Protein fold recognition (original) (raw)

References

  1. Chou, P.Y. and Fasman, G.D., Biochemistry, 13 (1974) 212.
    Google Scholar
  2. Garnier, J., Osguthorpe, D.J. and Robson, B., J. Mol. Biol., 120 (1978) 97.
    Article CAS Google Scholar
  3. Taylor, W.R., In Bishop, M.J. and Rawlings, C.J. (Eds.) Nucleic Acid and Protein Sequence Analysis; a Practical Approach, IRL Press, Oxford, 1987, pp. 359–385.
    Google Scholar
  4. Fasman, G.D., Prediction of Protein Structure and the Principles of Protein Conformation, Plenum Press, New York, 1989.
    Google Scholar
  5. Nagano, K., J. Mol. Biol., 109 (1977) 251.
    CAS Google Scholar
  6. Nagano, K., J. Mol. Biol., 138 (1980) 797.
    Article CAS Google Scholar
  7. Taylor, W.R. and Thornton, J.M., Nature, 301 (1983) 540.
    Article CAS Google Scholar
  8. Bernstein, F.C., Koetzle, T.F., Williams, G.JB., Meyer, E.F., Brice, M.D., Rodgers, J.R., Kennard, O., Shimanouchi, T. and Tasumi, M., J. Mol. Biol., 112 (1977) 535.
    CAS Google Scholar
  9. Taylor, W.R., J. Mol. Biol., 188 (1986a) 233.
    Article CAS Google Scholar
  10. Taylor, W.R., J. Theor. Biol., 119 (1986b) 233.
    Google Scholar
  11. Pearl, L.H. and Taylor, W.R., Nature, 328 (1987) 351.
    Google Scholar
  12. Bashford, D., Chothia, C. and Lesk, A.M., J. Mol. Biol., 196 (1987) 199.
    Article CAS Google Scholar
  13. Gribskov, M., Lüthy, R. and Eisenberg, D., Methods Enzymol., 188 (1990) 146.
    Google Scholar
  14. Barton, G.J., Methods Enzymol., 188 (1990) 403.
    Google Scholar
  15. Pastore, A. and Lesk, A.M., Proteins, 8 (1990) 133.
    Article CAS Google Scholar
  16. Rooman, M.J., Kocher, J.P.A. and Wodak, S.J., J. Mol. Biol., 221 (1991) 961.
    Article CAS Google Scholar
  17. Chan, H.S. and Dill, K.A., Proc. Natl. Acad. Sci. U.S.A., 87 (1990) 6388.
    CAS Google Scholar
  18. Doolittle, R.F., Protein Sci., 1 (1992) 191.
    CAS Google Scholar
  19. Flores, T.P., Orengo, C.A., Moss, D.S. and Thornton, J.M., Protein Sci., submitted.
  20. Farber, G.K. and Petsko, G.A., Trends Biochem. Sci., 15 (1990) 228.
    Article CAS Google Scholar
  21. Chothia, C. and Finkelstein, A.V., Annu. Rev. Biochem., 59 (1990) 1007.
    Article CAS Google Scholar
  22. Orengo, C.A., Flores, T.P., Taylor, W.R. and Thornton, J.M., Protein Eng., in press.
  23. Chothia, C., Nature, 357 (1992) 543.
    Article CAS Google Scholar
  24. Drexler, K.E., Proc. Natl. Acad. Sci. U.S.A., 78 (1981) 5275.
    CAS Google Scholar
  25. Novotny, J., Bruccoleri, R.E. and Karplus, M., J. Mol. Biol., 177 (1984) 787.
    CAS Google Scholar
  26. Brooks, B., Bruccoleri, R.E., Olafson, B.D., States, D.J., Swaminathan, S. and Karplus, M., J. Comput. Chem., 4 (1983) 187.
    Article CAS Google Scholar
  27. Novotny, J., Rashin, A.A. and Bruccoleri, R.E., Proteins, 4 (1988) 19.
    CAS Google Scholar
  28. Eisenberg, D. and McLachlan, A.D., Nature, 319 (1986) 199.
