Roberto Saldivar | Intituto Tecnologico Superior De Monterrey (original) (raw)

Papers by Roberto Saldivar

Research paper thumbnail of Bio-based materials with novel characteristics for tissue engineering applications – A review

International Journal of Biological Macromolecules, 2017

Recently, a wider spectrum of bio-based materials and materials-based novel constructs and system... more Recently, a wider spectrum of bio-based materials and materials-based novel constructs and systems has been engineered with high interests. The key objective is to help for an enhanced/better quality of life in a secure way by avoiding/limiting various adverse effects of some in practice traditional therapies. In this context, different methodological approaches including in vitro, in vivo, and ex vivo techniques have been exploited, so far. Among them, bio-based therapeutic constructs are of supreme interests for an enhanced and efficient delivery in the current biomedical sector of the modern world. The development of new types of novel, effective and highly reliable materials-based novel constructs for multipurpose applications is essential and a core demand to tackle many human health related diseases. Bio-based materials possess several complementary functionalities, e.g. unique chemical structure, bioactivity, non-toxicity, biocompatibility, biodegradability, recyclability, etc. that position them well in the modern world's materials sector. In this context, the utilization of biomaterials provides extensive opportunities for experimentation in the field of interdisciplinary and multidisciplinary scientific research. With an aim to address the global dependence on petroleum-based polymers, researchers have been redirecting their interests to the engineering of biological materials for targeted applications in different industries including cosmetics, pharmaceuticals, and other biotechnological or biomedical applications. Herein, we reviewed biotechnological advancements at large and tissue engineering from a biomaterials perspective in particular and envision directions of future developments.

Research paper thumbnail of Immobilized ligninolytic enzymes: An innovative and environmental responsive technology to tackle dye-based industrial pollutants - A review

The Science of the total environment, Jan 15, 2017

In the twenty-first century, chemical and associated industries quest a transition prototype from... more In the twenty-first century, chemical and associated industries quest a transition prototype from traditional chemical-based concepts to a greener, sustainable and environmentally-friendlier catalytic alternative, both at the laboratory and industrial scale. In this context, bio-based catalysis offers numerous benefits along with potential biotechnological and environmental applications. The bio-based catalytic processes are energy efficient than conventional methodologies under moderate processing, generating no and negligible secondary waste pollution. Thanks to key scientific advances, now, solid-phase biocatalysts can be economically tailored on a large scale. Nevertheless, it is mandatory to recover and reprocess the enzyme for their commercial feasibility, and immobilization engineering can efficiently accomplish this challenge. The first part of the present review work briefly outlines the immobilization of lignin-modifying enzymes (LMEs) including lignin peroxidase (LiP), ma...

Research paper thumbnail of Advancement of Green Process Through Microwave-Assisted Extraction of Bioactive Metabolites from Arthrospira Platensis and Bioactivity Evaluation

Bioresource Technology, 2016

Bioactivity and functional properties of cyanobacterial extract mostly depends on process of extr... more Bioactivity and functional properties of cyanobacterial extract mostly depends on process of extraction, temperature and solvent used (polar or non-polar). To evaluate these parameters a design of experiment (DOE; using a 2(k) design) was performed with Arthrospira platensis. Extraction process was optimized through microwave-assisted extraction considering solvent ratio, temperature and time of extraction with polar (PS) and non-polar (NPS). Maximum extract yield obtained was 4.32±0.25% and 5.26±0.11% (w/w) respectively for PS and NPS. Maximum content of bioactive metabolites in PS extracts were thiamine (846.57±14.12μg/g), riboflavin (101.09±1.63μg/g), C-phycocyanin (2.28±0.10μg/g) and A-phycocyanin (4.11±0.03μg/g), while for NPS extracts were α-tocopherol (37.86±0.78μg/g), β-carotene (123.64±1.45μg/g) and 19.44±0.21mg/g of fatty acids. A. platensis PS extracts showed high antimicrobial activity and PS extracts had antioxidant activity of 0.79±0.12μmolTE/g for FRAP assay, while for NPS extracts 1.03±0.08μmol α-TE/g for FRAP assay.

Research paper thumbnail of Nutrients utilization and contaminants removal. A review of two approaches of algae and cyanobacteria in wastewater

Research paper thumbnail of Identification of Bioactivity, Volatile and Fatty Acid Profile in Supercritical Fluid Extracts of Mexican arnica

