Xiangmin Xu • UCI Profiles (original) (raw)

  1. AAV9-Mimetic Peptides and Electroporation Synergistically Enhance Nanoparticle Transport through the Blood-Brain Barrier. ACS Biomater Sci Eng. 2026 Mar 03. Butkovich N, Xu Y, Song Y, Wang L, Ramirez A, Li E, Siao NTC, Velazquez-Rivera E, Xiang L, Xu X, Wang SW. PMID: 41773824.
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  2. Non-Canonical Subiculum Circuit Organization and Function. Hippocampus. 2026 Mar; 36(2):e70087. Gao P, Cao W, Nitz DA, Xu X. PMID: 41757742; PMCID: PMC12947615.
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  3. In vitro and in vivo characterization of a novel HSV-1 H129 neurotracer recombinant reveals dose-dependent replication and spread dynamics. J Virol. 2026 Feb 17; 100(2):e0202125. Nua T, Velazquez-Rivera E, Sayin I, Ogu JC, Wu M, Xu X, Koyuncu OO. PMID: 41504444; PMCID: PMC12911908.
    View in: PubMed Mentions: Fields:
    Translation:AnimalsCells
  4. Spatial transcriptomics in epilepsy research: Early successes, opportunities, and challenges. Epilepsia. 2026 Jan 03. Phillips DJ, Ivy AS, Guzman S, Hazany S, Xu X. PMID: 41483454.
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  5. Meeting report for the 2025 UC Irvine Center for Neural Circuit Mapping conference: The Changing Brain. Mol Psychiatry. 2026 Feb; 31(2):1173-1176. Alshami J, Holmes TC, Xu X. PMID: 41444403; PMCID: PMC12815669.
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    Translation:HumansAnimals
  6. Correction: BDNF augmentation reverses cranial radiation therapy-induced cognitive decline and neurodegenerative consequences. Acta Neuropathol Commun. 2025 Nov 10; 13(1):229. El-Khatib SM, Vagadia AR, Le ACD, Baulch JE, Ng DQ, Du M, Johnston KG, Tan Z, Xu X, Chan A, Acharya MM. PMID: 41214750; PMCID: PMC12599064.
    View in: PubMed Mentions: Fields:
  7. Hippocampal neural circuit mechanisms in Alzheimer's disease revealed by viral-genetic circuit mapping. Neurobiol Dis. 2025 Nov; 216:107139. Ye Q, Gast G, Holmes TC, Xu X. PMID: 41082949; PMCID: PMC12908724.
    View in: PubMed Mentions: Fields:
    Translation:HumansAnimalsCells
  8. Octodon degus: a natural animal model of aging and Alzheimer's disease. Lab Anim (NY). 2025 Sep; 54(9):219-222. Hurley MJ, Garduño BM, Deacon RMJ, Holmes TC, Xu X, Cogram P. PMID: 40855196; PMCID: PMC12404985.
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  9. Aggrecan protects against plaque accumulation and is essential for proper microglial responses to plaques. Cell Rep. 2025 Aug 26; 44(8):116064. Barahona RA, Kwang NE, Kono-Soosaipillai AR, Rubio Salgado G, Tran KM, Lu YH, Reddy S, da Cunha C, Velazquez-Rivera E, Crapser JD, Xu X, Hohsfield LA, Green KN. PMID: 40748756; PMCID: PMC12445281.
    View in: PubMed Mentions: Fields:
    Translation:HumansAnimalsCells
  10. Identification of the velum interpositum as a meningeal-CNS route for myeloid cell trafficking into the brain. Neuron. 2025 Aug 06; 113(15):2455-2473.e6. Hohsfield LA, Kim SJ, Barahona RA, Henningfield CM, Mansour K, Vallejo KD, Tsourmas KI, Kwang NE, Ghorbanian Y, Angulo JAA, Gao P, Pachow C, Inlay MA, Walsh CM, Xu X, Lane TE, Green KN. PMID: 40466634; PMCID: PMC12331438.
    View in: PubMed Mentions: 1 Fields:
    Translation:AnimalsCells
  11. Unfolding neural diversity: how dynamic three-dimensional genome architecture regulates brain function and disease. Mol Psychiatry. 2025 Aug; 30(8):3781-3791. Logeman BL, Grieco SF, Holmes TC, Xu X. PMID: 40410418; PMCID: PMC12228417.
    View in: PubMed Mentions: Fields:
    Translation:HumansAnimalsCells
  12. Specific targeting of brain endothelial cells using enhancer AAV vectors. Neuron. 2025 May 21; 113(10):1562-1578.e6. Velazquez-Rivera E, Dey O, Kim NS, Cao W, Ye Q, Gao P, Thai A, Nguyen JK, Zhang H, Ting JT, Gopi M, Ren B, Holmes TC, Xu X. PMID: 40403707; PMCID: PMC12117388.
