Genetic variability of Italian southern Scots pine (Pinus sylvestris L.) populations: the rear edge of the range (original) (raw)
Accorsi CA, Bandini Mazzanti M, Bertolani Marchetti D, De Leonardis W, Forlani L, Piccione V (1983) Flora Palinologica Italiana. Schede elaborate tramite computer. Arch Bot Biogeogr Ital 59:55–104 Google Scholar
Afzal-Rafii Z, Dodd RS (2007) Chloroplast DNA supports a hypothesis of glacial refugia over postglacial recolonization in disjunct populations of black pine (Pinus nigra) in western Europe. Mol Ecol 16:723–736. doi:10.1111/j.1365-294X.2006.03183.x ArticlePubMedCAS Google Scholar
Agostini R (1972) Significato e lineamenti delle pinete relitte di pino silvestre (Pinus sylvestris L.) dell’Apennino Emiliano. Acc Ital Sci For 21:171–212 Google Scholar
Aguilar R, Ashworth L, Galetto L, Aizen MA (2006) Plant reproductive susceptibility to habitat fragmentation: review and synthesis through a meta-analysis. Ecol Lett 9:968–980. doi:10.1111/j.1461-0248.2006.00927.x ArticlePubMed Google Scholar
Antonaroli R, Bagnaresi U, Ferrari C, Speranza M (1987) Indagine su alcuni caratteri morfologici del pino silvestre (Pinus sylvestris L.) in popolamenti spontanei dell’Appenino emiliano. Acc Ital Sci For 34:151–160 Google Scholar
Arnaud-Haond S, Teixeira S, Massa SI, Billot C, Saenger P, Coupland G, Duarte CM, Serrão EA (2006) Genetic structure at range edge: low diversity and high inbreeding in Southeast Asian mangrove (Avicennia marina) populations. Mol Ecol 15:3515–3525. doi:10.1111/j.1365-294X.2006.02997.x ArticlePubMedCAS Google Scholar
Bacles CFE, Lowe AJ, Ennos RA (2004) Genetic effects of chronic habitat fragmentation on tree species: the case of Sorbus aucuparia in a deforested Scottish landscape. Mol Ecol 13:573–584. doi:10.1046/j.1365-294X.2004.02093.x ArticlePubMedCAS Google Scholar
Baucom RS, Estill JC, Cruzan MB (2005) The effect of deforestation on the genetic diversity and structure in Acer saccharum (Marsh): evidence for the loss and restructuring of genetic variation in a natural system. Conserv Genet 6:39–50. doi:10.1007/s10592-004-7718-9 Article Google Scholar
Bazzi R (1984) Indagini palinologiche su Pinus sylvestris L. subsp. sylvestris, ecotipo emiliano. Tesi di laurea in Scienze Naturali. University of Bologna (A.A. 1984–1985)
Bernetti G (1995) Selvicoltura speciale. Unione tipografico-editrice Torinese, Torino, pp 124–131 Google Scholar
Bilgen BB, Kaya N (2007) Allozyme variations in six natural populations of scots pine (Pinus sylvestris) in Turkey. Biologia 62:697–703. doi:10.2478/s11756-007-0127-z Article Google Scholar
Burczyk J, Lewandowski A, Chalupa W (2004) Local pollen dispersal and distant gene flow in Norway spruce (Picea abies [L.] Karst.). For Ecol Manag 197:39–48. doi:10.1016/j.foreco.2004.05.003 Article Google Scholar
Cheddadi R, Vendramin GG, Litt T, Francois L, Kageyama M, Lorentz S, Laurent JM, deBeaulieu JL, Sadori L, Jost A, Lunt D (2006) Imprints of glacial refugia in the modern genetic diversity of Pinus sylvestris. Glob Ecol Biogeogr 15:271–282 Google Scholar
Comps B, Gomory D, Letouzey J, Thiebaut B, Petit RJ (2001) Diverging trends between heterozygosity and allelic richness during postglacial colonization in the European beech. Genetics 157:389–397 PubMedCAS Google Scholar
Cornuet JM, Luikart G (1996) Description and evaluation of two tests for detecting recent bottlenecks. Genetics 144:2001–2014 PubMedCAS Google Scholar
