QTL mapping of stripe, leaf and stem rust resistance genes in a Kariega × Avocet S doubled haploid wheat population (original) (raw)

References

• Akbari M, Wenzl P, Caig V, Carling J, Xia L, Yang S, Uszynski G, Mohler V, Lehmensiek A, Kuchel H, Hayden MJ, Howes N, Sharp PJ, Vaughan P, Rathmell B, Huttner E, Kilian A (2006) Diversity array technology (DArT) for high-throughput profiling of the hexaploid wheat genome. Theor Appl Genet 113:1409–1420
  Article CAS PubMed Google Scholar
• Appels R (2003) A consensus molecular genetic map for wheat—a cooperative international effort. In: Progna NE (ed) Proceeding of the 10th international wheat genetics symposium_._ Paestum, Italy, pp 211–214
• Börner A, Schumann E, Furste A, Cöster H, Leithold B, Röder MS, Weber WE (2002) Mapping of quantitative trait loci determining agronomic important characters in hexaploid wheat (Triticum aestivum L.). Theor Appl Genet 105:921–936
  Article PubMed Google Scholar
• Boshoff WHP, Pretorius ZA (1999) A new pathotype of Puccinia striiformis f. sp. tritici on wheat in South Africa. Plant Dis 83:591
  Article Google Scholar
• Boukhatem N, Baret PV, Mingeot D, Jacquemin JM (2002) Quantitative trait loci for resistance against yellow rust in two wheat-derived recombinant inbred line populations. Theor Appl Genet 104:111–118
  Article CAS PubMed Google Scholar
• Campbell CL, Madden LV (1990) Introduction to plant disease epidemiology. Wiley, New York
  Google Scholar
• Carter AH, Chen XM, Garland-Campbell K, Kidwell KK (2009) Identifying QTL for high-temperature adult-plant resistance to stripe rust (Puccinia striiformis f. sp. tritici) in the spring wheat (Triticum aestivum L.) cultivar ‘Louise’. Theor Appl Genet 119:1119–1128
  Article PubMed Google Scholar
• Chen XM (2007) Challenges and solutions for stripe rust control in the United States. Aust J Agric Res 58:648–655
  Article Google Scholar
• Collard BCY, Jahufer MZZ, Brouwer JB, Pang ECK (2005) An introduction to markers, quantitative trait loci (QTL) mapping and marker-assisted selection for crop improvement. Euphytica 142:169–196
  Article CAS Google Scholar
• Collard B, Mace E, McPhail M, Wenzl P, Cakir M, Fox G, Poulsen D, Jordan D (2009) How accurate are the marker orders in crop linkage maps generated from large marker datasets? Crop Pasture Sci 60:362–372
  Article CAS Google Scholar
• Crossa J, Burgueno J, Dreisigacker S, Vargas M, Herrera-Foessel SA, Lillemo M, Singh RP, Trethowan R, Warburton M, Franco J, Reynolds M, Crouch JH, Ortiz R (2007) Association analysis of historical bread wheat germplasm using additive genetic covariance of relatives and population structure. Genetics 177:1889–1913
  Article CAS PubMed Google Scholar
• Dangl JJ, Jones JDG (2001) Plant pathogens and integrated defense responses to infection. Nature 411:826–833
  Article CAS PubMed Google Scholar
• Doerge RW, Churchill GA (1996) Permutation tests for multiple loci affecting a quantitative character. Genetics 142:285–294
  CAS PubMed Google Scholar
• German S, Barcellos A, Chaves M, Kohli M, Campos P, De Viedma L (2007) The situation of common wheat rusts in the Southern Cone of America and perspectives for control. Aust J Agric Res 58:620–630
  Article Google Scholar
• Guo Q, Zhang ZJ, Xu YB, Li GH, Feng J, Zhou Y (2008) Quantitative trait loci for high-temperature adult-plant and slow-rusting resistance to Puccinia striiformis f. sp. tritici in wheat cultivars. Phytopathology 98:803–809
  Article CAS PubMed Google Scholar
• Hovmoller MS, Justesen AF (2007) Appearance of atypical Puccinia striiformis f. sp. tritici phenotypes in north-western Europe. Aust J Agric Res 58:518–524
  Article Google Scholar
• Hovmoller MS, Yahyaoui A, Milus EA, Justesen AF (2008) Rapid spread of two aggressive strains of a wheat rust fungus. Mol Ecol 17:3818–3826