    View in: PubMed Mentions: 1 Fields:
    Translation:HumansAnimalsCells
  13. An AAV capsid proposed as microglia-targeting directs genetic expression in forebrain excitatory neurons. Cell Rep Methods. 2025 Jun 16; 5(6):101054. Cao W, Tan Z, Berackey BT, Nguyen JK, Brown SR, Du S, Lin B, Ye Q, Seiler M, Holmes TC, Xu X. PMID: 40403726; PMCID: PMC12272241.
    View in: PubMed Mentions: Fields:
    Translation:AnimalsCells
  14. Editorial: Structure, function and development of neural circuits. Front Neural Circuits. 2025; 19:1573101. Xu X. PMID: 40134945; PMCID: PMC11932978.
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  15. Meeting report for the 2024 UC Irvine Center for neural circuit mapping conference: Brain cell types, circuits, and disorders. Mol Psychiatry. 2025 Mar; 30(3):1256-1258. Grieco SF, Holmes TC, Xu X. PMID: 39384964.
    View in: PubMed Mentions: 1 Fields:
    Translation:HumansAnimalsCells
  16. Spatial profiling of the interplay between cell type- and vision-dependent transcriptomic programs in the visual cortex. Proc Natl Acad Sci U S A. 2025 Feb 18; 122(7):e2421022122. Xie F, Jain S, Xu R, Butrus S, Tan Z, Xu X, Shekhar K, Zipursky SL. PMID: 39946537; PMCID: PMC11848306.
    View in: PubMed Mentions: 3 Fields:
    Translation:AnimalsCells
  17. Octodon degus laboratory colony management principles and methods for behavioral analysis for Alzheimer's disease neuroscience research. Front Aging Neurosci. 2024; 16:1517416. Garduño BM, Holmes TC, Deacon RMJ, Xu X, Cogram P. PMID: 39902280; PMCID: PMC11788410.
    View in: PubMed Mentions: 2
  18. RegBoost: Enhancing mouse brain image registration using geometric priors and Laplacian interpolation. Neuroimage. 2025 Jan; 305:120981. Chilaparasetti AN, Thai A, Gao P, Xu X, Gopi M. PMID: 39732220; PMCID: PMC12066957.
    View in: PubMed Mentions: 1 Fields:
    Translation:Animals
  19. BDNF augmentation reverses cranial radiation therapy-induced cognitive decline and neurodegenerative consequences. Acta Neuropathol Commun. 2024 12 18; 12(1):190. El-Khatib SM, Vagadia AR, Le ACD, Baulch JE, Ng DQ, Du M, Johnston KG, Tan Z, Xu X, Chan A, Acharya MM. PMID: 39696694; PMCID: PMC11654382.
    View in: PubMed Mentions: 6 Fields:
    Translation:Animals
  20. Projection-specific circuits of retrosplenial cortex with differential contributions to spatial cognition. Mol Psychiatry. 2025 May; 30(5):2068-2084. Lin X, Ghafuri A, Chen X, Kazmi M, Nitz DA, Xu X. PMID: 39511453; PMCID: PMC12014379.
    View in: PubMed Mentions: 2 Fields:
    Translation:AnimalsCells
  21. TIME-VARYING ℓ0 OPTIMIZATION FOR SPIKE INFERENCE FROM MULTI-TRIAL CALCIUM RECORDINGS. Data Sci Sci. 2024; 3(1). Shen T, DU M, Johnston K, Lur G, Xu X, Ombao H, Guindani M, Yu Z. PMID: 40756963; PMCID: PMC12316062.
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  22. Afferent and Efferent Connections of the Postinspiratory Complex (PiCo) Revealed by AAV and Monosynaptic Rabies Viral Tracing. J Comp Neurol. 2024 Nov; 532(11):e25683. Oliveira LM, Huff A, Wei A, Miranda NC, Wu G, Xu X, Ramirez JM. PMID: 39494735; PMCID: PMC12142889.
    View in: PubMed Mentions: 5 Fields:
    Translation:AnimalsCells
  23. Distinct dynamics and intrinsic properties in ventral tegmental area populations mediate reward association and motivation. Cell Rep. 2024 09 24; 43(9):114668. Elum JE, Szelenyi ER, Juarez B, Murry AD, Loginov G, Zamorano CA, Gao P, Wu G, Ng-Evans S, Yee JX, Xu X, Golden SA, Zweifel LS. PMID: 39207900; PMCID: PMC11514737.
    View in: PubMed Mentions: 9 Fields:
    Translation:AnimalsCells
  24. Small data methods in omics: the power of one. Nat Methods. 2024 Sep; 21(9):1597-1602. Johnston KG, Grieco SF, Nie Q, Theis FJ, Xu X. PMID: 39174710; PMCID: PMC12067744.
