John Fleng Steffensen | University of Copenhagen (original) (raw)

Papers by John Fleng Steffensen

Research paper thumbnail of Citation: Advancing Research for the Management of Long-Lived Species: A Case Study on the Greenland Shark

Frontiers, 2019

Long-lived species share life history traits such as slow growth, late maturity, and low fecundit... more Long-lived species share life history traits such as slow growth, late maturity, and low fecundity, which lead to slow recovery rates and increase a population's vulnerability to disturbance. The Greenland shark (Somniosus microcephalus) has recently been recognized as the world's longest-lived vertebrate, but many questions regarding its biology, physiology, and ecology remain unanswered. Here we review how current and future research will fill knowledge gaps about the Greenland shark and provide an overall framework to guide research and management priorities for this species. Key advances include the potential for specialized aging techniques and demographic studies to shed light on the distribution and age-class structure of Greenland shark populations. Advances in population genetics and genomics will reveal key factors contributing to the Greenland shark's extreme longevity, range and population size, and susceptibility to environmental change. New tagging technologies and improvements in experimental and analytical design will allow detailed monitoring of movement behaviors and interactions among Greenland sharks and other marine species, while shedding light on habitat use and susceptibility to fisheries interactions. Interdisciplinary approaches, such as the combined use of stable isotope analysis and high-tech data-logging devices (i.e., accelerometers and acoustic hydrophones) have the potential to improve knowledge of feeding strategies, predatory capabilities, and the trophic role of Greenland sharks. Measures of physiology, including estimation of metabolic rate, as well as heart rate Frontiers in Marine Science | www.frontiersin.org 1

Research paper thumbnail of Greenland Shark (Somniosus microcephalus) Stomach Contents and Stable Isotope Values Reveal an Ontogenetic Dietary Shift

Frontiers, 2019

Current knowledge on the feeding ecology of the Greenland shark (Somniosus microcephalus), a pote... more Current knowledge on the feeding ecology of the Greenland shark (Somniosus
microcephalus), a potential top predator in arctic marine ecosystems, is based on small
sample sizes as well as narrow size ranges of sharks. Therefore, potential size-related
feeding patterns remain poorly documented. Using stomach content data (N = 88)
and stable isotope values of white muscle tissue (N = 40), this study evaluates the
diet of sharks ranging in size from 81 to 474 cm (total length). The importance of
prey categories (“Fish,” “Mammal,” “Squid,” “Crustacean,” and “Other”) was evaluated
based on the reconstructed prey biomass of the stomach contents. Stable isotope
values of d13C and d15N ranged between 􀀀14.4 to 􀀀19.9h and 11.8 to 17.2h,
respectively. The importance of each prey category was estimated by the Index of
Relative Importance (IRI). Our findings suggest that the smallest Greenland sharks
(<200 cm) feed on lower trophic level prey, predominantly squids. Larger sharks
(>200 cm) mainly feed on higher trophic level prey such as seals, epibenthic and benthic
fishes including gadoids (Gadidae), skates (Rajidae), righteye flounders (Pleuronectidae),
lumpfish (Cyclopteridae), wolffish (Anarhichadidae), and redfish (Sebastidae). Redfish
were, however, only found to be important in the largest sharks sampled (>400 cm).
In addition to demonstrating ontogenetic shifts in their feeding preferences, this study
supports that Greenland sharks are capable of active predation on fast swimming seals
and large fishes.

Research paper thumbnail of Adapt, move or die - how will tropical coral reef fishes cope with ocean warming?

Global Change Biology, 2016

Previous studies hailed thermal tolerance and the capacity for organisms to acclimate and adapt a... more Previous studies hailed thermal tolerance and the capacity for organisms to acclimate and adapt as the primary pathways for species survival under climate change. Here we challenge this theory. Over the past decade, more than 365 tropical stenothermal fish species have been documented moving poleward, away from ocean warming hotspots where temperatures 2-3 °C above long-term annual means can compromise critical physiological processes. We examined the capacity of a model species - a thermally sensitive coral reef fish, Chromis viridis (Pomacentridae) - to use preference behaviour to regulate its body temperature. Movement could potentially circumvent the physiological stress response associated with elevated temperatures and may be a strategy relied upon before genetic adaptation can be effectuated. Individuals were maintained at one of six temperatures (23, 25, 27, 29, 31 and 33 °C) for at least 6 weeks. We compared the relative importance of acclimation temperature to changes in upper critical thermal limits, aerobic metabolic scope and thermal preference. While acclimation temperature positively affected the upper critical thermal limit, neither aerobic metabolic scope nor thermal preference exhibited such plasticity. Importantly, when given the choice to stay in a habitat reflecting their acclimation temperatures or relocate, fish acclimated to end-of-century predicted temperatures (i.e. 31 or 33 °C) preferentially sought out cooler temperatures, those equivalent to long-term summer averages in their natural habitats (~29 °C). This was also the temperature providing the greatest aerobic metabolic scope and body condition across all treatments. Consequently, acclimation can confer plasticity in some performance traits, but may be an unreliable indicator of the ultimate survival and distribution of mobile stenothermal species under global warming. Conversely, thermal preference can arise long before, and remain long after, the harmful effects of elevated ocean temperatures take hold and may be the primary driver of the escalating poleward migration of species.

