Daniel Aharoni • UCLA Profiles (original) (raw)
- Open-source, high performance miniature 2-photon microscopy systems for freely behaving animals. Nat Commun. 2025 Aug 03; 16(1):7125. Madruga BA, Dorian CC, Yang L, Sehgal M, Silva AJ, Shtrahman M, Aharoni D, Golshani P. PMID: 40753159; PMCID: PMC12318034.
View in: PubMed Mentions: 2 Fields:
Translation:AnimalsCells - Simultaneous two-color imaging with a dual-channel miniscope in freely behaving mice. Sci Adv. 2025 Jul 04; 11(27):eadr6470. Dong Z, Feng Y, Diego K, Baggetta AM, Sweis BM, Pennington ZT, Lamsifer SI, Zaki Y, Sangiuliano F, Philipsberg PA, Morales-Rodriguez D, Kircher D, Slesinger P, Shuman T, Aharoni D, Cai DJ. PMID: 40601747; PMCID: PMC12219470.
View in: PubMed Mentions: Fields:
Translation:AnimalsCells - MiniXL: An open-source, large field-of-view epifluorescence miniscope enabling single-cell resolution and multi-region imaging in mice. Sci Adv. 2025 06 13; 11(24):eads4995. Zhao P, Guo C, Xie M, Chen L, Golshani P, Aharoni D. PMID: 40498840; PMCID: PMC12154187.
View in: PubMed Mentions: 1 Fields:
Translation:AnimalsCells - GRIN lens implantation strategies for in vivo calcium imaging using miniature microscopy. PLoS One. 2025; 20(5):e0323256. Zhao P, Aharoni D, Golshani P. PMID: 40354432; PMCID: PMC12068630.
View in: PubMed Mentions: 2 Fields:
Translation:Animals - MiniXL: An open-source, large field-of-view epifluorescence miniature microscope for mice capable of single-cell resolution and multi-brain region imaging. bioRxiv. 2024 Aug 19. Zhao P, Guo C, Xie M, Chen L, Golshani P, Aharoni D. PMID: 39229051; PMCID: PMC11370419.
View in: PubMed Mentions: 1 - Correlated signatures of social behavior in cerebellum and anterior cingulate cortex. Elife. 2024 Feb 12; 12. Hur SW, Safaryan K, Yang L, Blair HT, Masmanidis SC, Mathews PJ, Aharoni D, Golshani P. PMID: 38345922; PMCID: PMC10942583.
View in: PubMed Mentions: 7 Fields:
Translation:Animals - Correlated signatures of social behavior in cerebellum and anterior cingulate cortex. bioRxiv. 2023 Oct 14. Hur SW, Safaryan K, Yang L, Blair HT, Masmanidis SC, Mathews PJ, Aharoni D, Golshani P. PMID: 37066345; PMCID: PMC10104017.
View in: PubMed Mentions: - Accelerated social representational drift in the nucleus accumbens in a model of autism. bioRxiv. 2023 Aug 05. Zhao P, Chen X, Bellafard A, Murugesan A, Quan J, Aharoni D, Golshani P. PMID: 37577515; PMCID: PMC10418509.
View in: PubMed Mentions: 2 - Hippocampal place cell remapping occurs with memory storage of aversive experiences. Elife. 2023 07 19; 12. Blair GJ, Guo C, Wang S, Fanselow MS, Golshani P, Aharoni D, Blair HT. PMID: 37466236; PMCID: PMC10368421.
View in: PubMed Mentions: 8 Fields:
Translation:AnimalsCells - FPGA-Based In-Vivo Calcium Image Decoding for Closed-Loop Feedback Applications. IEEE Trans Biomed Circuits Syst. 2023 04; 17(2):169-179. Chen Z, Blair GJ, Cao C, Zhou J, Aharoni D, Golshani P, Blair HT, Cong J. PMID: 37071510; PMCID: PMC10414190.
View in: PubMed Mentions: 3 Fields:
Translation:Animals - Miniscope-LFOV: A large-field-of-view, single-cell-resolution, miniature microscope for wired and wire-free imaging of neural dynamics in freely behaving animals. Sci Adv. 2023 04 21; 9(16):eadg3918. Guo C, Blair GJ, Sehgal M, Sangiuliano Jimka FN, Bellafard A, Silva AJ, Golshani P, Basso MA, Blair HT, Aharoni D. PMID: 37083539; PMCID: PMC10121160.
View in: PubMed Mentions: 54 Fields:
Translation:AnimalsCells - A hardware system for real-time decoding of in vivo calcium imaging data. Elife. 2023 01 24; 12. Chen Z, Blair GJ, Guo C, Zhou J, Romero-Sosa JL, Izquierdo A, Golshani P, Cong J, Aharoni D, Blair HT. PMID: 36692269; PMCID: PMC9908073.