    View in: PubMed Mentions: 6 Fields:
    Translation:HumansAnimals
  25. Miniaturized Head-Mount Doppler Optical Coherence Tomography Scope for Freely Moving Mouse. ACS Photonics. 2024 Aug 21; 11(8):3381-3389. Wang J, Ye Q, Chou L, Qiu S, Xu X, Chen Z. PMID: 39184188; PMCID: PMC11342407.
    View in: PubMed Mentions: 3
  26. Single-cell spatial transcriptomics reveals distinct patterns of dysregulation in non-neuronal and neuronal cells induced by the Trem2R47H Alzheimer's risk gene mutation. Mol Psychiatry. 2025 Feb; 30(2):461-477. Johnston KG, Berackey BT, Tran KM, Gelber A, Yu Z, MacGregor GR, Mukamel EA, Tan Z, Green KN, Xu X. PMID: 39103533; PMCID: PMC11746152.
    View in: PubMed Mentions: 18 Fields:
    Translation:HumansAnimalsCells
  27. Brain image data processing using collaborative data workflows on Texera. Front Neural Circuits. 2024; 18:1398884. Ding Y, Huang Y, Gao P, Thai A, Chilaparasetti AN, Gopi M, Xu X, Li C. PMID: 39050044; PMCID: PMC11266044.
    View in: PubMed Mentions: Fields:
    Translation:Animals
  28. Single-cell spatial transcriptomics reveals a dystrophic trajectory following a developmental bifurcation of myoblast cell fates in facioscapulohumeral muscular dystrophy. Genome Res. 2024 06 25; 34(5):665-679. Chen L, Kong X, Johnston KG, Mortazavi A, Holmes TC, Tan Z, Yokomori K, Xu X. PMID: 38777608; PMCID: PMC11216401.
    View in: PubMed Mentions: 5 Fields:
    Translation:HumansCells
  29. ULV: A robust statistical method for clustered data, with applications to multi-subject, single-cell omics data. ArXiv. 2024 Jun 10. Du M, Johnston K, Berrocal V, Li W, Xu X, Yu Z. PMID: 38947924; PMCID: PMC11213121.
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  30. Massively parallel in vivo Perturb-seq reveals cell-type-specific transcriptional networks in cortical development. Cell. 2024 Jun 20; 187(13):3236-3248.e21. Zheng X, Wu B, Liu Y, Simmons SK, Kim K, Clarke GS, Ashiq A, Park J, Li J, Wang Z, Tong L, Wang Q, Rajamani KT, Muñoz-Castañeda R, Mu S, Qi T, Zhang Y, Ngiam ZC, Ohte N, Hanashima C, Wu Z, Xu X, Levin JZ, Jin X. PMID: 38772369; PMCID: PMC11193654.
    View in: PubMed Mentions: 24 Fields:
    Translation:HumansAnimalsCells
  31. Monosynaptic Rabies Tracing Reveals Sex- and Age-Dependent Dorsal Subiculum Connectivity Alterations in an Alzheimer's Disease Mouse Model. J Neurosci. 2024 04 17; 44(16). Ye Q, Gast G, Wilfley EG, Huynh H, Hays C, Holmes TC, Xu X. PMID: 38503494; PMCID: PMC11026364.
    View in: PubMed Mentions: 5 Fields:
    Translation:AnimalsCells
  32. Immunolabeling-compatible PEGASOS tissue clearing for high-resolution whole mouse brain imaging. Front Neural Circuits. 2024; 18:1345692. Gao P, Rivera M, Lin X, Holmes TC, Zhao H, Xu X. PMID: 38694272; PMCID: PMC11061518.
    View in: PubMed Mentions: 4 Fields:
    Translation:Animals
  33. Multichannel bridges and NSC synergize to enhance axon regeneration, myelination, synaptic reconnection, and recovery after SCI. NPJ Regen Med. 2024 Mar 18; 9(1):12. Nekanti U, Sakthivel PS, Zahedi A, Creasman DA, Nishi RA, Dumont CM, Piltti KM, Guardamondo GL, Hernandez N, Chen X, Song H, Lin X, Martinez J, On L, Lakatos A, Pawar K, David BT, Guo Z, Seidlits SK, Xu X, Shea LD, Cummings BJ, Anderson AJ. PMID: 38499577; PMCID: PMC10948859.
    View in: PubMed Mentions: 2
  34. Subicular neurons encode concave and convex geometries. Nature. 2024 Mar; 627(8005):821-829. Sun Y, Nitz DA, Xu X, Giocomo LM. PMID: 38448584; PMCID: PMC10972755.
