Molecular cloning and characterization of the dpy-20 gene of Caenorhabditis elegans (original) (raw)
- Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ (1990) Basic local alignment search tool. J Mol Biol 215:403–410
Google Scholar - Babity JM (1993) A low level Tc1 transposition and Tc1 induced mutations in dpy-5. Ph.D. Thesis, University of British Columbia, Vancouver, B.C., Canada
Google Scholar - Baillie DL, Beckenbach KA, Rose AM (1985) Cloning within the unc-43 to unc-31 interval (linkage group IV) of the Caenorhabditis elegans genome using Tc1 linkage selection. Can J Genet Cytol 27:457–466
Google Scholar - Bairoch A (1990) PROSITE: a dictionary of protein sites and patterns. University of Geneva, fifth release
- Barstead RJ, Waterston RH (1989) The basal component of the nematode dense body is vinculin. J Biol Chem 264:10177–10185
Google Scholar - Brenner S (1974) The genetics of Caenorhabditis elegans. Genetics 77:71–94
Google Scholar - Cabot EL, Beckenbach AT (1989) Simultaneous editing of multiple nucleic acid and protein sequences with ESEE. Comp Appl Biosci 5:233–234
Google Scholar - Chirgwin JM, Przybyla AE, MacDonald RJ, Rutter WJ (1979) Isolation of biologically active ribonucleic acid from sources enriched in ribonuclease. Biochemistry 18:5294–5299
Google Scholar - Clark DV, Baillie DL (1992) Genetic analysis and complementation by germ-line transformation of lethal mutations in the unc-22(IV) region of Caenorhabditis elegans. Mol Gen Genet 232:97–105
Google Scholar - Clark DV, Rogalski TM, Donati LM, Baillie DL (1988) The unc22(IV) region of Caenorhabditis elegans: genetic analysis of lethal mutations. Genetics 119:345–353
Google Scholar - Coulson A, Waterston R, Kiff J, Sulston J, Kohara Y (1988) Genome linking with yeast artificial chromosomes. Nature 335:184–186
Google Scholar - Cox GN, Hirsh D (1985) Stage-specific patterns of collagen gene expression during development of Caenorhabditis elegans. Mol Cell Biol 5:363–372
Google Scholar - Cox GN, Kusch M, DeNevi K, Edgar RS (1981a) Temporal regulation of cuticle synthesis during development of Caenorhabditis elegans. Dev Biol 84:277–285
Google Scholar - Cox GN, Kusch M, Edgar RS (1981b) Cuticle of Caenorhabditis elegans: its isolation and partial characterization. J Cell Biol 90:7–17
Google Scholar - Cox GN, Staprans S, Edgar RS (1981c) The cuticle of Caenorhabditis elegans II. Stage-specific changes in ultrastructure and protein composition during postembryonic development. Dev Biol 86:456–470
Google Scholar - Cox GN, Carr S, Kramer JM, Hirsh D (1985) Genetic mapping of Caenorhabditis elegans collagen genes using DNA polymorphisms as phenotypic markers. Genetics 109:513–528
Google Scholar - Davis RW, Botstein D, Roth JR (1980) A manual for genetic engineering: advanced bacterial genetics. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
Google Scholar - Emmons SW, Klass MR, Hirsh D (1979) Analysis of the constancy of DNA sequences during development and evolution of the nematode Caenorhabditis elegans. Proc Natl Acad Sci USA 76:1333–1337
Google Scholar - Feinberg A, Vogelstein B (1983) A technique for radiolabelling DNA restriction endonuclease fragments to high specific activity. Anal Biochem 132:6–13
Google Scholar - Fire A (1986) Integrative transformation of Caenorhabditis elegans. EMBO J 5:2673–2680
Google Scholar - Guo X, Kramer JM (1989) The two Caenorhabditis elegans basement membrane (type IV) collagen genes are located on separate chromosomes. J Biol Chem 264:17575–17582
Google Scholar - Heery DM, Gannon F, Powell R (1990) A simple method for subcloning DNA fragments from gel slices. Trends Genet 6:173
Google Scholar - Heine U, Blumenthal T (1986) Characterization of regions of the Caenorhabditis elegans X chromosome containing vitellogenin genes. J Mol Biol 188:301–312
Google Scholar - Henikoff S, Eghtedarzadeh K (1987) Conserved arrangement of nested genes at the Drosophila Gart locus. Genetics 117:711–725
Google Scholar - Heschl MFP, Baillie DL (1990) Functional elements and domains inferred from sequence comparisons of a heat shock gene in two nematodes. J Mol Evol 31:3–9
Google Scholar - Hodgkin J (1985) Novel nematode amber suppressors. Genetics 111:287–310
Google Scholar - Hodgkin J (1987) Sex determination and dosage compensation in Caenorhabditis elegans. Annu Rev Genet 21:133–154
Google Scholar - Horvitz HR, Brenner S, Hodgkin J, Herman RK (1979) A uniform genetic nomenclature for the nematode Caenorhabditis elegans. Mol Gen Genet 175:129–133
Google Scholar - Hosono R, Hirahara K, Kuno S, Kurihara T (1982) Mutants of Caenorhabditis elegans with dumpy and rounded head phenotype. J Exp Zool 224:135–144