International Journal of Molecular Sciences, 2016

Supercritical fluid extraction (SFE) is a sustainable technique used for the extraction of lipoph... more Supercritical fluid extraction (SFE) is a sustainable technique used for the extraction of lipophilic metabolites such as pigments and fatty acids. Arnica plant is considered a potential candidate material with high antioxidant and antimicrobial activities. Therefore, in this study, a locally available Heterotheca inuloides, also known as Mexican arnica, was analyzed for the extraction of high-value compounds. Based on different pressure (P), temperature (T), and co-solvent (CoS), four treatments (T) were prepared. A maximum 7.13% yield was recovered from T2 (T = 60 °C, P = 10 MPa, CoS = 8 g/min), followed by 6.69% from T4 (T = 60 °C, P = 30 MPa, CoS = 4 g/min). Some bioactive sesquiterpenoids such as 7-hydroxycadalene, caryophyllene and δ-cadinene were identified in the extracts by GC/MS. The fatty acid profile revealed that the main components were palmitic acid (C16:0), followed by linoleic acid (C18:2ω6c), α-linolenic acid (C18:3ω3) and stearic acid (C18:0) differing in percent yield per treatment. Antibacterial activities were determined by the agar diffusion method, indicating that all the treatments exerted strong antibacterial activity against S. aureus, C. albicans, and E. coli strains. The antioxidant capacity of the extracts was also measured by three in vitro assays, DPPH, TEAC and FRAP, using Trolox as a standard. Results showed high antioxidant capacity enabling pharmaceutical applications of Mexican arnica.

Research paper thumbnail of Phycobiliproteins: A Novel Green Tool from Marine Origin Blue-Green Algae and Red Algae

Protein and peptide letters, Jan 2, 2016

Marine species are comprising about a half of the whole global biodiversity; the sea offers an en... more Marine species are comprising about a half of the whole global biodiversity; the sea offers an enormous resource for novel bioactive compounds. Several of the marine origin species show multifunctional bioactivities and characteristics that are useful for a discovery and/or reinvention of biologically active compounds. For millennia, marine species that includes cyanobacteria (blue-green algae) and red algae have been targeted to explore their enormous potential candidature status along with a wider spectrum of novel applications in bio- and non-bio sectors of the modern world. Among them, cyanobacteria are photosynthetic prokaryotes, phylogenetically a primitive group of Gram-negative prokaryotes, ranging from Arctic to Antarctic regions, capable of carrying out photosynthesis and nitrogen fixation. In the recent decade, a great deal of research attention has been paid on the pronouncement of bio-functional proteins along with novel peptides, vitamins, fine chemicals, renewable fue...

Research paper thumbnail of Production of biodiesel and catalysts for transesterification: A review

Research paper thumbnail of Content Category Scoring for Nodes in a Linked Database

Research paper thumbnail of Client-Side Access Control of Electronic Content

Research paper thumbnail of Bioelectrochemical study of thermostable Pycnoporus sanguineus CS43 laccase bioelectrodes based on pyrolytic carbon nanofiber for bioelectrocatalytic O2 reduction

ACS Catalysis, 2015

In this study, the bioelectrocatalytic reduction of molecular oxygen by two highly thermostable l... more In this study, the bioelectrocatalytic reduction of molecular oxygen by two highly thermostable laccase isoforms from a native strain of Pycnoporus sanguineus CS43 were evaluated and compared to commercially available laccase from Trametes versicolor (TvL). The laccase isoforms (LAC1 and LAC2) and TvL laccase were immobilized by orientation onto anthracene-modified multiwalled carbon nanotubes (AC-MWCNT), which were subsequently immobilized onto carbon nanofiber mat electrodes fabricated using a carbon MEMS (C-MEMS) process. The performances of the isoforms were evaluated at differing pHs, temperatures, and with various inhibitors under hydrodynamic and hydrostatic conditions. Both LAC1 and LAC2 had onset potentials of over +650 mV vs Ag/AgCl at pH 4.0, which are among the highest reported to date for any laccase bioelectrode. High current densities were also obtained, producing 825 ± 88 μA/cm2 and 1220 ± 106 μA/cm2 with LAC1 and LAC2, respectively. The bioelectrodes also demonstrated remarkable operational ranges in pH and temperature as well as increased resistance to common laccase inhibitors. In both cases, they maintained over 70% of their maximum current densities after 12 h of continuous operation at 20 °C and over 20% of their maximum current densities after 6 h of continuous operation at 45 °C. In comparison, the TvL cathodes maintained 50% of their maximum current densities after 12 h at 20 °C and lost all catalytic activity after 2 h at 45 °C. The high stability, onset potential, current densities, and increased inhibitor resilience demonstrated by the results of this study make these isoforms very attractive for applications such as biofuel cell cathodes.

Research paper thumbnail of Método Para Evaluar La Factibilidad De Uso De Suelo Agrícola Como Reactor Para Tratamiento Natural Alternativo De Aguas Residuales Industriales

Research paper thumbnail of Effects of light intensity and carbon dioxide on lipids and fatty acids produced by Synechocystis sp. PCC6803 during continuous flow

Research paper thumbnail of Extraction and purification of high-value metabolites from microalgae: essential lipids, astaxanthin and phycobiliproteins

Microbial Biotechnology, 2014

The marked trend and consumers growing interest in natural and healthy products have forced resea... more The marked trend and consumers growing interest in natural and healthy products have forced researches and industry to develop novel products with functional ingredients. Microalgae have been recognized as source of functional ingredients with positive health effects since these microorganisms produce polyunsaturated fatty acids, polysaccharides, natural pigments, essential minerals, vitamins, enzymes and bioactive peptides. For this reason, the manuscript reviews two of the main high-value metabolites which can be obtained from microalgae: pigments and essential lipids. Therefore, the extraction and purification methods for polyunsaturated fatty acids, astaxanthin, phycoerythrin and phycocyanin are described. Also, the effect that environmental growth conditions have in the production of these metabolites is described. This review summarizes the existing methods to extract and purify such metabolites in order to develop a feasible and sustainable algae industry.