Dick CW, Abdul-Salim K, Bermingham E (2003) Molecular systematic analysis reveals cryptic tertiary diversification of a widespread tropical rain forest tree. Am Nat 162:691–703. doi:10.1086/379795 ArticlePubMed Google Scholar
Doyle JJ, Doyle JL (1990) Isolation of plant DNA from fresh tissue. Focus 12:13–15 Google Scholar
Eckert CG, Samis KE, Lougheed SC (2008) Genetic variation across species’ geographical ranges: the central–marginal hypothesis and beyond. Mol Ecol 17:1170–1188 ArticlePubMedCAS Google Scholar
El Mousadik A, Petit RJ (1996) High level of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L.) Skeels] endemic to Morocco. Theor Appl Genet 92:832–839. doi:10.1007/BF00221895 Article Google Scholar
Fady B, Lefèvre F, Vendramin GG, Ambert A, Regnier C, Bariteau M (2008) Genetic consequences of past climate and human impact on eastern Mediterranean Cedrus libani forests. Implications for their conservation. Conserv Genet 9(1):85–95. doi:10.1007/s10592-007-9310-6 Article Google Scholar
Ferrazzini D, Monteleone I, Belletti P (2008) Small-scale genetic diversity in oneseed hawthorn (Crataegus monogyna Jacq.). Eur J For Res 127(5):407–414. doi:10.1007/s10342-008-0224-8 CAS Google Scholar
Goncharenco GG, Silin AE, Paddutov VE (1994) Allozyme variation in natural populations of Eurasian Pines. Silvae Genet 43:119–132 Google Scholar
Gonzalez-Martinez SC, Bravo F (2001) Density and population structure of the natural regeneration of Scots pine (Pinus sylvestris L.) in the High Ebro Basin (Northern Spain). Ann Sci 58:277–288. doi:10.1051/forest:2001126 Article Google Scholar
Gonzalez-Martinez SC, Gerber S, Cervera MT, Martinez-Zapater JM, Gil L, Alia R (2002) Seed gene flow and fine-scale structure in a Mediterranean pine (Pinus pinaster Ait.) using nuclear microsatellite markers. Theor Appl Genet 104:1290–1297. doi:10.1007/s00122-002-0894-4 ArticlePubMedCAS Google Scholar
Gonzalez-Martinez SC, Burczyk J, Nathan R, Nanos N, Gil L, Alia R (2006) Effective gene dispersal and female reproductive success in Mediterranean maritime pine (Pinus pinaster Aiton). Mol Ecol 15:4577–4588. doi:10.1111/j.1365-294X.2006.03118.x ArticlePubMed Google Scholar
Huntley B, Birks HJB (1983) An atlas of past and present pollen maps for Europe: 0–13000 years ago. Cambridge University Press, Cambridge Google Scholar
Labra M, Grassi F, Sgorbati S, Ferrari C (2006) Distribution of genetic variability in southern populations of Scots pine (Pinus sylvestris L.) from the Alps to the Apennines. Flora 201:468–476 Google Scholar
Lemes MR, Gribel R, Proctor J, Grattapaglia D (2003) Population genetic structure of mahogany (Swietenia macrophylla King, Meliaceae) across the Brazilian Amazon, based on variation at microsatellite loci: implications for conservation. Mol Ecol 12:2875–2883. doi:10.1046/j.1365-294X.2003.01950.x ArticlePubMed Google Scholar
Lowe AJ, Boshier D, Ward M, Bacles CFE, Navarro C (2005) Genetic resource impacts of habitat loss and degradation; reconciling empirical evidence and predicted theory for neotropical trees. Heredity 95:255–273. doi:10.1038/sj.hdy.6800725 ArticlePubMedCAS Google Scholar
Miyamoto N, Fernandez-Manjarres JF, Morand-Prieur ME, Bertolino P, Frascaria-Lacoste N (2008) What sampling is needed for reliable estimations of genetic diversity in Fraxinus excelsior L. (Oleaceae). Ann Sci 65:403–410 Article Google Scholar