    View in: PubMed Mentions: 8 Fields:
    Translation:AnimalsCells
  35. How the forebrain transitions to adulthood: developmental plasticity markers in a long-lived rodent reveal region diversity and the uniqueness of adolescence. Front Neurosci. 2024; 18:1365737. Garduño BM, Hanni P, Hays C, Cogram P, Insel N, Xu X. PMID: 38456144; PMCID: PMC10917993.
    View in: PubMed Mentions: 1
  36. New rabies viral resources for multi-scale neural circuit mapping. Mol Psychiatry. 2024 Jul; 29(7):1951-1967. Bouin A, Wu G, Koyuncu OO, Ye Q, Kim KY, Wu MY, Tong L, Chen L, Phan S, Mackey MR, Ramachandra R, Ellisman MH, Holmes TC, Semler BL, Xu X. PMID: 38355784; PMCID: PMC11322437.
    View in: PubMed Mentions: 5 Fields:
    Translation:HumansAnimalsCells
  37. Intranasal Delivery of Ketamine Induces Cortical Disinhibition. eNeuro. 2024 Jan; 11(1). Qiao X, Grieco SF, Yu Z, Holmes TC, Xu X. PMID: 38164560; PMCID: PMC10849039.
    View in: PubMed Mentions: Fields:
    Translation:AnimalsCells
  38. Meeting report for the 2023 UC Irvine Center for Neural Circuit Mapping Conference: structure, function and development of neural circuits. Mol Psychiatry. 2024 01; 29(1):121-123. Grieco SF, Holmes TC, Xu X. PMID: 37919404; PMCID: PMC11089064.
    View in: PubMed Mentions: 2 Fields:
    Translation:HumansAnimals
  39. Single cell spatial transcriptomics reveals distinct patterns of dysregulation in non-neuronal and neuronal cells induced by the Trem2R47H Alzheimer's risk gene mutation. Res Sq. 2023 Dec 07. Johnston K, Berackey BB, Tran KM, Gelber A, Yu Z, MacGregor G, Mukamel EA, Tan Z, Green K, Xu X. PMID: 38106071; PMCID: PMC10723554.
    View in: PubMed Mentions:
  40. Erythrocyte-brain endothelial interactions induce microglial responses and cerebral microhemorrhages in vivo. J Neuroinflammation. 2023 Nov 15; 20(1):265. Zhang H, Sumbria RK, Chang R, Sun J, Cribbs DH, Holmes TC, Fisher MJ, Xu X. PMID: 37968737; PMCID: PMC10647121.
    View in: PubMed Mentions: 11 Fields:
    Translation:AnimalsCells
  41. Multichannel bridges and NSC synergize to enhance axon regeneration, myelination, synaptic reconnection, and recovery after SCI. Res Sq. 2023 Jul 19. Nekanti U, Sakthivel P, Zahedi A, Creasman DA, Nishi RA, Dumont CM, Piltti KM, Guardamondo GL, Hernandez N, Chen X, Song H, Lin X, Martinez J, On L, Lakatos A, Pawar K, David BT, Guo Z, Seidlits SK, Xu X, Shea LD, Cummings BJ, Anderson AJ. PMID: 37502943; PMCID: PMC10371146.
    View in: PubMed Mentions:
  42. Anatomical and molecular characterization of parvalbumin-cholecystokinin co-expressing inhibitory interneurons: implications for neuropsychiatric conditions. Mol Psychiatry. 2023 12; 28(12):5293-5308. Grieco SF, Johnston KG, Gao P, Garduño BM, Tang B, Yi E, Sun Y, Horwitz GD, Yu Z, Holmes TC, Xu X. PMID: 37443194; PMCID: PMC11041731.
    View in: PubMed Mentions: 10 Fields:
    Translation:HumansAnimalsCells
  43. Hippocampal CA3 inhibitory neurons receive extensive noncanonical synaptic inputs from CA1 and subicular complex. J Comp Neurol. 2023 09; 531(13):1333-1347. Lin X, Cyrus N, Avila B, Holmes TC, Xu X. PMID: 37312626; PMCID: PMC10525020.
    View in: PubMed Mentions: 3 Fields:
    Translation:Cells
  44. Anatomical organization of temporally correlated neural calcium activity in the hippocampal CA1 region. iScience. 2023 May 19; 26(5):106703. Chen L, Lin X, Ye Q, Nenadic Z, Holmes TC, Nitz DA, Xu X. PMID: 37250317; PMCID: PMC10214731.
    View in: PubMed Mentions: 1
  45. Obtaining brain tissue from living patients for psychiatry research: collaboration with patients with epilepsy and neurosurgeons. Lancet Psychiatry. 2023 06; 10(6):381. Paff M, Grieco SF, Xu X. PMID: 37088087.