Research paper thumbnail of Energetic and Kinematic benefits of schooling in Labriform fishes

Marine Ecology Progress Series

Research paper thumbnail of Winter temperatures decrease swimming performance and limit distributions of tropical damselfishes

Conservation Physiology, 2015

Coral reefs within 10° of the equator generally experience ≤3°C seasonal variation in water tempe... more Coral reefs within 10° of the equator generally experience ≤3°C seasonal variation in water temperature. Ectotherms that have evolved in these conditions are therefore expected to exhibit narrow thermal optima and be very sensitive to the greater thermal variability (&amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;gt;6°C) experienced at higher latitudes (≥10°N/S). The impact of increased thermal variability on the fitness and distribution of thermally sensitive reef ectotherms is currently unknown. Here, we examine site-attached planktivorous coral reef damselfishes that rely on their physiological capacity to swim and forage in the water column year round. We focus on 10 species spanning four evolutionarily distinct genera from a region of the Great Barrier Reef that experiences ≥6°C difference between seasons. Four ecologically important indicators showed reduced performance during the winter low (23°C) compared with the summer peak (29°C), with effect sizes varying among species and genera, as follows: (i) the energy available for activity (aerobic scope) was reduced by 35-45% in five species and three genera; (ii) the energetically most efficient swimming speed was reduced by 17% across all species; and (iii) the maximal critical swimming speed and (iv) the gait transition speed (the swimming mode predominantly used for foraging) were reduced by 16-42% in six species spanning all four genera. Comparisons with field surveys within and across latitudes showed that species-specific distributions were strongly correlated with these performance indicators. Species occupy habitats where they can swim faster than prevailing habitat currents year round, and &amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;gt;95% of individuals were observed only in habitats where the gait transition speed can be maintained at or above habitat currents. Thermal fluctuation at higher latitudes appears to reduce performance as well as the possible distribution of species and genera within and among coral reef habitats. Ultimately, thermal variability across latitudes may progressively cause sublethal changes to species performance and lead to a contraction of biogeographical range.

Research paper thumbnail of Behavioural thermoregulation in a temperature-sensitive coral reef fish, the five-lined cardinalfish (Cheilodipterus quinquelineatus)

Coral Reefs, 2015

As global temperatures increase, fish populations at low latitudes are thought to be at risk as t... more As global temperatures increase, fish populations at low latitudes are thought to be at risk as they are adapted to narrow temperature ranges and live at temperatures close to their thermal tolerance limits. Behavioural movements, based on a preference for a specific temperature (T pref), may provide a strategy to cope with changing conditions. A temperature-sensitive coral reef cardinalfish (Cheilodipterus quinquelineatus) was exposed to 28 °C (average at collection site) or 32 °C (predicted end-of-century) for 6 weeks. T pref was determined using a shut-tlebox system, which allowed fish to behaviourally manipulate their thermal environment. Regardless of treatment temperature, fish preferred 29.5 ± 0.25 °C, approximating summer average temperatures in the wild. However, 32 °C fish moved more frequently to correct their thermal environment than 28 °C fish, and daytime movements were more frequent than night-time movements. Understanding temperature-mediated movements is imperative for predicting how ocean warming will influence coral reef species and distribution patterns.

Research paper thumbnail of AquaResp3 Manual

PS: This manual is for the old version of AquaResp3 that some of you may have downloaded earlier ... more PS: This manual is for the old version of AquaResp3 that some of you may have downloaded earlier
The new version of AquaResp 3 that you can download from AquaResp.com come with a downloadable manual.
So don't download thsi for the new version!
Sorry for the inconvenience!
John
__________________________________________________________________________
Manual for free open-source respirometry software for measuring metabolic rate og aquatic animals - AquaResp3.
The software will be released soon.

Research paper thumbnail of Winter temperatures decrease swimming performance and limit distributions of tropical damselfishes

