Anderson JA, Churchill GA, Sutrique JE, Tanksley SD, Sorrells ME (1993) Optimizing parental selection for genetic linkage maps. Genome 36:181–186 CAS Google Scholar
Ayers NM, McClung AM, Larkin PD, Bligh HFJ, Jones CA, Park WD (1997) Microsatellite and single nucleotide polymorphism differentiate apparent amylose classes in an extended pedigree of US rice germplasm. Theor Appl Genet 94:773–781 CAS Google Scholar
Baquerizo-Audiot E, Desplanque B, Prosperi JM, Santoni S (2001) Characterization of microsatellite loci in the diploid legume Medicago truncatula (barrel medic). Mol Ecol Notes 1:1–3 CAS Google Scholar
Barnes DK, Goplen BP, Baylor JE (1988) Highlights in the USA and Canada. In: Hanson AA, Barnes DK, Hill RR (eds) Alfalfa and alfalfa improvement. Agronomy Monograph No. 29, American Society of Agronomy – Crop Science Society of America– Soil Science Society of America, Madison, Wis., USA, pp1–24
Botstein D, White RL, Skolnick M, Davis RW (1980) Construction of genetic linkage map in man using restriction fragment length polymorphisms. Am J Hum Genet 32:314–331 CASPubMed Google Scholar
Brown-Guedira GL, Thomson JA, Nelson RL, Warburton ML (2000) Evaluation of genetic diversity of soybean introductions and North American ancestors using RAPD and SSR markers. Crop Sci 40:815–823 CAS Google Scholar
Cho YG, Ishii T, Temnykh S, Chen X, Lipovich L, McCouch SR, Parl WD, Ayers N, Cartinhour S (2000) Diversity of microsatellites derived from genomic libraries and GenBank sequences in rice (Oryza sativa L.). Theor Appl Genet 100:713–722 CAS Google Scholar
Danesh D, Shekhawat NS, Cardinet G, Thoquet P, Mudge J, Penuela S, Kim D, Kiss G, Choi H, Limpens E, Zeyen R, Huguet T, Cook DR, Young ND (2002) Integrated microsatellite marker mapping and powdery mildew resistance in Medicago truncatula (abstract). In: Plant and Animal Genome X. The International Conference on the Status of Plant and Animal Genome Research, 12–16 January 2002, San Diego, Calif., pp 196
Diwan N, Bhaqwat AA, Bauchan GB, Cregan PB (1997) Simple sequence repeats DNA markers in alfalfa and perennial and annual Medicago species. Genome 40:887–895 CAS Google Scholar
Diwan N, Bouton JH, Kochert G, Cregan PB (2000) Mapping of simple sequence repeat (SSR) DNA markers in diploid and tetraploid alfalfa. Theor Appl Genet 101:165–172 CAS Google Scholar
Doyle JJ, Doyle JL, Ballenger JA, Palmer JD (1996) The distribution and phylogenetic significance of a 50-kb chloroplast DNA inversion in the flowering plant family Leguminosae. Mol Phylogenet Evol 5:429–438 ArticleCASPubMed Google Scholar
Eujayl I, Sorrells ME, Wolters P, Baum M, Powell W (2002) Isolation of EST- derived microsatellite markers for genotyping the A and B genomes of wheat. Theor Appl Genet 104:399–407 CAS Google Scholar
Gaitán-Solís E, Duque MC, Edwards KJ, Tohme J (2002) Microsatellite repeats in common bean (Phaseolus vulgaris): isolation, characterization, and cross-species amplification in Phaseolus ssp. Crop Sci 42:2128–2136 Google Scholar
Huguet T, Thoquet P, Gherardi M, Kereszt A, Ane JM, Vilotte L, Cardinet G, Baquerizo E, Santoni S, Prosperi JM (2001) The molecular linkage map of the model legume Medicago truncatula: a tool for legume genome comparison and gene mapping. In: 4th Workshop on Medicago truncatula. 7–10 July 2001, University of Wisconsin-Madison, Wis., pp 51