    View in: PubMed Mentions: Fields:
    Translation:Humans
  46. Probing neural circuit mechanisms in Alzheimer's disease using novel technologies. Mol Psychiatry. 2023 10; 28(10):4407-4420. Grieco SF, Holmes TC, Xu X. PMID: 36959497; PMCID: PMC10827671.
    View in: PubMed Mentions: 14 Fields:
    Translation:HumansAnimalsCells
  47. Inferring neuron-neuron communications from single-cell transcriptomics through NeuronChat. Nat Commun. 2023 02 28; 14(1):1128. Zhao W, Johnston KG, Ren H, Xu X, Nie Q. PMID: 36854676; PMCID: PMC9974942.
    View in: PubMed Mentions: 41 Fields:
    Translation:HumansAnimalsCells
  48. Stress-induced plasticity of a CRH/GABA projection disrupts reward behaviors in mice. Nat Commun. 2023 02 25; 14(1):1088. Birnie MT, Short AK, de Carvalho GB, Taniguchi L, Gunn BG, Pham AL, Itoga CA, Xu X, Chen LY, Mahler SV, Chen Y, Baram TZ. PMID: 36841826; PMCID: PMC9968307.
    View in: PubMed Mentions: 34 Fields:
    Translation:Animals
  49. Whole-brain input mapping of the lateral versus medial anterodorsal bed nucleus of the stria terminalis in the mouse. Neurobiol Stress. 2023 Mar; 23:100527. Sun Y, Zweifel LS, Holmes TC, Xu X. PMID: 36861029; PMCID: PMC9969273.
    View in: PubMed Mentions: 5
  50. Inferring neuron-neuron communications from single-cell transcriptomics through NeuronChat. bioRxiv. 2023 Jan 16. Zhao W, Johnston KG, Ren H, Xu X, Nie Q. PMID: 36712056; PMCID: PMC9882151.
    View in: PubMed Mentions:
  51. Meeting report for the 2022 UC Irvine Center for neural circuit mapping conference: linking brain function to cell types and circuits. Mol Psychiatry. 2023 01; 28(1):2-3. Grieco SF, Holmes TC, Xu X. PMID: 36198768.
    View in: PubMed Mentions: 2 Fields:
  52. Cognitively impaired aged Octodon degus recapitulate major neuropathological features of sporadic Alzheimer's disease. Acta Neuropathol Commun. 2022 12 19; 10(1):182. Tan Z, Garduño BM, Aburto PF, Chen L, Ha N, Cogram P, Holmes TC, Xu X. PMID: 36529803; PMCID: PMC9761982.
    View in: PubMed Mentions: 13 Fields:
    Translation:HumansAnimals
  53. Degenerate mapping of environmental location presages deficits in object-location encoding and memory in the 5xFAD mouse model for Alzheimer's disease. Neurobiol Dis. 2023 01; 176:105939. Zhang H, Chen L, Johnston KG, Crapser J, Green KN, Ha NM, Tenner AJ, Holmes TC, Nitz DA, Xu X. PMID: 36462718; PMCID: PMC10187684.
    View in: PubMed Mentions: 11 Fields:
    Translation:AnimalsCells
  54. Development of highly sensitive, flexible dual L-glutamate and GABA microsensors for in vivo brain sensing. Biosens Bioelectron. 2023 Feb 15; 222:114941. Chu SS, Nguyen HA, Lin D, Bhatti M, Jones-Tinsley CE, Do AH, Frostig RD, Nenadic Z, Xu X, Lim MM, Cao H. PMID: 36455372.
    View in: PubMed Mentions: 5 Fields:
    Translation:Animals
  55. Psychedelics and Neural Plasticity: Therapeutic Implications. J Neurosci. 2022 11 09; 42(45):8439-8449. Grieco SF, Castrén E, Knudsen GM, Kwan AC, Olson DE, Zuo Y, Holmes TC, Xu X. PMID: 36351821; PMCID: PMC9665925.
    View in: PubMed Mentions: 28 Fields:
    Translation:Humans
  56. Hippocampal neural circuit connectivity alterations in an Alzheimer's disease mouse model revealed by monosynaptic rabies virus tracing. Neurobiol Dis. 2022 10 01; 172:105820. Ye Q, Gast G, Su X, Saito T, Saido TC, Holmes TC, Xu X. PMID: 35843448; PMCID: PMC9482455.
    View in: PubMed Mentions: 15 Fields:
    Translation:HumansAnimalsCells
  57. Evidence of brain-derived neurotrophic factor in ameliorating cancer-related cognitive impairment: A systematic review of human studies. Crit Rev Oncol Hematol. 2022 Aug; 176:103748. Ng DQ, Chan D, Agrawal P, Zhao W, Xu X, Acharya M, Chan A. PMID: 35718064; PMCID: PMC12678231.