Research paper thumbnail of Time and cost efficient biodegradation of diesel in a continuous-upflow packed bed biofilm reactor and effect of surfactant GAELE

Journal of Chemical Technology & Biotechnology, 2012

... Luz Maria Martinez 2 ,; Marcelo Videa 2 ,; Roberto Parra-Saldivar 3. ... Rittmann andMcCarty2... more ... Luz Maria Martinez 2 ,; Marcelo Videa 2 ,; Roberto Parra-Saldivar 3. ... Rittmann andMcCarty23 showed that as the concentration of acetate, supplied as primary substrate, decreased along the length of the column, so did the biofilm thickness. ...

Research paper thumbnail of Implications of chloride-enhanced cadmium uptake in saline agriculture: modeling cadmium uptake by maize and tobacco. (2012). Int J Environ Sci Technol, 9:69-77

Chloride salinity has been strongly related to enhanced cadmium (Cd) uptake by plants due to incr... more Chloride salinity has been strongly related to enhanced cadmium (Cd) uptake by plants due to increased solubility in the soil solution, even in agricultural soil with very low levels of cadmium. This finding is relevant because the cadmium content of food crops is an important concern for human health. Therefore, the aim of this study was to predict and discuss the chlorine-enhanced uptake of cadmium by two common crops: maize and tobacco under ''non-saline'' (1 mM) and ''very strongly saline'' (200 mM) scenarios using a modified 'biotic ligand model' and datasets from a set of soil and hydroponic experiments. Results indicated that predicted cadmium uptake rates (expressed as cadmium in plant lmol m -2 root) by maize and tobacco plants were consistently higher (54 and 15%, respectively) assuming conditions of 'very strong salinity' soil compared to the simulated 'non-saline' soil. In the light of the results of the present research, valuable information is given on modeled cadmium phytoavailability as an indication of the potential risk due to increased cadmium uptake by crops under saline conditions, especially as the enhancement of cadmium uptake in the presence of Clsalinity may be a general trend that occurs in many edible crops. The biotic ligand model parameterization applied in the present study attempted to simulate conditions commonly found in natural cadmium and salt-affected soils. However, caution is needed to extrapolate results obtained from these models to real soil conditions.

Research paper thumbnail of Purification and characterization of two thermostable xylanases from Malbranchea flava active under alkaline conditions

Bioresource Technology, 2010

Two xylanases, MFX I and MFX II, from the thermophilic fungus Malbranchea flava MTCC 4889 with mo... more Two xylanases, MFX I and MFX II, from the thermophilic fungus Malbranchea flava MTCC 4889 with molecular masses of 25.2 and 30 kDa and pIs of 4.5 and 3.7, respectively were purified to homogeneity. The xylanases were optimally active at pH 9.0 and at 60°C, exhibited a half-life of 4 h at 60°C, and showed distinct mode of action and product profiles when applied to birchwood, oat spelt, and larchwood xylan, and to wheat and rye arabinoxylan. The xylanases were most active on larchwood xylan with K m values of 1.25 and 3.7 mg/ml. K cat /K m values suggested that the xylanases preferentially hydrolyzed rye arabinoxylan. LC-MS/MS (liquid chromatography/mass spectrometry) analysis of tryptic digests of MFX I and MFX II revealed similarity with known fungal xylanases and suggests that that they belonged to the GH 11 and 10 glycosyl hydrolase super families, respectively. These xylanases can potentially be used in enzyme-assisted bleaching of the pulp derived from agro-residues, as well as production of xylooligosaccharides for pre-biotic functional food applications.

Research paper thumbnail of Mahlknecht J., Pastén-Zapata E., Ledesma-Ruiz R., Ramírez A.I., Harter T., Parra R (2015) Investigation of geochemical evolution of groundwater under agricultural land: a case study in northeastern Mexico. Journal of Hydrology.  521:410-423.