View in: PubMed Mentions: 4 Fields:
Translation:Animals - BehaviorDEPOT is a simple, flexible tool for automated behavioral detection based on markerless pose tracking. Elife. 2022 08 23; 11. Gabriel CJ, Zeidler Z, Jin B, Guo C, Goodpaster CM, Kashay AQ, Wu A, Delaney M, Cheung J, DiFazio LE, Sharpe MJ, Aharoni D, Wilke SA, DeNardo LA. PMID: 35997072; PMCID: PMC9398447.
View in: PubMed Mentions: 35 Fields:
Translation:Animals - Minian, an open-source miniscope analysis pipeline. Elife. 2022 06 01; 11. Dong Z, Mau W, Feng Y, Pennington ZT, Chen L, Zaki Y, Rajan K, Shuman T, Aharoni D, Cai DJ. PMID: 35642786; PMCID: PMC9205633.
View in: PubMed Mentions: 39 Fields:
Translation:Animals - Breakdown of spatial coding and interneuron synchronization in epileptic mice. Nat Neurosci. 2020 02; 23(2):229-238. Shuman T, Aharoni D, Cai DJ, Lee CR, Chavlis S, Page-Harley L, Vetere LM, Feng Y, Yang CY, Mollinedo-Gajate I, Chen L, Pennington ZT, Taxidis J, Flores SE, Cheng K, Javaherian M, Kaba CC, Rao N, La-Vu M, Pandi I, Shtrahman M, Bakhurin KI, Masmanidis SC, Khakh BS, Poirazi P, Silva AJ, Golshani P. PMID: 31907437; PMCID: PMC7259114.
View in: PubMed Mentions: 110 Fields:
Translation:AnimalsCells - Circuit Investigations With Open-Source Miniaturized Microscopes: Past, Present and Future. Front Cell Neurosci. 2019; 13:141. Aharoni D, Hoogland TM. PMID: 31024265; PMCID: PMC6461004.
View in: PubMed Mentions: 102 - All the light that we can see: a new era in miniaturized microscopy. Nat Methods. 2019 Jan; 16(1):11-13. Aharoni D, Khakh BS, Silva AJ, Golshani P. PMID: 30573833; PMCID: PMC8320687.
View in: PubMed Mentions: 77 Fields:
Translation:Animals - Author Correction: High-speed volumetric imaging of neuronal activity in freely moving rodents. Nat Methods. 2018 06; 15(6):469. Skocek O, Nöbauer T, Weilguny L, Traub FM, Xia CN, Molodtsov MI, Grama A, Yamagata M, Aharoni D, Cox DD, Golshani P, Vaziri A. PMID: 29786093.
View in: PubMed Mentions: 2 Fields: - High-speed volumetric imaging of neuronal activity in freely moving rodents. Nat Methods. 2018 06; 15(6):429-432. Skocek O, Nöbauer T, Weilguny L, Martínez Traub F, Xia CN, Molodtsov MI, Grama A, Yamagata M, Aharoni D, Cox DD, Golshani P, Vaziri A. PMID: 29736000; PMCID: PMC7990085.
View in: PubMed Mentions: 95 Fields:
Translation:AnimalsCells - A shared neural ensemble links distinct contextual memories encoded close in time. Nature. 2016 06 02; 534(7605):115-8. Cai DJ, Aharoni D, Shuman T, Shobe J, Biane J, Song W, Wei B, Veshkini M, La-Vu M, Lou J, Flores SE, Kim I, Sano Y, Zhou M, Baumgaertel K, Lavi A, Kamata M, Tuszynski M, Mayford M, Golshani P, Silva AJ. PMID: 27251287; PMCID: PMC5063500.
View in: PubMed Mentions: 489 Fields:
Translation:AnimalsCells - Multifocal fluorescence microscope for fast optical recordings of neuronal action potentials. Biophys J. 2015 Feb 03; 108(3):520-9. Shtrahman M, Aharoni DB, Hardy NF, Buonomano DV, Arisaka K, Otis TS. PMID: 25650920; PMCID: PMC4317551.
View in: PubMed Mentions: 1 Fields:
Translation:AnimalsCells - Multisensory control of multimodal behavior: do the legs know what the tongue is doing? PLoS One. 2013; 8(11):e80465. Cushman JD, Aharoni DB, Willers B, Ravassard P, Kees A, Vuong C, Popeney B, Arisaka K, Mehta MR. PMID: 24224054; PMCID: PMC3817119.
View in: PubMed Mentions: 21 Fields:
Translation:Animals - High-throughput single-molecule fluorescence spectroscopy using parallel detection. Proc SPIE Int Soc Opt Eng. 2010 Jan 24; 7608(76082D). Michalet X, Colyer RA, Scalia G, Kim T, Levi M, Aharoni D, Cheng A, Guerrieri F, Arisaka K, Millaud J, Rech I, Resnati D, Marangoni S, Gulinatti A, Ghioni M, Tisa S, Zappa F, Cova S, Weiss S. PMID: 21625288; PMCID: PMC3103226.
View in: PubMed Mentions: 9
This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.
This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.
Start with: newest oldestInclude: line numbers double spacing all authors publication IDs