    View in: PubMed Mentions: 10 Fields:
    Translation:Humans
  58. Tracking longitudinal population dynamics of single neuronal calcium signal using SCOUT. Cell Rep Methods. 2022 05 23; 2(5):100207. Johnston KG, Grieco SF, Zhang H, Jin S, Xu X, Nie Q. PMID: 35637911; PMCID: PMC9142684.
    View in: PubMed Mentions: 5 Fields:
    Translation:Cells
  59. Longitudinal dynamics of microvascular recovery after acquired cortical injury. Acta Neuropathol Commun. 2022 04 25; 10(1):59. Lin X, Chen L, Jullienne A, Zhang H, Salehi A, Hamer M, C Holmes T, Obenaus A, Xu X. PMID: 35468870; PMCID: PMC9036719.
    View in: PubMed Mentions: 7 Fields:
    Translation:HumansAnimals
  60. Noncanonical projections to the hippocampal CA3 regulate spatial learning and memory by modulating the feedforward hippocampal trisynaptic pathway. PLoS Biol. 2021 12; 19(12):e3001127. Lin X, Amalraj M, Blanton C, Avila B, Holmes TC, Nitz DA, Xu X. PMID: 34928938; PMCID: PMC8741299.
    View in: PubMed Mentions: 26 Fields:
    Translation:Animals
  61. To deconvolve, or not to deconvolve: Inferences of neuronal activities using calcium imaging data. J Neurosci Methods. 2022 Jan 15; 366:109431. Shen T, Lur G, Xu X, Yu Z. PMID: 34856319; PMCID: PMC9482453.
    View in: PubMed Mentions: 2 Fields:
    Translation:Cells
  62. Spatial coding defects of hippocampal neural ensemble calcium activities in the triple-transgenic Alzheimer's disease mouse model. Neurobiol Dis. 2022 01; 162:105562. Lin X, Chen L, Baglietto-Vargas D, Kamalipour P, Ye Q, LaFerla FM, Nitz DA, Holmes TC, Xu X. PMID: 34838667; PMCID: PMC9482454.
    View in: PubMed Mentions: 14 Fields:
    Translation:Animals
  63. Beyond t test and ANOVA: applications of mixed-effects models for more rigorous statistical analysis in neuroscience research. Neuron. 2022 01 05; 110(1):21-35. Yu Z, Guindani M, Grieco SF, Chen L, Holmes TC, Xu X. PMID: 34784504; PMCID: PMC8763600.
    View in: PubMed Mentions: 208 Fields:
  64. Neuregulin signaling mediates the acute and sustained antidepressant effects of subanesthetic ketamine. Transl Psychiatry. 2021 02 24; 11(1):144. Grieco SF, Qiao X, Johnston KG, Chen L, Nelson RR, Lai C, Holmes TC, Xu X. PMID: 33627623; PMCID: PMC7904825.
    View in: PubMed Mentions: 14 Fields:
    Translation:HumansAnimals
  65. Host interneurons mediate plasticity reactivated by embryonic inhibitory cell transplantation in mouse visual cortex. Nat Commun. 2021 02 08; 12(1):862. Zheng X, Salinas KJ, Velez DXF, Nakayama T, Lin X, Banerjee D, Xu X, Gandhi SP. PMID: 33558487; PMCID: PMC7870960.
    View in: PubMed Mentions: 9 Fields:
    Translation:AnimalsCells
  66. Microglia Elimination Increases Neural Circuit Connectivity and Activity in Adult Mouse Cortex. J Neurosci. 2021 02 10; 41(6):1274-1287. Liu YJ, Spangenberg EE, Tang B, Holmes TC, Green KN, Xu X. PMID: 33380470; PMCID: PMC7888230.
    View in: PubMed Mentions: 86 Fields:
    Translation:AnimalsCells
  67. Subanesthetic Ketamine Reactivates Adult Cortical Plasticity to Restore Vision from Amblyopia. Curr Biol. 2020 09 21; 30(18):3591-3603.e8. Grieco SF, Qiao X, Zheng X, Liu Y, Chen L, Zhang H, Yu Z, Gavornik JP, Lai C, Gandhi SP, Holmes TC, Xu X. PMID: 32822611; PMCID: PMC7925140.
    View in: PubMed Mentions: 33 Fields:
    Translation:AnimalsCells
  68. Viral Vectors for Neural Circuit Mapping and Recent Advances in Trans-synaptic Anterograde Tracers. Neuron. 2020 09 23; 107(6):1029-1047. Xu X, Holmes TC, Luo MH, Beier KT, Horwitz GD, Zhao F, Zeng W, Hui M, Semler BL, Sandri-Goldin RM. PMID: 32755550; PMCID: PMC7530073.