Zona Citrícola is an important area for Mexico due to its citriculture activity. Situated in a su... more Zona Citrícola is an important area for Mexico due to its citriculture activity. Situated in a sub-humid to humid climate adjacent to the Sierra Madre Oriental, this valley hosts an aquifer system that represents sequences of shales, marls, conglomerates, and alluvial deposits. Groundwater flows from mountainous recharge areas to the basin-fill deposits and provides base flows to supply drinking water to the adjacent metropolitan area of Monterrey. Recent studies examining the groundwater quality of the study area urge the mitigation of groundwater pollution. The objective of this study was to characterize the physical and chemical properties of the groundwater and to assess the processes controlling the groundwater's chemistry. Correlation was used to identify associations among various geochemical constituents. Factor analysis was applied to identify the water's chemical characteristics that were responsible for generating most of the variability within the dataset. Hierarchical cluster analysis was employed in combination with a post-hoc analysis of variance to partition the water samples into hydrochemical water groups: recharge waters (Ca-HCO 3 ), transition zone waters (Ca-HCO 3 -SO 4 to Ca-SO 4 -HCO 3 ) and discharge waters (Ca-SO 4 ). Inverse geochemical models of these groups were developed and constrained using PHREEQC to elucidate the chemical reactions controlling the water's chemistry between an initial (recharge) and final water. The primary reactions contributing to salinity were the following: (1) water-rock interactions, including the weathering of evaporitic rocks and dedolomitization; (2) dissolution of soil gas carbon dioxide; and (3) input from animal/human wastewater and manure in combination with by denitrification processes. Contributions from silicate weathering to salinity ranged from less important to insignificant. The findings suggest that it may not be cost-effective to regulate manure application to mitigate groundwater pollution.

Research paper thumbnail of Alemán-Nava G.S., Meneses-Jácome  A., Cárdenas-Chávez D.L, Díaz-Chavez R., Scarlat N., Dallemand J-F, Ornelas-Soto N., Garcia-Arrazola., Parra R (2015). Bioenergy in México: Status and Perspective. Journal Biofuels, Bioproducts and Biorefining. 9:8–20

Mexico's government has introduced a Law on Climate Change that is unique worldwide; it establish... more Mexico's government has introduced a Law on Climate Change that is unique worldwide; it establishes targets for greenhouse gases reductions at the same level of developed countries despite being an emerging country. This reform represents a crucial challenge for the electrical and transport sectors largely dependent on fossil energy since Mexico is the ninth-largest oil producer in the world. Local industry and academic sectors are called to lead the introduction of renewable energy sources, and particularly to enhance the share of energy from biomass in the local energy basket. Thus, this paper outlines the baseline on regulatory, energy, and carbon markets, and the scientifi c capacity to increase bioenergy utilization in Mexico. Furthermore, it opens a discussion about the steps forward with regard to sustainability and research needs, emphasizing some priorities and principles to develop a bioenergy system environmentally compatible in this country.

Research paper thumbnail of Cuellar-Bermudez S.P., Aguilar-Hernandez I.A., Cardenas-Chavez D.L., Ornelas-Soto N., Romero‑Owaga M.A., Parra R (2014) Extraction and purification of high-value metabolites form microalgae: essential lipids, astaxanthin and phycobiliproteins. Microbial Biotechnology.

The marked trend and consumers growing interest in natural and healthy products have forced resea... more The marked trend and consumers growing interest in natural and healthy products have forced researches and industry to develop novel products with functional ingredients. Microalgae have been recognized as source of functional ingredients with positive health effects since these microorganisms produce polyunsaturated fatty acids, polysaccharides, natural pigments, essential minerals, vitamins, enzymes and bioactive peptides. For this reason, the manuscript reviews two of the main high-value metabolites which can be obtained from microalgae: pigments and essential lipids. Therefore, the extraction and purification methods for polyunsaturated fatty acids, astaxanthin, phycoerythrin and phycocyanin are described. Also, the effect that environmental growth conditions have in the production of these metabolites is described. This review summarizes the existing methods to extract and purify such metabolites in order to develop a feasible and sustainable algae industry.

Research paper thumbnail of Medina A., Schmidt-Heydt M., Rodríguez A., Parra R., Geisen R and Magan N (2014) Environmental stress impacts on growth, secondary metabolite biosynthetic gene clusters and metabolite production. Current Genetics

salt (0.87 a w = 22 % NaCl) niche such as cured meats, and produces ochratoxin A (OTA). There is ... more salt (0.87 a w = 22 % NaCl) niche such as cured meats, and produces ochratoxin A (OTA). There is differential and temporal expression of the genes in the secondary metabolite clusters in response to a w × temperature stress. We have used a microarray and integrated data on growth, relative expression of key genes in the biosynthetic pathways for secondary metabolite production and toxin production using a mixed growth model. This was used to correlate these factors and predict the toxin levels produced under different abiotic stress conditions. This system approach to integrate these different data sets and model the relationships could be a powerful tool for predicting the relative toxin production under extreme stress conditions, including climate change scenarios. This approach will facilitate a better functional understanding of the influence that environmental stress has on these mycotoxigenic fungi and enable better prevention strategies to be developed based on this system-based approach.

