diagnosis, progression monitoring and surgery planning. Based on convolutional neural networks, especially fully convolutional networks, previous studies have shown some promising technologies for brain tumor segmentation. However, these approaches lack suitable strategies to incorporate contextual information to deal with local ambiguities, leading to unsatisfactory segmentation outcomes in challenging circumstances. In this work, we propose a novel Context-Aware Network (CANet) with a Hybrid Context Aware Feature Extractor (HCA-FE) and a Context Guided Attentive Conditional Random Field (CG-ACRF) for feature fusion. HCA-FE captures high dimensional and discriminative features with the contexts from both the convolutional space and feature interaction graphs. We adopt the powerful inference ability of probabilistic graphical models to learn hidden feature maps, and then use CG-ACRF...

Research paper thumbnail of CANet: Context Aware Network for Brain Glioma Segmentation

IEEE Transactions on Medical Imaging, 2021

The version in the Kent Academic Repository may differ from the final published version. Users ar... more The version in the Kent Academic Repository may differ from the final published version. Users are advised to check http://kar.kent.ac.uk for the status of the paper. Users should always cite the published version of record.

Research paper thumbnail of Structured Context Enhancement Network for Mouse Pose Estimation

IEEE Transactions on Circuits and Systems for Video Technology, 2021

Automated analysis of mouse behaviours is crucial for many applications in neuroscience. However,... more Automated analysis of mouse behaviours is crucial for many applications in neuroscience. However, quantifying mouse behaviours from videos or images remains a challenging problem, where pose estimation plays an important role in describing mouse behaviours. Although deep learning based methods have made promising advances in human pose estimation, they cannot be directly applied to pose estimation of mice due to different physiological natures. Particularly, since mouse body is highly deformable, it is a challenge to accurately locate different keypoints on the mouse body. In this paper, we propose a novel Hourglass network based model, namely Graphical Model based Structured Context Enhancement Network (GM-SCENet) where two effective modules, i.e., Structured Context Mixer (SCM) and Cascaded Multi-level Supervision (CMLS) are subsequently implemented. SCM can adaptively learn and enhance the proposed structured context information of each mouse part by a novel graphical model that takes into account the motion difference between body parts. Then, the CMLS module is designed to jointly train the proposed SCM and the Hourglass network by generating multi-level information, increasing the robustness of the whole network. Using the multi-level prediction information from SCM and CMLS, we develop an inference method to ensure the accuracy of the localisation results. Finally, we evaluate our proposed approach against several baselines on our Parkinson's Disease Mouse Behaviour (PDMB) and the standard DeepLabCut Mouse Pose datasets. The experimental results show that our method achieves better or competitive performance against the other state-of-the-art approaches.

Research paper thumbnail of Perceptual Underwater Image Enhancement With Deep Learning and Physical Priors

IEEE Transactions on Circuits and Systems for Video Technology, 2021

Underwater image enhancement, as a pre-processing step to improve the accuracy of the following o... more Underwater image enhancement, as a pre-processing step to improve the accuracy of the following object detection task, has drawn considerable attention in the field of underwater navigation and ocean exploration. However, most of the existing underwater image enhancement strategies tend to consider enhancement and detection as two independent modules with no interaction, and the practice of separate optimization does not always help the underwater object detection task. In this paper, we propose two perceptual enhancement models, each of which uses a deep enhancement model with a detection perceptor. The detection perceptor provides coherent information in the form of gradients to the enhancement model, guiding the enhancement model to generate patch level visually pleasing images or detection favourable images. In addition, due to the lack of training data, a hybrid underwater image synthesis model, which fuses physical priors and data-driven cues, is proposed to synthesize training data and generalise our enhancement model for real-world underwater images. Experimental results show the superiority of our proposed method over several state-of-the-art methods on both real-world and synthetic underwater datasets.

Research paper thumbnail of Underwater object detection using Invert Multi-Class Adaboost with deep learning

2020 International Joint Conference on Neural Networks (IJCNN), 2020

In recent years, deep learning based methods have achieved promising performance in standard obje... more In recent years, deep learning based methods have achieved promising performance in standard object detection. However, these methods lack sufficient capabilities to handle underwater object detection due to these challenges: (1) Objects in real applications are usually small and their images are blurry, and (2) images in the underwater datasets and real applications accompany heterogeneous noise. To address these two problems, we first propose a novel neural network architecture, namely Sample-WeIghted hyPEr Network (SWIPENet), for small object detection. SWIPENet consists of high resolution and semanticrich Hyper Feature Maps which can significantly improve small object detection accuracy. In addition, we propose a novel sampleweighted loss function which can model sample weights for SWIPENet, which uses a novel sample re-weighting algorithm, namely Invert Multi-Class Adaboost (IMA), to reduce the influence of noise on the proposed SWIPENet. Experiments on two underwater robot picking contest datasets URPC2017 and URPC2018 show that the proposed SWIPENet+IMA framework achieves better performance in detection accuracy against several state-of-the-art object detection approaches.