Coral reefs within 10° of the equator generally experience ≤3°C seasonal variation in water tempe... more Coral reefs within 10° of the equator generally experience ≤3°C seasonal variation in water temperature. Ectotherms that have evolved in these conditions are therefore expected to exhibit narrow thermal optima and be very sensitive to the greater thermal variability (>6°C) experienced at higher latitudes (≥10°N/S). The impact of increased thermal variability on the fitness and distribution of thermally sensitive reef ectotherms is currently unknown. Here, we examine site-attached planktivorous coral reef damselfishes that rely on their physiological capacity to swim and forage in the water column year round. We focus on 10 species spanning four evolutionarily distinct genera from a region of the Great Barrier Reef that experiences ≥6°C difference between seasons. Four ecologically important indicators showed reduced performance during the winter low (23°C) compared with the summer peak (29°C), with effect sizes varying among species and genera, as follows: (i) the energy available for activity (aerobic scope) was reduced by 35–45% in five species and three genera; (ii) the energetically most efficient swimming speed was reduced by 17% across all species; and (iii) the maximal critical swimming speed and (iv) the gait transition speed (the swimming mode predominantly used for foraging) were reduced by 16–42% in six species spanning all four genera. Comparisons with field surveys within and across latitudes showed that species-specific distributions were strongly correlated with these performance indicators. Species occupy habitats where they can swim faster than prevailing habitat currents year round, and >95% of individuals were observed only in habitats where the gait transition speed can be maintained at or above habitat currents. Thermal fluctuation at higher latitudes appears to reduce performance as well as the possible distribution of species and genera within and among coral reef habitats. Ultimately, thermal variability across latitudes may progressively cause sublethal changes to species performance and lead to a contraction of biogeographical range. Cite as: Johansen JL, Steffensen JF, Jones GP (2015) Winter temperatures decrease swimming performance and limit distributions of tropical damselfishes. Conserv Physiol 3: doi:10.1093/conphys/cov039.

Research paper thumbnail of Behavioural thermoregulation in a temperature-sensitive coral reef fish, the five-lined cardinalfish (Cheilodipterus quinquelineatus

As global temperatures increase, fish populations at low latitudes are thought to be at risk as t... more As global temperatures increase, fish populations at low latitudes are thought to be at risk as they are adapted to narrow temperature ranges and live at temperatures close to their thermal tolerance limits. Behavioural movements, based on a preference for a specific temperature (T pref), may provide a strategy to cope with changing conditions. A temperature-sensitive coral reef cardinalfish (Cheilodipterus quinquelineatus) was exposed to 28 °C (average at collection site) or 32 °C (predicted end-of-century) for 6 weeks. T pref was determined using a shut-tlebox system, which allowed fish to behaviourally manipulate their thermal environment. Regardless of treatment temperature, fish preferred 29.5 ± 0.25 °C, approximating summer average temperatures in the wild. However, 32 °C fish moved more frequently to correct their thermal environment than 28 °C fish, and daytime movements were more frequent than night-time movements. Understanding temperature-mediated movements is imperative for predicting how ocean warming will influence coral reef species and distribution patterns.

Research paper thumbnail of Partitioning the metabolic scope: the importance of anaerobic metabolism and implications for the oxygen-and capacity-limited thermal tolerance (OCLTT) hypothesis

Ongoing climate change is predicted to affect the distribution and abundance of aquatic ectotherm... more Ongoing climate change is predicted to affect the distribution and abundance of aquatic ectotherms owing to increasing constraints on organismal physiology, in particular involving the metabolic scope (MS) available for performance and fitness. The oxygen-and capacity-limited thermal tolerance (OCLTT) hypothesis prescribes MS as an overarching benchmark for fitness related performance and assumes that any anaerobic contribution within the MS is insignificant. The MS is typically derived from respirometry by subtracting standard metabolic rate from the maximal metabolic rate; however, the methodology rarely accounts for anaerobic metabolism within the MS. Using gilthead sea bream (Sparus aurata) and Trinidadian guppy (Poecilia reticulata), this study tested for trade-offs (i) between aerobic and anaerobic components of locomotor performance; and (ii) between the corresponding components of the MS. Data collection involved measuring oxygen consumption rate at increasing swimming speeds, using the gait transition from steady to unsteady (burst-assisted) swimming to detect the onset of anaerobic metabolism. Results provided evidence of the locomotor performance trade-off, but only in S. aurata. In contrast, both species revealed significant negative correlations between aerobic and anaerobic components of the MS, indicating a trade-off where both components of the MS cannot be optimized simultaneously. Importantly, the fraction of the MS influenced by anaerobic metabolism was on average 24.3 and 26.1% in S. aurata and P. reticulata, respectively. These data highlight the importance of taking anaerobic metabolism into account when assessing effects of environmental variation on the MS, because the fraction where anaerobic metabolism occurs is a poor indicator of sustainable aerobic performance. Our results suggest that without accounting for anaerobic metabolism within the MS, studies involving the OCLTT hypothesis could overestimate the metabolic scope available for sustainable activities and the ability of individuals and species to cope with climate change.