Research paper thumbnail of Bio-based materials with novel characteristics for tissue engineering applications – A review

International Journal of Biological Macromolecules, 2017

Recently, a wider spectrum of bio-based materials and materials-based novel constructs and system... more Recently, a wider spectrum of bio-based materials and materials-based novel constructs and systems has been engineered with high interests. The key objective is to help for an enhanced/better quality of life in a secure way by avoiding/limiting various adverse effects of some in practice traditional therapies. In this context, different methodological approaches including in vitro, in vivo, and ex vivo techniques have been exploited, so far. Among them, bio-based therapeutic constructs are of supreme interests for an enhanced and efficient delivery in the current biomedical sector of the modern world. The development of new types of novel, effective and highly reliable materials-based novel constructs for multipurpose applications is essential and a core demand to tackle many human health related diseases. Bio-based materials possess several complementary functionalities, e.g. unique chemical structure, bioactivity, non-toxicity, biocompatibility, biodegradability, recyclability, etc. that position them well in the modern world's materials sector. In this context, the utilization of biomaterials provides extensive opportunities for experimentation in the field of interdisciplinary and multidisciplinary scientific research. With an aim to address the global dependence on petroleum-based polymers, researchers have been redirecting their interests to the engineering of biological materials for targeted applications in different industries including cosmetics, pharmaceuticals, and other biotechnological or biomedical applications. Herein, we reviewed biotechnological advancements at large and tissue engineering from a biomaterials perspective in particular and envision directions of future developments.

Research paper thumbnail of Immobilized ligninolytic enzymes: An innovative and environmental responsive technology to tackle dye-based industrial pollutants - A review

The Science of the total environment, Jan 15, 2017

In the twenty-first century, chemical and associated industries quest a transition prototype from... more In the twenty-first century, chemical and associated industries quest a transition prototype from traditional chemical-based concepts to a greener, sustainable and environmentally-friendlier catalytic alternative, both at the laboratory and industrial scale. In this context, bio-based catalysis offers numerous benefits along with potential biotechnological and environmental applications. The bio-based catalytic processes are energy efficient than conventional methodologies under moderate processing, generating no and negligible secondary waste pollution. Thanks to key scientific advances, now, solid-phase biocatalysts can be economically tailored on a large scale. Nevertheless, it is mandatory to recover and reprocess the enzyme for their commercial feasibility, and immobilization engineering can efficiently accomplish this challenge. The first part of the present review work briefly outlines the immobilization of lignin-modifying enzymes (LMEs) including lignin peroxidase (LiP), ma...

Research paper thumbnail of Advancement of Green Process Through Microwave-Assisted Extraction of Bioactive Metabolites from Arthrospira Platensis and Bioactivity Evaluation

Bioresource Technology, 2016

Bioactivity and functional properties of cyanobacterial extract mostly depends on process of extr... more Bioactivity and functional properties of cyanobacterial extract mostly depends on process of extraction, temperature and solvent used (polar or non-polar). To evaluate these parameters a design of experiment (DOE; using a 2(k) design) was performed with Arthrospira platensis. Extraction process was optimized through microwave-assisted extraction considering solvent ratio, temperature and time of extraction with polar (PS) and non-polar (NPS). Maximum extract yield obtained was 4.32±0.25% and 5.26±0.11% (w/w) respectively for PS and NPS. Maximum content of bioactive metabolites in PS extracts were thiamine (846.57±14.12μg/g), riboflavin (101.09±1.63μg/g), C-phycocyanin (2.28±0.10μg/g) and A-phycocyanin (4.11±0.03μg/g), while for NPS extracts were α-tocopherol (37.86±0.78μg/g), β-carotene (123.64±1.45μg/g) and 19.44±0.21mg/g of fatty acids. A. platensis PS extracts showed high antimicrobial activity and PS extracts had antioxidant activity of 0.79±0.12μmolTE/g for FRAP assay, while for NPS extracts 1.03±0.08μmol α-TE/g for FRAP assay.

Research paper thumbnail of Nutrients utilization and contaminants removal. A review of two approaches of algae and cyanobacteria in wastewater

Research paper thumbnail of Identification of Bioactivity, Volatile and Fatty Acid Profile in Supercritical Fluid Extracts of Mexican arnica

International Journal of Molecular Sciences, 2016

Supercritical fluid extraction (SFE) is a sustainable technique used for the extraction of lipoph... more Supercritical fluid extraction (SFE) is a sustainable technique used for the extraction of lipophilic metabolites such as pigments and fatty acids. Arnica plant is considered a potential candidate material with high antioxidant and antimicrobial activities. Therefore, in this study, a locally available Heterotheca inuloides, also known as Mexican arnica, was analyzed for the extraction of high-value compounds. Based on different pressure (P), temperature (T), and co-solvent (CoS), four treatments (T) were prepared. A maximum 7.13% yield was recovered from T2 (T = 60 °C, P = 10 MPa, CoS = 8 g/min), followed by 6.69% from T4 (T = 60 °C, P = 30 MPa, CoS = 4 g/min). Some bioactive sesquiterpenoids such as 7-hydroxycadalene, caryophyllene and δ-cadinene were identified in the extracts by GC/MS. The fatty acid profile revealed that the main components were palmitic acid (C16:0), followed by linoleic acid (C18:2ω6c), α-linolenic acid (C18:3ω3) and stearic acid (C18:0) differing in percent yield per treatment. Antibacterial activities were determined by the agar diffusion method, indicating that all the treatments exerted strong antibacterial activity against S. aureus, C. albicans, and E. coli strains. The antioxidant capacity of the extracts was also measured by three in vitro assays, DPPH, TEAC and FRAP, using Trolox as a standard. Results showed high antioxidant capacity enabling pharmaceutical applications of Mexican arnica.