Kaló P, Endre G, Zimnyi L, Csanadi G, Kiss GB (2000) Construction of an improved linkage map of diploid alfalfa (Medicago sativa). Theor Appl Genet 100:641–657 Article Google Scholar
Kantety RV, Rota ML, Matthews DE, Sorrells ME (2002) Data mining for simple-sequence repeats in expressed sequence tags from barley, maize, rice, sorghum, and wheat. Plant Mol Biol 48:501–510 ArticleCASPubMed Google Scholar
Kilian A, Chen J, Han F, Steffenson B, Kleinhofs A (1997) Towards map-based cloning of the barley stem rust resistance genes Rpg1 and rpg4 using rice as an intergenomic cloning vehicle. Plant Mol Biol 35:187–195 CASPubMed Google Scholar
Laurent P, Elduque C, Hayes H, Saunier K, Eggen A, Leveziel H (2000) Assignment of 60 human ESTs in cattle. Mammal Genome 11:748–754 ArticleCAS Google Scholar
Nei M, Li WH (1979) Mathematical model for studying genetic variation in terms of restriction endonucleases. Proc Natl Acad Sci 76:5269–5273 CASPubMed Google Scholar
Paterson AH, Lin YR, Li S, Schertz KF, Doebley JF, Pinson SRM, Liu SC, Stansel JW, Irvine JE (1995) Convergent domestication of cereal crops by independent mutations at corresponding genetic loci. Science 269:1714–1717 CAS Google Scholar
Peakall R, Gilmore S, Keys W, Morgante M, Rafalski A (1998) Cross species amplification of soybean (Glycine max) simple sequence repeat (SSRs) within the genus and other legume genera: implication for transferability of SSRs in plants. Mol Biol Evol 15:1275–1287 CASPubMed Google Scholar
Rebeiz M, Lewin HA (2000) COMPASS of 47,787 cattle ESTs. Anim Biotechnol 11:175–241 Google Scholar
Roa AC, Chavarriaga-Aguirre P, Duque MC, Maya MM, Bonierbale MW, Iglesias C, Tohme J (2000) Cross-species amplification of cassava (Manihot esculenta) (Euphorbiaceae) microsatellites: allelic polymorphism and degree of relationship. Am J Bot 87:1647–1655 Google Scholar
SAS Institute (1989) SAS/STAT user's guide, version 6, 4th edn, vol 1. SAS Institute, Cary, N.C.
Scott KD, Eggler P, Seaton G, Rossetto M, Ablett EM, Lee LS, Henry RJ (2000) Analysis of SSRs derived from grape ESTs. Theor Appl Genet 100:723–726 CAS Google Scholar
Temnykh S, Park WD, Ayers N, Cartinhour S, Hauck N, Lipovich L, Cho YG, Ishii T, McCouch SR (2000) Mapping and genome organization of microsatellite sequences in rice (Oryza sativa L.). Theor Appl Genet 100:697–712 CAS Google Scholar
Thoquet P, Ghérardi M, Journet E, Kereszt A, Ané JM, Prosperi JM, Huguet T (2002) The molecular genetic linkage map of the model legume Medicago truncatula: an essential tool for comparative legume genomics and the isolation of argonomically important genes. BMC Plant Biology 2:1–19 ArticlePubMed Google Scholar
Tugendreich S, Boguski M, Seldini MS, Hieter P (1993) Linking yeast genetics to mammalian genomes: identification and mapping of the human homolog of CDC27 via the expressed sequence tag (EST) database. Proc Natl Acad Sci 90:10031–10035 CASPubMed Google Scholar
Weber JL (1990) Informativeness of human (dC-dA)n (dG-dT)n polymorphisms. Genomics 7:524–530 PubMed Google Scholar
White G, Powell W (1997) Isolation and characterization of microsatellite loci in Swietenia humilis (Meliaceae): an endangered tropical hardwood species. Mol Ecol 6:851–860 CAS Google Scholar
Wu KK, Burnquist W, Sorrells ME, Tew TL, Moore PH, Tanksley SD (1992) The detection and estimation of linkage in polyploids using single dose restriction fragments. Theor Appl Genet 83:294–300 Google Scholar