Research paper thumbnail of Laser Speckle Contrast Imaging for Monitoring Changes in Microvascular Blood Flow

Background/Aims: Microvascular blood flow is essential for healing and predicts surgical outcome.... more Background/Aims: Microvascular blood flow is essential for healing and predicts surgical outcome. The aim of the current study was to investigate the relation between fluxes measured with the laser speckle contrast imaging (LSCI) technique and changes in absolute blood flow. In addition, we studied the reproducibility of the LSCI technique when assessing the intra-abdominal microcirculation of the pig. Methods: During trial 1, a fish gill arch was mechanically perfused with heparinized fish blood under controlled stepwise-altered flow rates alongside mechanically induced movement artefacts. The microcirculation of the fish gill was simultaneously assessed with the LSCI technique. In trial 2, microcirculation was measured in the stomach, liver, and small intestine of 10 pigs by two observers. Results: A linear correlation was observed between flux and volumetric flow. During conditions of no volumetric flow, the high recording speed with the LSCI technique registered the movement artefacts as flow signals. The LSCI measurements showed good correlation and agreement between the two observers when assessing microcirculation in the stomach, liver, and small intestine (r 2 = 0.857, 0.956, and 0.946; coefficients of variation = 6.0, 3.2, and 6.4%, respectively). Conclusion: Due to the non-contact and real-time assessment over large areas, LSCI is a promising technique for the intraoperative assessment of intra-abdominal microcirculation. A linear correlation between flux and volumetric flow was found, in accordance with previous experimental studies. However, movement artefacts affect flux measurements, and the choice of the sampling speed must be made with care, depending on the given setting.

Research paper thumbnail of Design and setup of intermittent-flow respirometry system for aquatic organisms

Research paper thumbnail of The determination of standard metabolic rate in fishes

Research paper thumbnail of Effect of closed v. intermittent-flow respirometry on hypoxia tolerance in the shiner perch Cymatogaster aggregata

This study compares the critical oxygen saturation (O 2crit) levels of the shiner perch Cymatogas... more This study compares the critical oxygen saturation (O 2crit) levels of the shiner perch Cymatogaster aggregata obtained using two different methods wherein hypoxia is induced either by the fish's respiration (closed respirometry) or by degassing oxygen with nitrogen (intermittent-flow respirometry). Fish exhibited loss of equilibrium at a higher O 2 saturation in the closed respirometry method when compared with the intermittent-flow method. Utilization of closed respirometry yielded O 2crit measurements that were almost twice as high as those obtained with intermittent-flow respirometry. The lower hypoxia tolerance in closed respirometry is consistent with additional stress, caused by a build-up of ammonia and carbon dioxide and a faster rate in dissolved oxygen decline. The results indicate that these two methods of determining hypoxia tolerance in aquatic organisms are not comparable, and that much care should be given to method choice.

Research paper thumbnail of Sources of variation in oxygen consumption of aquatic animals demonstrated by simulated constant oxygen consumption and respirometers of different sizes

As intermittent-flow respirometry has become a common method for the determination of resting met... more As intermittent-flow respirometry has become a common method for the determination of resting metabolism or standard metabolic rate (SMR), this study investigated how much of the variability seen in the experiments was due to measurement error. Experiments simulated different constant oxygen consumption rates (̇ MO 2) of a fish, by continuously injecting anoxic water into a respirometer, altering the injection rate to correct for the washout error. The effect of respirometer-to-fish volume ratio (RFR) on SMR measurement and variability was also investigated, using the simulated constant ̇ MO 2 and the ̇ MO 2 of seven roach Rutilus rutilus in respirometers of two different sizes. The results show that higher RFR increases measurement variability but does not change the mean SMR established using a double Gaussian fit. Further, the study demonstrates that the variation observed when determining oxygen consumption rates of fishes in systems with reasonable RFRs mainly comes from the animal, not from the measuring equipment.

Research paper thumbnail of Effect of closed v. intermittent-flow respirometry on hypoxia tolerance in the shiner perch Cymatogaster aggregata

This study compares the critical oxygen saturation (O 2crit) levels of the shiner perch Cymatogas... more This study compares the critical oxygen saturation (O 2crit) levels of the shiner perch Cymatogaster aggregata obtained using two different methods wherein hypoxia is induced either by the fish's respiration (closed respirometry) or by degassing oxygen with nitrogen (intermittent-flow respirometry). Fish exhibited loss of equilibrium at a higher O 2 saturation in the closed respirometry method when compared with the intermittent-flow method. Utilization of closed respirometry yielded O 2crit measurements that were almost twice as high as those obtained with intermittent-flow respirometry. The lower hypoxia tolerance in closed respirometry is consistent with additional stress, caused by a build-up of ammonia and carbon dioxide and a faster rate in dissolved oxygen decline. The results indicate that these two methods of determining hypoxia tolerance in aquatic organisms are not comparable, and that much care should be given to method choice.