Research paper thumbnail of Phycobiliproteins: A Novel Green Tool from Marine Origin Blue-Green Algae and Red Algae

Protein and peptide letters, Jan 2, 2016

Marine species are comprising about a half of the whole global biodiversity; the sea offers an en... more Marine species are comprising about a half of the whole global biodiversity; the sea offers an enormous resource for novel bioactive compounds. Several of the marine origin species show multifunctional bioactivities and characteristics that are useful for a discovery and/or reinvention of biologically active compounds. For millennia, marine species that includes cyanobacteria (blue-green algae) and red algae have been targeted to explore their enormous potential candidature status along with a wider spectrum of novel applications in bio- and non-bio sectors of the modern world. Among them, cyanobacteria are photosynthetic prokaryotes, phylogenetically a primitive group of Gram-negative prokaryotes, ranging from Arctic to Antarctic regions, capable of carrying out photosynthesis and nitrogen fixation. In the recent decade, a great deal of research attention has been paid on the pronouncement of bio-functional proteins along with novel peptides, vitamins, fine chemicals, renewable fue...

Research paper thumbnail of Production of biodiesel and catalysts for transesterification: A review

Research paper thumbnail of Content Category Scoring for Nodes in a Linked Database

Research paper thumbnail of Client-Side Access Control of Electronic Content

Research paper thumbnail of Bioelectrochemical study of thermostable Pycnoporus sanguineus CS43 laccase bioelectrodes based on pyrolytic carbon nanofiber for bioelectrocatalytic O2 reduction

ACS Catalysis, 2015

In this study, the bioelectrocatalytic reduction of molecular oxygen by two highly thermostable l... more In this study, the bioelectrocatalytic reduction of molecular oxygen by two highly thermostable laccase isoforms from a native strain of Pycnoporus sanguineus CS43 were evaluated and compared to commercially available laccase from Trametes versicolor (TvL). The laccase isoforms (LAC1 and LAC2) and TvL laccase were immobilized by orientation onto anthracene-modified multiwalled carbon nanotubes (AC-MWCNT), which were subsequently immobilized onto carbon nanofiber mat electrodes fabricated using a carbon MEMS (C-MEMS) process. The performances of the isoforms were evaluated at differing pHs, temperatures, and with various inhibitors under hydrodynamic and hydrostatic conditions. Both LAC1 and LAC2 had onset potentials of over +650 mV vs Ag/AgCl at pH 4.0, which are among the highest reported to date for any laccase bioelectrode. High current densities were also obtained, producing 825 ± 88 μA/cm2 and 1220 ± 106 μA/cm2 with LAC1 and LAC2, respectively. The bioelectrodes also demonstrated remarkable operational ranges in pH and temperature as well as increased resistance to common laccase inhibitors. In both cases, they maintained over 70% of their maximum current densities after 12 h of continuous operation at 20 °C and over 20% of their maximum current densities after 6 h of continuous operation at 45 °C. In comparison, the TvL cathodes maintained 50% of their maximum current densities after 12 h at 20 °C and lost all catalytic activity after 2 h at 45 °C. The high stability, onset potential, current densities, and increased inhibitor resilience demonstrated by the results of this study make these isoforms very attractive for applications such as biofuel cell cathodes.

Research paper thumbnail of Método Para Evaluar La Factibilidad De Uso De Suelo Agrícola Como Reactor Para Tratamiento Natural Alternativo De Aguas Residuales Industriales

Research paper thumbnail of Effects of light intensity and carbon dioxide on lipids and fatty acids produced by Synechocystis sp. PCC6803 during continuous flow

Research paper thumbnail of Extraction and purification of high-value metabolites from microalgae: essential lipids, astaxanthin and phycobiliproteins

Microbial Biotechnology, 2014

The marked trend and consumers growing interest in natural and healthy products have forced resea... more The marked trend and consumers growing interest in natural and healthy products have forced researches and industry to develop novel products with functional ingredients. Microalgae have been recognized as source of functional ingredients with positive health effects since these microorganisms produce polyunsaturated fatty acids, polysaccharides, natural pigments, essential minerals, vitamins, enzymes and bioactive peptides. For this reason, the manuscript reviews two of the main high-value metabolites which can be obtained from microalgae: pigments and essential lipids. Therefore, the extraction and purification methods for polyunsaturated fatty acids, astaxanthin, phycoerythrin and phycocyanin are described. Also, the effect that environmental growth conditions have in the production of these metabolites is described. This review summarizes the existing methods to extract and purify such metabolites in order to develop a feasible and sustainable algae industry.

Research paper thumbnail of Time and cost efficient biodegradation of diesel in a continuous-upflow packed bed biofilm reactor and effect of surfactant GAELE

Journal of Chemical Technology & Biotechnology, 2012

... Luz Maria Martinez 2 ,; Marcelo Videa 2 ,; Roberto Parra-Saldivar 3. ... Rittmann andMcCarty2... more ... Luz Maria Martinez 2 ,; Marcelo Videa 2 ,; Roberto Parra-Saldivar 3. ... Rittmann andMcCarty23 showed that as the concentration of acetate, supplied as primary substrate, decreased along the length of the column, so did the biofilm thickness. ...