  Article PubMed Google Scholar
• Jaccoud D, Peng K, Feinstein D, Kilian A (2001) Diversity arrays: a solid state technology for sequence information independent genotyping. Nucleic Acids Res 29:e25
  Article CAS PubMed Google Scholar
• Krattinger SG, Lagudah ES, Spielmeyer W, Singh RP, Huerta-Espino J, McFadden H, Bossolini E, Selter LL, Keller B (2009) A putative ABC transporter confers durable resistance to multiple fungal pathogens in wheat. Science 323:1360–1363
  Article CAS PubMed Google Scholar
• Lagudah ES, McFadden H, Singh RP, Huerta-Espino J, Bariana HS, Spielmeyer W (2006) Molecular genetic characterization of the Lr34/Yr18 slow rusting resistance gene region in wheat. Theor Appl Genet 114:21–30
  Article CAS PubMed Google Scholar
• Lagudah ES, Krattinger SG, Herrera-Foessel S, Singh RP, Huerta-Espino J, Spielmeyer W, Brown-Guedira G, Selter LL, Keller B (2009) Gene-specific markers for the wheat gene Lr34/Yr18/Pm38 which confers resistance to multiple fungal pathogens. Theor Appl Genet 119:889–898
  Article CAS PubMed Google Scholar
• Lehmensiek A, Eckermann PJ, Verbyla AP, Appels R, Sutherland MW, Daggard GE (2005) Curation of wheat maps to improve map accuracy and QTL detection. Aust J Agric Res 56:1347–1354
  Article Google Scholar
• Lin F, Chen XM (2009) Quantitative trait loci for non-race-specific, high-temperature adult-plant resistance to stripe rust in wheat cultivar express. Theor Appl Genet 118:631–642
  Article CAS PubMed Google Scholar
• Luo P, Hu X, Zhang H, Ren Z (2009) Genes for resistance to stripe rust on chromosome 2B and their application in wheat breeding. Prog Nat Sci 19:9–15
  Article CAS Google Scholar
• Mallard S, Gaudet D, Aldeia A, Abelard C, Besnard AL, Sourdille P, Dedryver F (2005) Genetic analysis of durable resistance to yellow rust in bread wheat. Theor Appl Genet 110:1401–1409
  Article CAS PubMed Google Scholar
• Manly KF, Cudmore RH Jr, Meer JM (2001) Map Manager QTX, cross-platform software for genetic mapping. Mamm Genome 12:930–932
  Article CAS PubMed Google Scholar
• McIntosh RA, Wellings CR, Park RF (1995) Wheat rusts: an atlas of resistance genes. CSIRO, Australia, pp 1–200
  Google Scholar
• Moldenhauer J, Moerschbacher BM, Van der Westhuizen AJ (2006) Histological investigation of stripe rust (Puccinia striiformis f. sp. tritici) development in resistant and susceptible wheat cultivars. Plant Pathol 55:469–474
  Article Google Scholar
• Moldenhauer J, Pretorius ZA, Moerschbacher BM, Prins R, Van der Westhuizen AJ (2008) Histopathology and PR-protein markers provide insight into adult plant resistance to stripe rust of wheat. Mol Plant Pathol 9:137–145
  Article CAS PubMed Google Scholar
• Pretorius ZA, Pakendorf KW, Marais GF, Prins R, Komen JS (2007a) Challenges for sustainable cereal rust control in South Africa. Aust J Agric Res 58:593–601
  Article Google Scholar
• Pretorius ZA, Pienaar L, Prins R (2007b) Greenhouse and field assessment of adult plant resistance in wheat to Puccinia striiformis f. sp. tritici. Aust Plant Pathol 36:552–559
  Article Google Scholar
• Prins R, Ramburan VP, Pretorius ZA, Boyd LA, Boshoff WHP, Smith PH, Louw JH (2005) Development of a doubled haploid mapping population and linkage map for the bread wheat cross Kariega × Avocet S. S Afr J Plant Soil 22:1–8
  CAS Google Scholar
• Ramburan VP, Pretorius ZA, Louw JH, Boyd LA, Smith PH, Boshoff WHP, Prins R (2004) A genetic analysis of adult plant resistance to stripe rust in the wheat cultivar Kariega. Theor Appl Genet 108:1426–1433
  Article CAS PubMed Google Scholar
• Rosewarne GM, Singh RP, Huerta-Espino J, Rebetzke GJ (2008) Quantitative trait loci for slow-rusting resistance in wheat to leaf rust and stripe rust identified with multi-environment analysis. Theor Appl Genet 116:1027–1034