Research paper thumbnail of Energetics of median and paired fin swimming, body and caudal fin swimming, and gait transition in parrotfish (Scarus schlegeli) and triggerfish (Rhinecanthus aculeatus)

The Journal of Experimental Biology, May 1, 2002

Research paper thumbnail of Oxyguard D15 Micro brochure gb

Research paper thumbnail of Macromolecular capillary permeability of three species of fish

Research paper thumbnail of The cost of hovering and forward flight in a nectar-feeding bat, Glossophaga soricina, estimated by aerodynamic theory

Journal of Experimental Biology, Apr 20, 1993

Research paper thumbnail of Citation: Advancing Research for the Management of Long-Lived Species: A Case Study on the Greenland Shark

Frontiers, 2019

Long-lived species share life history traits such as slow growth, late maturity, and low fecundit... more Long-lived species share life history traits such as slow growth, late maturity, and low fecundity, which lead to slow recovery rates and increase a population's vulnerability to disturbance. The Greenland shark (Somniosus microcephalus) has recently been recognized as the world's longest-lived vertebrate, but many questions regarding its biology, physiology, and ecology remain unanswered. Here we review how current and future research will fill knowledge gaps about the Greenland shark and provide an overall framework to guide research and management priorities for this species. Key advances include the potential for specialized aging techniques and demographic studies to shed light on the distribution and age-class structure of Greenland shark populations. Advances in population genetics and genomics will reveal key factors contributing to the Greenland shark's extreme longevity, range and population size, and susceptibility to environmental change. New tagging technologies and improvements in experimental and analytical design will allow detailed monitoring of movement behaviors and interactions among Greenland sharks and other marine species, while shedding light on habitat use and susceptibility to fisheries interactions. Interdisciplinary approaches, such as the combined use of stable isotope analysis and high-tech data-logging devices (i.e., accelerometers and acoustic hydrophones) have the potential to improve knowledge of feeding strategies, predatory capabilities, and the trophic role of Greenland sharks. Measures of physiology, including estimation of metabolic rate, as well as heart rate Frontiers in Marine Science | www.frontiersin.org 1

Research paper thumbnail of Greenland Shark (Somniosus microcephalus) Stomach Contents and Stable Isotope Values Reveal an Ontogenetic Dietary Shift

Frontiers, 2019

Current knowledge on the feeding ecology of the Greenland shark (Somniosus microcephalus), a pote... more Current knowledge on the feeding ecology of the Greenland shark (Somniosus
microcephalus), a potential top predator in arctic marine ecosystems, is based on small
sample sizes as well as narrow size ranges of sharks. Therefore, potential size-related
feeding patterns remain poorly documented. Using stomach content data (N = 88)
and stable isotope values of white muscle tissue (N = 40), this study evaluates the
diet of sharks ranging in size from 81 to 474 cm (total length). The importance of
prey categories (“Fish,” “Mammal,” “Squid,” “Crustacean,” and “Other”) was evaluated
based on the reconstructed prey biomass of the stomach contents. Stable isotope
values of d13C and d15N ranged between 􀀀14.4 to 􀀀19.9h and 11.8 to 17.2h,
respectively. The importance of each prey category was estimated by the Index of
Relative Importance (IRI). Our findings suggest that the smallest Greenland sharks
(<200 cm) feed on lower trophic level prey, predominantly squids. Larger sharks
(>200 cm) mainly feed on higher trophic level prey such as seals, epibenthic and benthic
fishes including gadoids (Gadidae), skates (Rajidae), righteye flounders (Pleuronectidae),
lumpfish (Cyclopteridae), wolffish (Anarhichadidae), and redfish (Sebastidae). Redfish
were, however, only found to be important in the largest sharks sampled (>400 cm).
In addition to demonstrating ontogenetic shifts in their feeding preferences, this study
supports that Greenland sharks are capable of active predation on fast swimming seals
and large fishes.

Research paper thumbnail of Adapt, move or die - how will tropical coral reef fishes cope with ocean warming?

Global Change Biology, 2016

Previous studies hailed thermal tolerance and the capacity for organisms to acclimate and adapt a... more Previous studies hailed thermal tolerance and the capacity for organisms to acclimate and adapt as the primary pathways for species survival under climate change. Here we challenge this theory. Over the past decade, more than 365 tropical stenothermal fish species have been documented moving poleward, away from ocean warming hotspots where temperatures 2-3 °C above long-term annual means can compromise critical physiological processes. We examined the capacity of a model species - a thermally sensitive coral reef fish, Chromis viridis (Pomacentridae) - to use preference behaviour to regulate its body temperature. Movement could potentially circumvent the physiological stress response associated with elevated temperatures and may be a strategy relied upon before genetic adaptation can be effectuated. Individuals were maintained at one of six temperatures (23, 25, 27, 29, 31 and 33 °C) for at least 6 weeks. We compared the relative importance of acclimation temperature to changes in upper critical thermal limits, aerobic metabolic scope and thermal preference. While acclimation temperature positively affected the upper critical thermal limit, neither aerobic metabolic scope nor thermal preference exhibited such plasticity. Importantly, when given the choice to stay in a habitat reflecting their acclimation temperatures or relocate, fish acclimated to end-of-century predicted temperatures (i.e. 31 or 33 °C) preferentially sought out cooler temperatures, those equivalent to long-term summer averages in their natural habitats (~29 °C). This was also the temperature providing the greatest aerobic metabolic scope and body condition across all treatments. Consequently, acclimation can confer plasticity in some performance traits, but may be an unreliable indicator of the ultimate survival and distribution of mobile stenothermal species under global warming. Conversely, thermal preference can arise long before, and remain long after, the harmful effects of elevated ocean temperatures take hold and may be the primary driver of the escalating poleward migration of species.