    Article CAS Google Scholar
  29. Baumann, G., Frommel, C. and Sander, C., Protein Eng., 2 (1989) 329.
    CAS Google Scholar
  30. Holm, L. and Sander, C., J. Mol. Biol., 225 (1992) 93.
    Article CAS Google Scholar
  31. Gregoret, L.M. and Cohen, F.E., J. Mol. Biol., 211 (1990) 959.
    Article CAS Google Scholar
  32. Hendlich, M., Lackner, P., Weitckus, S., Floeckner, H., Froschauer, R., Gottsbacher, K., Casari, G. and Sippl, M.J., J. Mol. Biol., 216 (1990) 167.
    CAS Google Scholar
  33. Sippl, M.J., J. Mol. Biol., 213 (1990) 859.
    CAS Google Scholar
  34. Casari, G. and Sippl, M.J. (1983) J. Mol. Biol., 224 (1992) 725.
    Article CAS Google Scholar
  35. Crippen, G.M., Biochemistry, 30 (1991) 4232.
    Article CAS Google Scholar
  36. Maiorov, V.N. and Crippen, G.M., J. Mol. Biol., 227 (1992) 876.
    Article CAS Google Scholar
  37. Ponder, J.W. and Richards, F.M., J. Mol. Biol., 193 (1987) 775.
    Article CAS Google Scholar
  38. Bowie, J.U., Clarke, N.D., Pabo, C.O. and Sauer, R.T., Proteins, 7 (1990) 257.
    Article CAS Google Scholar
  39. Bowie, J.U., Lüthy, R. and Eisenberg, D., Science, 253 (1991) 164.
    CAS Google Scholar
  40. Lüthy, R., Bowie, J.K. and Eisenberg, D., Nature, 356 (1992) 83.
    Article Google Scholar
  41. Bork, P., Sander, C. and Valencia, A., Proc. Natl. Acad. Sci. U.S.A., 89 (1992) 7290.
    CAS Google Scholar
  42. Finkelstein, A.V. and Reva, B.A., Nature, 351 (1991) 497.
    Article CAS Google Scholar
  43. Fauchere, J.L. and Pliska, V.E., Eur. J. Med. Chem., 18 (1983) 369.
    CAS Google Scholar
  44. Jones, D.T., Taylor, W.R. and Thornton, J.M., Nature, 358 (1992) 86.
    Article CAS Google Scholar
  45. Needleman, S.B. and Wunsch, C.D., J. Mol. Biol., 48 (1970) 443.
    Article CAS Google Scholar
  46. Taylor, W.R. and Orengo, C.A., J. Mol. Biol., 208 (1989) 1.
    Article CAS Google Scholar
  47. Kabsch, W. and Sander, C., Biopolymers, 22 (1983) 2577.
    Article CAS Google Scholar
  48. Kraulis, P.J., Science, 254 (1991) 581.
    CAS Google Scholar
  49. Vriend, G. and Sander, C., Proteins, 11 (1991) 52.
    Article CAS Google Scholar
  50. Benner, S.A. and Gerloff, D., Adv. Enz. Reg., 31 (1991) 52.
    Google Scholar
  51. Thornton, J.M., Flores, T.P., Jones, D.T. and Swindells, M.B., Nature, 354 (1991) 105.
    Article CAS Google Scholar
  52. Lesk, A.M. and Boswell, D.R., Bioessays, 14 (1992) 407.
    Article CAS Google Scholar
  53. Benner, S.A., Cohen, M.A. and Gerloff, D., Nature, 359 (1992) 781.
    Article CAS Google Scholar
  54. Taylor, W.R., Protein Eng., 4 (1991) 853.
    CAS Google Scholar
  55. Murzin, A.G. and Finkelstein, A.V., Biofizika, 28 (1983) 905.
    Google Scholar
  56. Godzik, A., Kolinski, A. and Skolnick, J., J. Mol. Biol., 227 (1992) 227.
    Article CAS Google Scholar
  57. Hutchinson, E.G. and Thornton, J.M., Proteins, 8 (1990) 203.
    Article CAS Google Scholar

Download references