Muir G, Lowe AJ, Fleming CC, Vogl C (2004) High nuclear genetic diversity, high levels of outcrossing and low differentiation among remnant populations of Quercus petraea at the margin of its range in Ireland. Ann Bot (Lond) 93:691–697. doi:10.1093/aob/mch096 ArticleCAS Google Scholar
Naydenov K, Senneville S, Beaulieu J, Tremblay F, Bousquet J (2007) Glacial vicariance in Eurasia: mitochondrial DNA evidence from Scots pine for a complex heritage involving genetically distinct refugia at mid-northern latitudes and in Asia Minor. BMC Evol Biol 7:233–244. doi:10.1186/1471-2148-7-233 ArticlePubMedCAS Google Scholar
Nei M (1978) Estimation of average heterozygosity and genetic distance from a small number of individuals. Genetics 89:583–590 PubMed Google Scholar
O’Connell LM, Mosseler A, Rajora OP (2006) Impacts of forest fragmentation on the mating system and genetic diversity of white spruce (Picea glauca) at the landscape level. Heredity 97:418–426. doi:10.1038/sj.hdy.6800886 ArticlePubMedCAS Google Scholar
Pearl M (1992) Conservation of Asian primates: aspects of genetics and behavioral ecology that predict vulnerability. In: Fiedler PL, Jain SK (eds) Conservation biology: the theory and practice of nature conservation preservation and management. Chapman and Hall, New York, pp 297–320 Google Scholar
Persson H, Widen B, Andersson S, Svensson L (2004) Allozyme diversity and genetic structure of marginal and central populations of Corylus avellana L. (Betulaceae) in Europe. Plant Syst Evol 244:157–179. doi:10.1007/s00606-003-0073-3 Article Google Scholar
Petit RJ, Aguinagalde I, de Beaulieu JL, Bittkau C, Brewer S, Cheddadi R, Ennos R, Fineschi S, Grivet D, Lascoux M, Mohanty A, Müller-Starck G, Demesure-Musch B, Palmé A, Martín JP, Rendell S, Vendramin GG (2003) Glacial refugia: hotspots but not melting pots of genetic diversity. Science 300:1563–1565. doi:10.1126/science.1083264 ArticlePubMedCAS Google Scholar
Pritchard JK, Stephens M, Donnelly P (2000) Inference of population structure using multilocus genotype data. Genetics 155:945–959 PubMedCAS Google Scholar
Provan J, Soranzo N, Wilson NJ, McNicol JW, Forrest GI, Cottrell J, Powell W (1998) Gene-pool variation in Caledonian and European Scots pine (Pinus sylvestris L.) revealed by chloroplast simple-sequence repeats. P R Soc Lond B Biol 265:1697–1705. doi:10.1098/rspb.1998.0491 ArticleCAS Google Scholar
Prus-Glowacki B, Stephan BR, Bujas E, Alia R, Marciniak A (2003) Genetic differentiation of autochtonous populations of Pinus sylvestris (Pinaceae) from the Iberian Peninsula. Plant Syst Evol 239:55–66. doi:10.1007/s00606-002-0256-3 Article Google Scholar
Puglisi S, Attolico M (2000) Allozyme variation in natural populations of the Italian range of Pinus sylvestris L. For Genet 7:221–232 Google Scholar
Pyhäjärvi T, Garcia-Gil MR, Knurr T, Mikkonen M, Wachowiak W, Savolainen O (2007) Demographic history has influenced nuclear diversity in european Pinus sylvestris populations. Genetics 177:1713–1724. doi:10.1534/genetics.107.077099 ArticlePubMedCAS Google Scholar
Pyhäjärvi T, Salmela MJ, Savolainen O (2008) Colonization routes of Pinus sylvestris inferred from distribution of mitochondrial DNA variation. Tree Genet Genomes 4:247–254. doi:10.1007/s11295-007-0105-1 Article Google Scholar
Robledo Arnuncio JJ, Gil L (2005) Patterns of pollen dispersal in a small population of Pinus sylvestris L. revealed by total-exclusion paternity analysis. Heredity 94:13–22. doi:10.1038/sj.hdy.6800542 ArticlePubMedCAS Google Scholar