Research paper thumbnail of Energetic and Kinematic benefits of schooling in Labriform fishes

Marine Ecology Progress Series

Research paper thumbnail of Winter temperatures decrease swimming performance and limit distributions of tropical damselfishes

Conservation Physiology, 2015

Coral reefs within 10° of the equator generally experience ≤3°C seasonal variation in water tempe... more Coral reefs within 10° of the equator generally experience ≤3°C seasonal variation in water temperature. Ectotherms that have evolved in these conditions are therefore expected to exhibit narrow thermal optima and be very sensitive to the greater thermal variability (&amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;gt;6°C) experienced at higher latitudes (≥10°N/S). The impact of increased thermal variability on the fitness and distribution of thermally sensitive reef ectotherms is currently unknown. Here, we examine site-attached planktivorous coral reef damselfishes that rely on their physiological capacity to swim and forage in the water column year round. We focus on 10 species spanning four evolutionarily distinct genera from a region of the Great Barrier Reef that experiences ≥6°C difference between seasons. Four ecologically important indicators showed reduced performance during the winter low (23°C) compared with the summer peak (29°C), with effect sizes varying among species and genera, as follows: (i) the energy available for activity (aerobic scope) was reduced by 35-45% in five species and three genera; (ii) the energetically most efficient swimming speed was reduced by 17% across all species; and (iii) the maximal critical swimming speed and (iv) the gait transition speed (the swimming mode predominantly used for foraging) were reduced by 16-42% in six species spanning all four genera. Comparisons with field surveys within and across latitudes showed that species-specific distributions were strongly correlated with these performance indicators. Species occupy habitats where they can swim faster than prevailing habitat currents year round, and &amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;amp;gt;95% of individuals were observed only in habitats where the gait transition speed can be maintained at or above habitat currents. Thermal fluctuation at higher latitudes appears to reduce performance as well as the possible distribution of species and genera within and among coral reef habitats. Ultimately, thermal variability across latitudes may progressively cause sublethal changes to species performance and lead to a contraction of biogeographical range.

Research paper thumbnail of Behavioural thermoregulation in a temperature-sensitive coral reef fish, the five-lined cardinalfish (Cheilodipterus quinquelineatus)

Coral Reefs, 2015

As global temperatures increase, fish populations at low latitudes are thought to be at risk as t... more As global temperatures increase, fish populations at low latitudes are thought to be at risk as they are adapted to narrow temperature ranges and live at temperatures close to their thermal tolerance limits. Behavioural movements, based on a preference for a specific temperature (T pref), may provide a strategy to cope with changing conditions. A temperature-sensitive coral reef cardinalfish (Cheilodipterus quinquelineatus) was exposed to 28 °C (average at collection site) or 32 °C (predicted end-of-century) for 6 weeks. T pref was determined using a shut-tlebox system, which allowed fish to behaviourally manipulate their thermal environment. Regardless of treatment temperature, fish preferred 29.5 ± 0.25 °C, approximating summer average temperatures in the wild. However, 32 °C fish moved more frequently to correct their thermal environment than 28 °C fish, and daytime movements were more frequent than night-time movements. Understanding temperature-mediated movements is imperative for predicting how ocean warming will influence coral reef species and distribution patterns.

Research paper thumbnail of AquaResp3 Manual

PS: This manual is for the old version of AquaResp3 that some of you may have downloaded earlier ... more PS: This manual is for the old version of AquaResp3 that some of you may have downloaded earlier
The new version of AquaResp 3 that you can download from AquaResp.com come with a downloadable manual.
So don't download thsi for the new version!
Sorry for the inconvenience!
John
__________________________________________________________________________
Manual for free open-source respirometry software for measuring metabolic rate og aquatic animals - AquaResp3.
The software will be released soon.

Research paper thumbnail of Winter temperatures decrease swimming performance and limit distributions of tropical damselfishes