Research paper thumbnail of Underwater object detection using Invert Multi-Class Adaboost with deep learning

2020 International Joint Conference on Neural Networks (IJCNN), 2020

In recent years, deep learning based methods have achieved promising performance in standard obje... more In recent years, deep learning based methods have achieved promising performance in standard object detection. However, these methods lack sufficient capabilities to handle underwater object detection due to these challenges: (1) Objects in real applications are usually small and their images are blurry, and (2) images in the underwater datasets and real applications accompany heterogeneous noise. To address these two problems, we first propose a novel neural network architecture, namely Sample-WeIghted hyPEr Network (SWIPENet), for small object detection. SWIPENet consists of high resolution and semanticrich Hyper Feature Maps which can significantly improve small object detection accuracy. In addition, we propose a novel sampleweighted loss function which can model sample weights for SWIPENet, which uses a novel sample re-weighting algorithm, namely Invert Multi-Class Adaboost (IMA), to reduce the influence of noise on the proposed SWIPENet. Experiments on two underwater robot picking contest datasets URPC2017 and URPC2018 show that the proposed SWIPENet+IMA framework achieves better performance in detection accuracy against several state-of-the-art object detection approaches.

Research paper thumbnail of A Multipopulation-Based Multiobjective Evolutionary Algorithm

IEEE transactions on cybernetics, Jan 5, 2018

Multipopulation is an effective optimization component often embedded into evolutionary algorithm... more Multipopulation is an effective optimization component often embedded into evolutionary algorithms to solve optimization problems. In this paper, a new multipopulation-based multiobjective genetic algorithm (MOGA) is proposed, which uses a unique cross-subpopulation migration process inspired by biological processes to share information between subpopulations. Then, a Markov model of the proposed multipopulation MOGA is derived, the first of its kind, which provides an exact mathematical model for each possible population occurring simultaneously with multiple objectives. Simulation results of two multiobjective test problems with multiple subpopulations justify the derived Markov model, and show that the proposed multipopulation method can improve the optimization ability of the MOGA. Also, the proposed multipopulation method is applied to other multiobjective evolutionary algorithms (MOEAs) for evaluating its performance against the IEEE Congress on Evolutionary Computation multio...

Research paper thumbnail of Detection and Tracking of Multiple Mice Using Part Proposal Networks

ArXiv, 2019

The study of mouse social behaviours has been increasingly undertaken in neuroscience research. H... more The study of mouse social behaviours has been increasingly undertaken in neuroscience research. However, automated quantification of mouse behaviours from the videos of interacting mice is still a challenging problem, where object tracking plays a key role in locating mice in their living spaces. Artificial markers are often applied for multiple mice tracking, which are intrusive and consequently interfere with the movements of mice in a dynamic environment. In this paper, we propose a novel method to continuously track several mice and individual parts without requiring any specific tagging. Firstly, we propose an efficient and robust deep learning based mouse part detection scheme to generate part candidates. Subsequently, we propose a novel Bayesian Integer Linear Programming Model that jointly assigns the part candidates to individual targets with necessary geometric constraints whilst establishing pair-wise association between the detected parts. There is no publicly available ...

Research paper thumbnail of Context-Aware Mouse Behavior Recognition Using Hidden Markov Models

IEEE Transactions on Image Processing, 2019

Research paper thumbnail of Detection and Tracking of Multiple Mice Using Part Proposal Networks

ArXiv, 2019

The study of mouse social behaviours has been increasingly undertaken in neuroscience research. H... more The study of mouse social behaviours has been increasingly undertaken in neuroscience research. However, automated quantification of mouse behaviours from the videos of interacting mice is still a challenging problem, where object tracking plays a key role in locating mice in their living spaces. Artificial markers are often applied for multiple mice tracking, which are intrusive and consequently interfere with the movements of mice in a dynamic environment. In this paper, we propose a novel method to continuously track several mice and individual parts without requiring any specific tagging. Firstly, we propose an efficient and robust deep learning based mouse part detection scheme to generate part candidates. Subsequently, we propose a novel Bayesian Integer Linear Programming Model that jointly assigns the part candidates to individual targets with necessary geometric constraints whilst establishing pair-wise association between the detected parts. There is no publicly available ...