Research paper thumbnail of Implications of chloride-enhanced cadmium uptake in saline agriculture: modeling cadmium uptake by maize and tobacco. (2012). Int J Environ Sci Technol, 9:69-77

Chloride salinity has been strongly related to enhanced cadmium (Cd) uptake by plants due to incr... more Chloride salinity has been strongly related to enhanced cadmium (Cd) uptake by plants due to increased solubility in the soil solution, even in agricultural soil with very low levels of cadmium. This finding is relevant because the cadmium content of food crops is an important concern for human health. Therefore, the aim of this study was to predict and discuss the chlorine-enhanced uptake of cadmium by two common crops: maize and tobacco under ''non-saline'' (1 mM) and ''very strongly saline'' (200 mM) scenarios using a modified 'biotic ligand model' and datasets from a set of soil and hydroponic experiments. Results indicated that predicted cadmium uptake rates (expressed as cadmium in plant lmol m -2 root) by maize and tobacco plants were consistently higher (54 and 15%, respectively) assuming conditions of 'very strong salinity' soil compared to the simulated 'non-saline' soil. In the light of the results of the present research, valuable information is given on modeled cadmium phytoavailability as an indication of the potential risk due to increased cadmium uptake by crops under saline conditions, especially as the enhancement of cadmium uptake in the presence of Clsalinity may be a general trend that occurs in many edible crops. The biotic ligand model parameterization applied in the present study attempted to simulate conditions commonly found in natural cadmium and salt-affected soils. However, caution is needed to extrapolate results obtained from these models to real soil conditions.

Research paper thumbnail of Purification and characterization of two thermostable xylanases from Malbranchea flava active under alkaline conditions

Bioresource Technology, 2010

Two xylanases, MFX I and MFX II, from the thermophilic fungus Malbranchea flava MTCC 4889 with mo... more Two xylanases, MFX I and MFX II, from the thermophilic fungus Malbranchea flava MTCC 4889 with molecular masses of 25.2 and 30 kDa and pIs of 4.5 and 3.7, respectively were purified to homogeneity. The xylanases were optimally active at pH 9.0 and at 60°C, exhibited a half-life of 4 h at 60°C, and showed distinct mode of action and product profiles when applied to birchwood, oat spelt, and larchwood xylan, and to wheat and rye arabinoxylan. The xylanases were most active on larchwood xylan with K m values of 1.25 and 3.7 mg/ml. K cat /K m values suggested that the xylanases preferentially hydrolyzed rye arabinoxylan. LC-MS/MS (liquid chromatography/mass spectrometry) analysis of tryptic digests of MFX I and MFX II revealed similarity with known fungal xylanases and suggests that that they belonged to the GH 11 and 10 glycosyl hydrolase super families, respectively. These xylanases can potentially be used in enzyme-assisted bleaching of the pulp derived from agro-residues, as well as production of xylooligosaccharides for pre-biotic functional food applications.

Research paper thumbnail of Mahlknecht J., Pastén-Zapata E., Ledesma-Ruiz R., Ramírez A.I., Harter T., Parra R (2015) Investigation of geochemical evolution of groundwater under agricultural land: a case study in northeastern Mexico. Journal of Hydrology.  521:410-423.

Zona Citrícola is an important area for Mexico due to its citriculture activity. Situated in a su... more Zona Citrícola is an important area for Mexico due to its citriculture activity. Situated in a sub-humid to humid climate adjacent to the Sierra Madre Oriental, this valley hosts an aquifer system that represents sequences of shales, marls, conglomerates, and alluvial deposits. Groundwater flows from mountainous recharge areas to the basin-fill deposits and provides base flows to supply drinking water to the adjacent metropolitan area of Monterrey. Recent studies examining the groundwater quality of the study area urge the mitigation of groundwater pollution. The objective of this study was to characterize the physical and chemical properties of the groundwater and to assess the processes controlling the groundwater's chemistry. Correlation was used to identify associations among various geochemical constituents. Factor analysis was applied to identify the water's chemical characteristics that were responsible for generating most of the variability within the dataset. Hierarchical cluster analysis was employed in combination with a post-hoc analysis of variance to partition the water samples into hydrochemical water groups: recharge waters (Ca-HCO 3 ), transition zone waters (Ca-HCO 3 -SO 4 to Ca-SO 4 -HCO 3 ) and discharge waters (Ca-SO 4 ). Inverse geochemical models of these groups were developed and constrained using PHREEQC to elucidate the chemical reactions controlling the water's chemistry between an initial (recharge) and final water. The primary reactions contributing to salinity were the following: (1) water-rock interactions, including the weathering of evaporitic rocks and dedolomitization; (2) dissolution of soil gas carbon dioxide; and (3) input from animal/human wastewater and manure in combination with by denitrification processes. Contributions from silicate weathering to salinity ranged from less important to insignificant. The findings suggest that it may not be cost-effective to regulate manure application to mitigate groundwater pollution.