Coral reefs within 10° of the equator generally experience ≤3°C seasonal variation in water tempe... more Coral reefs within 10° of the equator generally experience ≤3°C seasonal variation in water temperature. Ectotherms that have evolved in these conditions are therefore expected to exhibit narrow thermal optima and be very sensitive to the greater thermal variability (>6°C) experienced at higher latitudes (≥10°N/S). The impact of increased thermal variability on the fitness and distribution of thermally sensitive reef ectotherms is currently unknown. Here, we examine site-attached planktivorous coral reef damselfishes that rely on their physiological capacity to swim and forage in the water column year round. We focus on 10 species spanning four evolutionarily distinct genera from a region of the Great Barrier Reef that experiences ≥6°C difference between seasons. Four ecologically important indicators showed reduced performance during the winter low (23°C) compared with the summer peak (29°C), with effect sizes varying among species and genera, as follows: (i) the energy available for activity (aerobic scope) was reduced by 35–45% in five species and three genera; (ii) the energetically most efficient swimming speed was reduced by 17% across all species; and (iii) the maximal critical swimming speed and (iv) the gait transition speed (the swimming mode predominantly used for foraging) were reduced by 16–42% in six species spanning all four genera. Comparisons with field surveys within and across latitudes showed that species-specific distributions were strongly correlated with these performance indicators. Species occupy habitats where they can swim faster than prevailing habitat currents year round, and >95% of individuals were observed only in habitats where the gait transition speed can be maintained at or above habitat currents. Thermal fluctuation at higher latitudes appears to reduce performance as well as the possible distribution of species and genera within and among coral reef habitats. Ultimately, thermal variability across latitudes may progressively cause sublethal changes to species performance and lead to a contraction of biogeographical range. Cite as: Johansen JL, Steffensen JF, Jones GP (2015) Winter temperatures decrease swimming performance and limit distributions of tropical damselfishes. Conserv Physiol 3: doi:10.1093/conphys/cov039.

Research paper thumbnail of Behavioural thermoregulation in a temperature-sensitive coral reef fish, the five-lined cardinalfish (Cheilodipterus quinquelineatus

As global temperatures increase, fish populations at low latitudes are thought to be at risk as t... more As global temperatures increase, fish populations at low latitudes are thought to be at risk as they are adapted to narrow temperature ranges and live at temperatures close to their thermal tolerance limits. Behavioural movements, based on a preference for a specific temperature (T pref), may provide a strategy to cope with changing conditions. A temperature-sensitive coral reef cardinalfish (Cheilodipterus quinquelineatus) was exposed to 28 °C (average at collection site) or 32 °C (predicted end-of-century) for 6 weeks. T pref was determined using a shut-tlebox system, which allowed fish to behaviourally manipulate their thermal environment. Regardless of treatment temperature, fish preferred 29.5 ± 0.25 °C, approximating summer average temperatures in the wild. However, 32 °C fish moved more frequently to correct their thermal environment than 28 °C fish, and daytime movements were more frequent than night-time movements. Understanding temperature-mediated movements is imperative for predicting how ocean warming will influence coral reef species and distribution patterns.

Research paper thumbnail of Partitioning the metabolic scope: the importance of anaerobic metabolism and implications for the oxygen-and capacity-limited thermal tolerance (OCLTT) hypothesis

Ongoing climate change is predicted to affect the distribution and abundance of aquatic ectotherm... more Ongoing climate change is predicted to affect the distribution and abundance of aquatic ectotherms owing to increasing constraints on organismal physiology, in particular involving the metabolic scope (MS) available for performance and fitness. The oxygen-and capacity-limited thermal tolerance (OCLTT) hypothesis prescribes MS as an overarching benchmark for fitness related performance and assumes that any anaerobic contribution within the MS is insignificant. The MS is typically derived from respirometry by subtracting standard metabolic rate from the maximal metabolic rate; however, the methodology rarely accounts for anaerobic metabolism within the MS. Using gilthead sea bream (Sparus aurata) and Trinidadian guppy (Poecilia reticulata), this study tested for trade-offs (i) between aerobic and anaerobic components of locomotor performance; and (ii) between the corresponding components of the MS. Data collection involved measuring oxygen consumption rate at increasing swimming speeds, using the gait transition from steady to unsteady (burst-assisted) swimming to detect the onset of anaerobic metabolism. Results provided evidence of the locomotor performance trade-off, but only in S. aurata. In contrast, both species revealed significant negative correlations between aerobic and anaerobic components of the MS, indicating a trade-off where both components of the MS cannot be optimized simultaneously. Importantly, the fraction of the MS influenced by anaerobic metabolism was on average 24.3 and 26.1% in S. aurata and P. reticulata, respectively. These data highlight the importance of taking anaerobic metabolism into account when assessing effects of environmental variation on the MS, because the fraction where anaerobic metabolism occurs is a poor indicator of sustainable aerobic performance. Our results suggest that without accounting for anaerobic metabolism within the MS, studies involving the OCLTT hypothesis could overestimate the metabolic scope available for sustainable activities and the ability of individuals and species to cope with climate change.