    View in: PubMed Mentions: 60 Fields:
    Translation:HumansAnimalsCells
  69. Fos-CreER-based genetic mapping of forebrain regions activated by acupuncture. J Comp Neurol. 2020 04; 528(6):953-971. Guo Z, Lin X, Samaniego T, Isreb A, Cao S, Malik S, Holmes TC, Xu X. PMID: 31600836; PMCID: PMC7774513.
    View in: PubMed Mentions: 4 Fields:
    Translation:Animals
  70. Functional Reorganization of Local Circuit Connectivity in Superficial Spinal Dorsal Horn with Neuropathic Pain States. eNeuro. 2019 Sep/Oct; 6(5). Gong N, Hagopian G, Holmes TC, Luo ZD, Xu X. PMID: 31533959; PMCID: PMC6787342.
    View in: PubMed Mentions: 5 Fields:
    Translation:Animals
  71. CA1-projecting subiculum neurons facilitate object-place learning. Nat Neurosci. 2019 11; 22(11):1857-1870. Sun Y, Jin S, Lin X, Chen L, Qiao X, Jiang L, Zhou P, Johnston KG, Golshani P, Nie Q, Holmes TC, Nitz DA, Xu X. PMID: 31548723; PMCID: PMC6819262.
    View in: PubMed Mentions: 59 Fields:
    Translation:AnimalsCells
  72. Neuregulin and ErbB expression is regulated by development and sensory experience in mouse visual cortex. J Comp Neurol. 2020 02 15; 528(3):419-432. Grieco SF, Wang G, Mahapatra A, Lai C, Holmes TC, Xu X. PMID: 31454079; PMCID: PMC6901715.
    View in: PubMed Mentions: 10 Fields:
    Translation:AnimalsCells
  73. New viral-genetic mapping uncovers an enrichment of corticotropin-releasing hormone-expressing neuronal inputs to the nucleus accumbens from stress-related brain regions. J Comp Neurol. 2019 10 15; 527(15):2474-2487. Itoga CA, Chen Y, Fateri C, Echeverry PA, Lai JM, Delgado J, Badhon S, Short A, Baram TZ, Xu X. PMID: 30861133; PMCID: PMC6688927.
    View in: PubMed Mentions: 38 Fields:
    Translation:AnimalsCells
  74. Development of Local Circuit Connections to Hilar Mossy Cells in the Mouse Dentate Gyrus. eNeuro. 2019 Mar-Apr; 6(2). Shi Y, Grieco SF, Holmes TC, Xu X. PMID: 30937358; PMCID: PMC6439204.
    View in: PubMed Mentions: 2 Fields:
    Translation:AnimalsCells
  75. Geometry processing of conventionally produced mouse brain slice images. J Neurosci Methods. 2018 08 01; 306:45-56. Agarwal N, Xu X, Gopi M. PMID: 29689283; PMCID: PMC6086593.
    View in: PubMed Mentions: 11 Fields:
    Translation:Animals
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  77. c-Fos mapping of brain regions activated by multi-modal and electric foot shock stress. Neurobiol Stress. 2018 Feb; 8:92-102. Lin X, Itoga CA, Taha S, Li MH, Chen R, Sami K, Berton F, Francesconi W, Xu X. PMID: 29560385; PMCID: PMC5857493.
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  79. Melanin concentrating hormone modulates oxytocin-mediated marble burying. Neuropharmacology. 2018 Jan; 128:22-32. Sanathara NM, Garau C, Alachkar A, Wang L, Wang Z, Nishimori K, Xu X, Civelli O. PMID: 28888943; PMCID: PMC5830107.
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  80. Local and Long-Range Circuit Connections to Hilar Mossy Cells in the Dentate Gyrus. eNeuro. 2017 Mar-Apr; 4(2). Sun Y, Grieco SF, Holmes TC, Xu X. PMID: 28451637; PMCID: PMC5396130.
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  82. Differential arousal regulation by prokineticin 2 signaling in the nocturnal mouse and the diurnal monkey. Mol Brain. 2016 08 18; 9(1):78. Zhou QY, Burton KJ, Neal ML, Qiao Y, Kanthasamy AG, Sun Y, Xu X, Ma Y, Li X. PMID: 27535380; PMCID: PMC4989352.
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  83. Noncanonical connections between the subiculum and hippocampal CA1. J Comp Neurol. 2016 12 01; 524(17):3666-3673. Xu X, Sun Y, Holmes TC, López AJ. PMID: 27150503; PMCID: PMC5050062.
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  84. High-resolution and cell-type-specific photostimulation mapping shows weak excitatory vs. strong inhibitory inputs in the bed nucleus of the stria terminalis. J Neurophysiol. 2016 06 01; 115(6):3204-16. Xu X, Ikrar T, Sun Y, Santos R, Holmes TC, Francesconi W, Berton F. PMID: 27052587; PMCID: PMC4946595.