Robledo Arnuncio JJ, Collada C, Alia R, Gil L (2005) Genetic structure of montane isolates of Pinus sylvestris L. in a Mediterranean refugial area. J Biogeogr 32:595–605. doi:10.1111/j.1365-2699.2004.01196.x Article Google Scholar
Rossetto M, Jones R, Hunter J (2004) Genetic effects of rainforest fragmentation in an early successional tree (Elaeocarpus grandis). Heredity 93:610–618. doi:10.1038/sj.hdy.6800585 ArticlePubMedCAS Google Scholar
Sinclair WT, Morman JD, Ennos RA (1999) The postglacial history of Scots pine (Pinus sylvestris L.) in Western Europe: evidence from mitochondrial DNA variation. Mol Ecol 8:83–88. doi:10.1046/j.1365-294X.1999.00527.x Article Google Scholar
Soranzo N, Provan J, Powell W (1998) Characterization of microsatellite loci in Pinus sylvestris L. Mol Ecol 7:1260–1261 PubMedCAS Google Scholar
Soranzo N, Alia R, Provn J, Powell W (2000) Patterns of variation at a mitochondrial sequence-tagged site locus provides new insights into the postglacial history of European Pinus sylvestris populations. Mol Ecol 9:1205–1211. doi:10.1046/j.1365-294x.2000.00994.x ArticlePubMedCAS Google Scholar
Stevens G (1992) Spilling over the competitive limits to species coexistence. In: Edlridge N (ed) Systematics, ecology, and the biodiversity crisis. Columbia University Press, New York, pp 40–58 Google Scholar
Turna I (2003) Variation of some morphological and electrophoretic characters of 11 populations of Scot pine in Turkey. Isr J Plant Sci 51:223–230. doi:10.1560/M4RX-QBGM-JVYQ-74B8 Article Google Scholar
Van Oosterhout C, Hutchinson WF, Wills DPM, Shipley P (2004) MICRO-CHECKER: software for identifying and correcting genotyping errors in microsatellite data. Mol Ecol Notes 4:535–538. doi:10.1111/j.1471-8286.2004.00684.x ArticleCAS Google Scholar
Vander Wall SB (2003) Effects of seed size of wind-dispersed pines (Pinus) on secondary seed dispersal and the caching behavior of rodents. Oikos 100:25–34. doi:10.1034/j.1600-0706.2003.11973.x Article Google Scholar
Vendramin GG, Anzidei M, Madaghiele A, Bucci G (1998) Distribution of genetic diversity in Pinus pinaster Ait. As revealed by chloroplast microsatellites. Theor Appl Genet 97:456–463. doi:10.1007/s001220050917 ArticleCAS Google Scholar
Vucetich JA, Waite TA (2003) Spatial patterns of demography and genetic processes across the species range: null hypotheses for landscape conservation genetics. Conserv Genet 4:639–645. doi:10.1023/A:1025671831349 Article Google Scholar
Ward M, Dick CW, Gribel R, Lowe AJ (2005) To self, or not to self… A review of outcrossing and pollen mediated gene flow in neotropical tree. Heredity 94:246–254. doi:10.1038/sj.hdy.6800712 ArticleCAS Google Scholar
Weir BS, Cockerham CC (1984) Estimating _F_-statistics for the analysis of population structure. Evol Int J Org Evol 38:1358–1370. doi:10.2307/2408641 Google Scholar
Williams DA, Wang YQ, Borchetta M, Gaines MS (2007) Genetic diversity and spatial structure of a keystone species in fragmented pine rockland habitat. Biol Conserv 138:256–268. doi:10.1016/j.biocon.2007.04.024 Article Google Scholar
Wolfe KH, Li WH, Sharp PM (1987) Rates of nucleotide substitution vary greatly among plant mitochondrial, chloroplast, and nuclear DNAs. Proc Natl Acad Sci USA 84:9054–9058. doi:10.1073/pnas.84.24.9054 ArticlePubMedCAS Google Scholar