Research paper thumbnail of Laser Speckle Contrast Imaging for Monitoring Changes in Microvascular Blood Flow

Background/Aims: Microvascular blood flow is essential for healing and predicts surgical outcome.... more Background/Aims: Microvascular blood flow is essential for healing and predicts surgical outcome. The aim of the current study was to investigate the relation between fluxes measured with the laser speckle contrast imaging (LSCI) technique and changes in absolute blood flow. In addition, we studied the reproducibility of the LSCI technique when assessing the intra-abdominal microcirculation of the pig. Methods: During trial 1, a fish gill arch was mechanically perfused with heparinized fish blood under controlled stepwise-altered flow rates alongside mechanically induced movement artefacts. The microcirculation of the fish gill was simultaneously assessed with the LSCI technique. In trial 2, microcirculation was measured in the stomach, liver, and small intestine of 10 pigs by two observers. Results: A linear correlation was observed between flux and volumetric flow. During conditions of no volumetric flow, the high recording speed with the LSCI technique registered the movement artefacts as flow signals. The LSCI measurements showed good correlation and agreement between the two observers when assessing microcirculation in the stomach, liver, and small intestine (r 2 = 0.857, 0.956, and 0.946; coefficients of variation = 6.0, 3.2, and 6.4%, respectively). Conclusion: Due to the non-contact and real-time assessment over large areas, LSCI is a promising technique for the intraoperative assessment of intra-abdominal microcirculation. A linear correlation between flux and volumetric flow was found, in accordance with previous experimental studies. However, movement artefacts affect flux measurements, and the choice of the sampling speed must be made with care, depending on the given setting.

Research paper thumbnail of Design and setup of intermittent-flow respirometry system for aquatic organisms

Research paper thumbnail of The determination of standard metabolic rate in fishes

Research paper thumbnail of Effect of closed v. intermittent-flow respirometry on hypoxia tolerance in the shiner perch Cymatogaster aggregata

This study compares the critical oxygen saturation (O 2crit) levels of the shiner perch Cymatogas... more This study compares the critical oxygen saturation (O 2crit) levels of the shiner perch Cymatogaster aggregata obtained using two different methods wherein hypoxia is induced either by the fish's respiration (closed respirometry) or by degassing oxygen with nitrogen (intermittent-flow respirometry). Fish exhibited loss of equilibrium at a higher O 2 saturation in the closed respirometry method when compared with the intermittent-flow method. Utilization of closed respirometry yielded O 2crit measurements that were almost twice as high as those obtained with intermittent-flow respirometry. The lower hypoxia tolerance in closed respirometry is consistent with additional stress, caused by a build-up of ammonia and carbon dioxide and a faster rate in dissolved oxygen decline. The results indicate that these two methods of determining hypoxia tolerance in aquatic organisms are not comparable, and that much care should be given to method choice.

Research paper thumbnail of Sources of variation in oxygen consumption of aquatic animals demonstrated by simulated constant oxygen consumption and respirometers of different sizes

As intermittent-flow respirometry has become a common method for the determination of resting met... more As intermittent-flow respirometry has become a common method for the determination of resting metabolism or standard metabolic rate (SMR), this study investigated how much of the variability seen in the experiments was due to measurement error. Experiments simulated different constant oxygen consumption rates (̇ MO 2) of a fish, by continuously injecting anoxic water into a respirometer, altering the injection rate to correct for the washout error. The effect of respirometer-to-fish volume ratio (RFR) on SMR measurement and variability was also investigated, using the simulated constant ̇ MO 2 and the ̇ MO 2 of seven roach Rutilus rutilus in respirometers of two different sizes. The results show that higher RFR increases measurement variability but does not change the mean SMR established using a double Gaussian fit. Further, the study demonstrates that the variation observed when determining oxygen consumption rates of fishes in systems with reasonable RFRs mainly comes from the animal, not from the measuring equipment.

Research paper thumbnail of Effect of closed v. intermittent-flow respirometry on hypoxia tolerance in the shiner perch Cymatogaster aggregata

This study compares the critical oxygen saturation (O 2crit) levels of the shiner perch Cymatogas... more This study compares the critical oxygen saturation (O 2crit) levels of the shiner perch Cymatogaster aggregata obtained using two different methods wherein hypoxia is induced either by the fish's respiration (closed respirometry) or by degassing oxygen with nitrogen (intermittent-flow respirometry). Fish exhibited loss of equilibrium at a higher O 2 saturation in the closed respirometry method when compared with the intermittent-flow method. Utilization of closed respirometry yielded O 2crit measurements that were almost twice as high as those obtained with intermittent-flow respirometry. The lower hypoxia tolerance in closed respirometry is consistent with additional stress, caused by a build-up of ammonia and carbon dioxide and a faster rate in dissolved oxygen decline. The results indicate that these two methods of determining hypoxia tolerance in aquatic organisms are not comparable, and that much care should be given to method choice.

Research paper thumbnail of Energetics of median and paired fin swimming, body and caudal fin swimming, and gait transition in parrotfish (Scarus schlegeli) and triggerfish (Rhinecanthus aculeatus)

The Journal of Experimental Biology, May 1, 2002

Research paper thumbnail of Oxyguard D15 Micro brochure gb

Research paper thumbnail of Macromolecular capillary permeability of three species of fish

Research paper thumbnail of The cost of hovering and forward flight in a nectar-feeding bat, Glossophaga soricina, estimated by aerodynamic theory

Journal of Experimental Biology, Apr 20, 1993