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  85. Genetic cell targeting uncovers specific neuronal types and distinct subregions in the bed nucleus of the stria terminalis. J Comp Neurol. 2016 08 15; 524(12):2379-99. Nguyen AQ, Dela Cruz JA, Sun Y, Holmes TC, Xu X. PMID: 26718312; PMCID: PMC5359980.
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  86. Large-scale neural circuit mapping data analysis accelerated with the graphical processing unit (GPU). J Neurosci Methods. 2015 Jan 15; 239:1-10. Shi Y, Veidenbaum AV, Nicolau A, Xu X. PMID: 25277633; PMCID: PMC4268008.
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  87. Bidirectional global spontaneous network activity precedes the canonical unidirectional circuit organization in the developing hippocampus. J Comp Neurol. 2014 Jun 15; 522(9):2191-208. Shi Y, Ikrar T, Olivas ND, Xu X. PMID: 24357090; PMCID: PMC4293468.
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  88. Distinct physiological and developmental properties of hippocampal CA2 subfield revealed by using anti-Purkinje cell protein 4 (PCP4) immunostaining. J Comp Neurol. 2014 Apr 15; 522(6):1333-54. San Antonio A, Liban K, Ikrar T, Tsyganovskiy E, Xu X. PMID: 24166578; PMCID: PMC4001794.
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  89. Cell-type-specific circuit connectivity of hippocampal CA1 revealed through Cre-dependent rabies tracing. Cell Rep. 2014 Apr 10; 7(1):269-80. Sun Y, Nguyen AQ, Nguyen JP, Le L, Saur D, Choi J, Callaway EM, Xu X. PMID: 24656815; PMCID: PMC3998524.
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  90. Histamine inhibits the melanin-concentrating hormone system: implications for sleep and arousal. J Physiol. 2014 May 15; 592(10):2183-96. Parks GS, Olivas ND, Ikrar T, Sanathara NM, Wang L, Wang Z, Civelli O, Xu X. PMID: 24639485; PMCID: PMC4227902.
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  91. Adult neurogenesis modifies excitability of the dentate gyrus. Front Neural Circuits. 2013; 7:204. Ikrar T, Guo N, He K, Besnard A, Levinson S, Hill A, Lee HK, Hen R, Xu X, Sahay A. PMID: 24421758; PMCID: PMC3872742.
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  92. Optical stimulation and imaging of functional brain circuitry in a segmented laminar flow chamber. Lab Chip. 2013 Feb 21; 13(4):536-41. Ahrar S, Nguyen TV, Shi Y, Ikrar T, Xu X, Hui EE. PMID: 23044655; PMCID: PMC3554874.
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    Translation:Animals
  93. Cell-type specific inactivation of hippocampal CA1 disrupts location-dependent object recognition in the mouse. Learn Mem. 2013 Feb 15; 20(3):139-46. Haettig J, Sun Y, Wood MA, Xu X. PMID: 23418393; PMCID: PMC3578275.
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  94. Laminar circuit organization and response modulation in mouse visual cortex. Front Neural Circuits. 2012; 6:70. Olivas ND, Quintanar-Zilinskas V, Nenadic Z, Xu X. PMID: 23060751; PMCID: PMC3464489.
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  95. Cell-type specific regulation of cortical excitability through the allatostatin receptor system. Front Neural Circuits. 2012; 6:2. Ikrar T, Shi Y, Velasquez T, Goulding M, Xu X. PMID: 22319474; PMCID: PMC3262160.
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  96. Mapping inhibitory neuronal circuits by laser scanning photostimulation. J Vis Exp. 2011 Oct 06; (56). Ikrar T, Olivas ND, Shi Y, Xu X. PMID: 22006064; PMCID: PMC3227169.
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  97. Oligodendrocytes as regulators of neuronal networks during early postnatal development. PLoS One. 2011 May 12; 6(5):e19849. Doretto S, Malerba M, Ramos M, Ikrar T, Kinoshita C, De Mei C, Tirotta E, Xu X, Borrelli E. PMID: 21589880; PMCID: PMC3093406.
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    Translation:AnimalsCells
  98. Novel use of matched filtering for synaptic event detection and extraction. PLoS One. 2010 Nov 24; 5(11):e15517. Shi Y, Nenadic Z, Xu X. PMID: 21124805; PMCID: PMC2991367.
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    Translation:HumansAnimalsCells
  99. High precision and fast functional mapping of cortical circuitry through a novel combination of voltage sensitive dye imaging and laser scanning photostimulation. J Neurophysiol. 2010 Apr; 103(4):2301-12. Xu X, Olivas ND, Levi R, Ikrar T, Nenadic Z. PMID: 20130040; PMCID: PMC2853294.
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    Translation:Animals

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