  Article CAS PubMed Google Scholar
• Rubiales D, Niks RE (1995) Characterization of Lr34, a major gene conferring nonhypersensitive resistance to wheat leaf rust. Plant Dis 79:1208–1212
  Article Google Scholar
• Santra DK, Chen XM, Santra M, Campbell KG, Kidwell KK (2008) Identification and mapping QTL for high-temperature adult-plant resistance to stripe rust in winter wheat (Triticum aestivum L.) cultivar ‘Stephens’. Theor Appl Genet 117:793–802
  Article CAS PubMed Google Scholar
• Singh RP, Huerta-Espino J, William M (2001) Slow rusting gene based resistance to leaf and yellow rusts in wheat: genetics and breeding at CIMMYT. In: 10th Assembly proceedings of the Wheat Breeding Society of Australia Inc., Mildura, Australia. 16th–21st September 2001, pp 103–108
• Singh RP, Huerta-Espino J, William HM (2005) Genetics and breeding for durable resistance to leaf and stripe rusts in wheat. Turk J Agric For 29:121–127
  CAS Google Scholar
• Spielmeyer W, Singh RP, McFadden H, Wellings CR, Huerta-Espino J, Kong X, Appels R, Lagudah ES (2008) Fine scale genetic and physical mapping using interstitial deletion mutants of Lr34/Yr18: a disease resistance locus effective against multiple pathogens in wheat. Theor Appl Genet 116:481–490
  Article CAS PubMed Google Scholar
• Sui XX, Wang MN, Chen XM (2009) Molecular mapping of a stripe rust resistance gene in spring wheat cultivar Zak. Phytopathology 99:1209–1215
  Article CAS PubMed Google Scholar
• Van Os H, Stam P, Visser RGF, Van Eck HJ (2005) RECORD: a novel method for ordering loci on a genetic linkage map. Theor Appl Genet 112:30–40
  Article CAS PubMed Google Scholar
• Voorrips RE (2002) MapChart: Software for the graphical presentation of linkage maps and QTLs. J Hered 93:77–78
  Article CAS PubMed Google Scholar
• Wan A, Zhao Z, Chen X, He Z, Jin S, Jia Q, Yao G, Yang J, Wang B, Li G, Bi Y, Yuan Z (2004) Wheat stripe rust epidemic and virulence of Puccinia striiformis f. sp. tritici in China in 2002. Plant Dis 88:896–904
  Article Google Scholar
• Wang S, Basten CJ, Zeng Z-B (2007) Windows QTL Cartographer 2.5. Department of Statistics, North Carolina State University, Raleigh, NC (http://statgen.ncsu.edu/qtlcart/WQTLCart.htm)
• Wellings CR (2007) Puccinia striiformis f. sp tritici in Australia: a review of the incursion, evoluation, and adaptation of stripe rust in the period 1979–2005. Aust J Agric Res 58:567–575
  Article Google Scholar
• Wellings CR, Singh RP, McIntosh RA, Pretorius ZA (2004) The development and application of near isogenic lines for the wheat stripe (yellow) rust pathosystem. In: Proceedings of the 11th cereal rusts and powdery mildews conference Norwich UK, August 2004, p 39
• Wenzl P, Kudrna D, Jaccoud D, Huttner E, Kleinhofs A, Kilian A (2004) Diversity arrays technology (DArT) for whole-genome profiling of barley. Proc Natl Acad Sci USA 101(26):9915–9920
  Article CAS PubMed Google Scholar
• Wittenberg AH, Van der Lee T, Cayla C, Kilian A, Visser RG, Schouten HJ (2005) Validation of the high-throughput marker technology DArT using the model plant Arabidopsis thaliana. Mol Genet Genomics 274:30–39
  Article CAS PubMed Google Scholar
• Xia L, Peng K, Yang S, Wenzl P, Carmen de Vicente M, Fregene M, Kilian A (2005) DArT for high-throughput genotyping of cassava (Manihot esculenta) and its wild relatives. Theor Appl Genet 110:1092–1098
  Article CAS PubMed Google Scholar
• Yang S, Pang W, Ash G, Harper J, Carling J, Wenzl P, Huttner E, Zong X, Kilian A (2006) Low level of genetic diversity in cultivated Pigeonpea compared to its wild relatives is revealed by diversity arrays technology. Theor Appl Genet 113:585–595
  Article CAS PubMed Google Scholar

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