User Programs - DOE Joint Genome Institute (original) (raw)

DOE Joint Genome Institute

COVID-19
About Us
Contact Us
Our Science
- DOE Mission Areas
- Science Programs
- Science Highlights
- Scientists
  An Inside Look at How Plants and Mycorrhizal Fungi Cooperate
  Researchers looked at plant-fungi interactions in one of the first cross-kingdom spatially-resolved transcriptomics studies to date.
  More
  Eelgrass proves to be much younger than we thought
  Scientists have shed light on both when and how eelgrass adapted and evolved throughout its history. Knowing more about how eelgrass evolved can help inform conservation efforts for at-risk populations.
  More
  New Research Finds Flagella in the Terrestrial Roots of Marine Bacteria
  Scientists have discovered flagella in an unexpected place: hot spring-dwelling bacteria. Research shows that flagella were lost in other forms of Chloroflexota that adapted to marine environments hundreds of millions of years ago
  More
Our Projects
- Search JGI Projects
- DOE Metrics/Statistics
- Approved User Proposals
- Legacy Projects
  Getting to the Bottom of Fungal Functions Across Earth’s Forests
  Across four forests, researchers have leveraged data from the 1000 Fungal Genomes project to form new connections between fungal guilds, genes and function.
  More
  Genome Insider: Methane Makers in Yosemite’s Lakes
  Meet researchers who sampled the microbial communities living in the mountaintop lakes of the Sierra Nevada mountains to see how climate change affects freshwater ecosystems, and how those ecosystems work.
  Listen
  Genome Insider: A Shrubbier Version of Rubber
  Hear from the consortium working on understanding the guayule plant's genome, which could lead to an improved natural rubber plant.
  Listen
Data & Tools
- IMG
- Data Portal
- MycoCosm
- PhycoCosm
- Phytozome
- GOLD
  The Megadata of Lake Mendota
  How software and supercomputing capabilities have evolved to enable large-scale analysis: The story of a massive metagenome assembly for a time-series experiment from the highly-studied Lake Mendota.
  More
  LISTEN: Natural Prodcast on the SMC
  Check out the JGI Secondary Metabolism Collaboratory (SMC), a new data portal for natural product biosynthetic gene clusters and meet Prodcast cohost Jackie Winter.
  More
  Streamlining Regulon Identification in Bacteria
  Regulons are a group of genes that can be turned on or off by the same regulatory protein. RIViT-seq technology could speed up associating transcription factors with their target genes.
  More
User Programs
- Calls for Proposals
- Special Initiatives & Programs
- Product Offerings
- User Support
- Policies
- Submit a Proposal
  FY25 Awardees for Community Science Program Annual Call
  Prooposals from 18 researchers were selected for the 2025 JGI Community Science Program Annual Large Scale Call. Eight of the researchers have never been involved in a JGI proposal. Three are previous collaborators, though have never served as a principal investigator.
  More
  Pinning Down a Piece of Photosynthesis
  By studying the structure and function of a cyanobacterial protein, researchers have new insights into how these ocean photosynthesizers cycle carbon in changing conditions.
  More
  Genome Insider: What Happens To a Rainforest When You Dial Up Drought?
  Rainforests store a big fraction of all the carbon on Earth. Through the FICUS program, researchers take a look at what happens to that storage when a rainforest hits a drought.
  Listen
News & Publications
- News
- Blog
- Podcasts
- Webinars
- Publications
- Newsletter
- Logos and Templates
- Photos
  Genome Insider: Gotta Catch 'Em Gall
  To find new ways of engineering plants, researchers study wasps that program oak trees to raise their young in structures called galls.
  Listen
  A Decade On: The JGI-UC Merced Genomics Internship Program
  What started with 2 interns in the summer of 2014 has grown to 75 student alumni. Mentors, students and others gathered to reflect on the benefits of this partnership.
  More
  Genome Insider: Experimenting with EcoFABs for Student Labs
  Fabricated ecosystems - EcoFABs - let researchers around the world compare their work consistently. And they also work well in the classroom.
  Listen