Google Scholar - Isnenghi E, Cassada R, Smith K, Denich K, Radnia K, von Ehrenstein G (1983) Maternal effects and temperature-sensitive period of mutations affecting embryogenesis in Caenorhabditis elegans. Dev Biol 98:465–480
Google Scholar - Kondo K, Hodgkin J, Waterston RH (1988) Differential expression of five tRNAtrp(AUG) amber suppressors in Caenorhabditis elegans. Mol Cell Biol 8:3627–3635
Google Scholar - Kramer JM (1994) Structures and functions of collagens in Caenorhabditis elegans. FASEB J 8:329–336
Google Scholar - Lewis JA, Wu C-H, Berg H, Levine JH (1980) The genetics of levamisole resistance in the nematode Caenorhabditis elegans. Genetics 95:905–928
Google Scholar - Maniatis T, Fritsch EF, Sambrook J (1982) Molecular cloning: a laboratory manual. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York
Google Scholar - Meneely PM, Herman RK (1979) Suppression and function of X-linked lethal and sterile mutations in Caenorhabditis elegans. Genetics 97:65–84
Google Scholar - Meneely PM, Wood WB (1987) Genetic analysis of X-chromosome dosage compensation in Caenorhabditis elegans. Genetics 117:25–41
Google Scholar - Meyer BJ, Casson LP (1986) Caenorhabditis elegans compensates for the difference in X chromosome dosage between the sexes by regulation of transcript levels. Cell 47:871–881
Google Scholar - Moerman DG, Baillie DL (1979) Genetic organization in Caenorhabditis elegans: fine structure analysis of the unc-22 gene. Genetics 91:95–103
Google Scholar - Mori I, Moerman DG, Waterston RH (1988) Analysis of a mutator activity necessary for germline transposition and excision of Tc1 transposable elements in Caenorhabditis elegans. Genetics 120:397–407
Google Scholar - Ouazana R, Garrone R, Godet J (1985) Characterization of morphological and biochemical defects in the cuticle of a dumpy mutant of Caenorhabditis elegans. Comp Biochem Physiol B 80:481–484
Google Scholar - Pearson WR, Lipman DJ (1988) Improved tools for biological sequence analysis. Proc Natl Acad Sci USA 85:2444–2448
Google Scholar - Prasad SS, Baillie DL (1989) Evolutionarily conserved coding sequences in the dpy-20-unc-22 region of Caenorhabditis elegans. Genomics 5:185–198
Google Scholar - Priess JR, Hirsh D (1986) Caenorhabditis elegans morphogenesis: the role of the cytoskeleton in elongation of the embryo. Dev Biol 117:156–173
Google Scholar - Rigby PW, Dieckmann, Rhodes C, Berg P (1977) Labelling deoxyribonucleic acid to high specific activity in vitro by nick translation with DNA polymerase. J Mol Biol 113:237–251
Google Scholar - Rogalski TM, Baillie DL (1985) Genetic organization of the unc22 IV gene and the adjacent region in Caenorhabditis elegans. Mol Gen Genet 201:409–414
Google Scholar - Rogalski TM, Gilchrist EJ, Mullen GP, Moerman DG (1995) Mutations in the unc-52 gene responsible for body wall muscle defects in adult Caenorhabdits elegans are located in alternatively spliced exons. Genetics 139:159–169
Google Scholar - Rogalski TM, Moerman DM, Baillie DL (1982) Essential genes and deficiencies in the unc-22 IV region of Caenorhabitis elegans. Genetics 102:725–736
Google Scholar - Rogalski TM, Williams BD, Mullen GP, Moerman DG (1993) Products of the unc-52 gene in Caenorhabditis elegans are homologous to the core protein of the mammalian basement membrane heparan sulfate proteoglycan. Genes Dev 7:1471–1484
Google Scholar - Rychlik W, Rhoads RE (1989) A computer programme for choosing optimal oligonucleotides for filter hybridization, sequencing, and in vitro amplification of DNA. Nucleic Acids Res 17:8543–8551
Google Scholar - Sebastiano M, Lassandro F, Bazzicalupo P (1991) cut-1, a Caenorhabditis elegans gene coding for a dauer-specific non-collagenous component of the cuticle. Dev Biol 146:519–530
Google Scholar - Smith GE, Summers MO (1980) The bidirectional tranfer of DNA and RNA to nitrocellulose or DBM paper. Anal Biochem 109:123–129
Google Scholar - Snutch TP (1984) A molecular and genetic analysis of the heat shock response of Caenorhabditis elegans. Ph.D. Thesis, Simon Fraser University, Burnaby, B.C., Canada
Google Scholar - Von Heijne G (1986) A new method for predicting signal sequence cleavage sites. Nucleic Acids Res 14:4683–4690
Google Scholar - Wilson R et al. (1994) 2.2 Mb of contiguous nucleotide sequence from chromosome III of C. elegans. Nature 368:32–38
Google Scholar - Wood WB (1988) The nematode Caenorhabditis elegans. Cold Spring Harbor Laboratory, Cold Spring Harbor, New York
Google Scholar - Wood WB, Hecht R, Carr S, Vanderslice R, Wolf N, Hirsh D (1980) Parental effects and phenotypic characterization of mutations that affect early development in Caenorhabditis elegans. Dev Biol 74:446–469
Google Scholar