Research paper thumbnail of Alemán-Nava G.S., Meneses-Jácome  A., Cárdenas-Chávez D.L, Díaz-Chavez R., Scarlat N., Dallemand J-F, Ornelas-Soto N., Garcia-Arrazola., Parra R (2015). Bioenergy in México: Status and Perspective. Journal Biofuels, Bioproducts and Biorefining. 9:8–20

Mexico's government has introduced a Law on Climate Change that is unique worldwide; it establish... more Mexico's government has introduced a Law on Climate Change that is unique worldwide; it establishes targets for greenhouse gases reductions at the same level of developed countries despite being an emerging country. This reform represents a crucial challenge for the electrical and transport sectors largely dependent on fossil energy since Mexico is the ninth-largest oil producer in the world. Local industry and academic sectors are called to lead the introduction of renewable energy sources, and particularly to enhance the share of energy from biomass in the local energy basket. Thus, this paper outlines the baseline on regulatory, energy, and carbon markets, and the scientifi c capacity to increase bioenergy utilization in Mexico. Furthermore, it opens a discussion about the steps forward with regard to sustainability and research needs, emphasizing some priorities and principles to develop a bioenergy system environmentally compatible in this country.

Research paper thumbnail of Cuellar-Bermudez S.P., Aguilar-Hernandez I.A., Cardenas-Chavez D.L., Ornelas-Soto N., Romero‑Owaga M.A., Parra R (2014) Extraction and purification of high-value metabolites form microalgae: essential lipids, astaxanthin and phycobiliproteins. Microbial Biotechnology.

The marked trend and consumers growing interest in natural and healthy products have forced resea... more The marked trend and consumers growing interest in natural and healthy products have forced researches and industry to develop novel products with functional ingredients. Microalgae have been recognized as source of functional ingredients with positive health effects since these microorganisms produce polyunsaturated fatty acids, polysaccharides, natural pigments, essential minerals, vitamins, enzymes and bioactive peptides. For this reason, the manuscript reviews two of the main high-value metabolites which can be obtained from microalgae: pigments and essential lipids. Therefore, the extraction and purification methods for polyunsaturated fatty acids, astaxanthin, phycoerythrin and phycocyanin are described. Also, the effect that environmental growth conditions have in the production of these metabolites is described. This review summarizes the existing methods to extract and purify such metabolites in order to develop a feasible and sustainable algae industry.

Research paper thumbnail of Medina A., Schmidt-Heydt M., Rodríguez A., Parra R., Geisen R and Magan N (2014) Environmental stress impacts on growth, secondary metabolite biosynthetic gene clusters and metabolite production. Current Genetics

salt (0.87 a w = 22 % NaCl) niche such as cured meats, and produces ochratoxin A (OTA). There is ... more salt (0.87 a w = 22 % NaCl) niche such as cured meats, and produces ochratoxin A (OTA). There is differential and temporal expression of the genes in the secondary metabolite clusters in response to a w × temperature stress. We have used a microarray and integrated data on growth, relative expression of key genes in the biosynthetic pathways for secondary metabolite production and toxin production using a mixed growth model. This was used to correlate these factors and predict the toxin levels produced under different abiotic stress conditions. This system approach to integrate these different data sets and model the relationships could be a powerful tool for predicting the relative toxin production under extreme stress conditions, including climate change scenarios. This approach will facilitate a better functional understanding of the influence that environmental stress has on these mycotoxigenic fungi and enable better prevention strategies to be developed based on this system-based approach.

Research paper thumbnail of Renewable energy research progress in Mexico: A review

Renewable and Sustainable Energy Reviews, Apr 1, 2014

Mexico ranks 9th in the world in crude oil reserves, 4th in natural gas reserves in America and i... more Mexico ranks 9th in the world in crude oil reserves, 4th in natural gas reserves in America and it is also highly rich in renewable energy sources (solar, wind, biomasss, hydropower and geothermal). However, the potential of this type of energy has not been fully exploited. Hydropower is the renewable energy source with the highest installed capacity within the country (11,603 MW), while geothermal power capacity (958 MW) makes Mexico to be ranked 4th in the use of this energy worldwide. Wind energy potential is concentrated in five different zones, mainly in the state of Oaxaca, and solar energy has a high potential due to Mexico's ideal location in the so called Solar Belt. Biomass energy has the highest potential (2635 to 3771 PJ/year) and has been the subject of the highest number of research publications in the country during the last 30 years (1982–2012). Universidad Nacional Autonoma de Mexico has led research publications in hydropower, wind, solar and biomass energy and Instituto de Investigaciones Electricas in geothermal energy during this period. According to the General Law for Climate Change the country has set the goal of generating 35% of its energy needs from renewable sources by 2024. This paper presents an overview of the renewable energy options available in Mexico, current status, main positive results to date and future potential. It also analyses barriers hindering improvements and proposes pertinent solutions.