Julie Law • UCSD Profiles (original) (raw)

  1. Transcription factors instruct DNA methylation patterns in plant reproductive tissues. Nat Cell Biol. 2025 Dec; 27(12):2116-2127. Xu G, Chen Y, Martins LM, Li E, Wang F, Magana T, Ruan J, Law JA. PMID: 41272308; PMCID: PMC12717013.
    View in: PubMed Mentions: 2 Fields:
    Translation:AnimalsCells
  2. Arabidopsis YEATS domain proteins facilitate DNA double strand break repair via homologous recombination pathways. bioRxiv. 2025 Oct 14. Vegesna N, Bourbousse C, Jami-Alahmadi Y, Palanca AMS, Wohlschlegel JA, Law JA. PMID: 41279451; PMCID: PMC12632776.
    View in: PubMed Mentions:
  3. In Utero Alcohol and Unsuitable Home Environmental Exposure Combined with FMR1 Full Mutation Allele Cause Severe Fragile X Syndrome Phenotypes. Int J Mol Sci. 2025 Mar 21; 26(7). Winarni TI, Aishworiya R, Culpepper H, Zafarullah M, Mendoza G, Wilaisakditipakorn TJ, Likhitweerawong N, Law J, Hagerman R, Tassone F. PMID: 40243429; PMCID: PMC11988866.
    View in: PubMed Mentions: Fields:
    Translation:HumansPHPublic Health
  4. Transcription factors instruct DNA methylation patterns in plant reproductive tissues. bioRxiv. 2025 Feb 23. Xu G, Chen Y, Wang F, Li E, Law JA. PMID: 40027821; PMCID: PMC11870629.
    View in: PubMed Mentions:
  5. Breakage fusion bridge cycles drive high oncogene number with moderate intratumoural heterogeneity. Nat Commun. 2025 Feb 10; 16(1):1497. Raeisi Dehkordi S, Wong IT, Ni J, Luebeck J, Zhu K, Prasad G, Krockenberger L, Xu G, Chowdhury B, Rajkumar U, Caplin A, Muliaditan D, Gnanasekar A, Coruh C, Jin Q, Turner K, Teo SX, Pang AWC, Alexandrov LB, Chua CEL, Furnari FB, Maciejowski J, Paulson TG, Law JA, Chang HY, Yue F, DasGupta R, Zhao J, Mischel PS, Bafna V. PMID: 39929823; PMCID: PMC11811125.
    View in: PubMed Mentions: 8 Fields:
    Translation:HumansAnimalsCells
  6. A single-nuclei transcriptome census of the Arabidopsis maturing root identifies that MYB67 controls phellem cell maturation. Dev Cell. 2025 05 05; 60(9):1377-1391.e7. Miller CN, Jarrell-Hurtado S, Haag MV, Sara Ye Y, Simenc M, Alvarez-Maldonado P, Behnami S, Zhang L, Swift J, Papikian A, Yu J, Colt K, Ecker JR, Michael TP, Law JA, Busch W. PMID: 39793584; PMCID: PMC12582553.
    View in: PubMed Mentions: 1 Fields:
    Translation:AnimalsCells
  7. CLSY docking to Pol IV requires a conserved domain critical for small RNA biogenesis and transposon silencing. Nat Commun. 2024 11 27; 15(1):10298. Felgines L, Rymen B, Martins LM, Xu G, Matteoli C, Himber C, Zhou M, Eis J, Coruh C, Böhrer M, Kuhn L, Chicher J, Pandey V, Hammann P, Wohlschlegel J, Waltz F, Law JA, Blevins T. PMID: 39604359; PMCID: PMC11603163.
    View in: PubMed Mentions: 6 Fields:
    Translation:AnimalsCells
  8. Loops, crosstalk, and compartmentalization: it takes many layers to regulate DNA methylation. Curr Opin Genet Dev. 2024 02; 84:102147. Xu G, Law JA. PMID: 38176333; PMCID: PMC10922829.
    View in: PubMed Mentions: 5 Fields:
    Translation:Cells
  9. CLSY docking to Pol IV requires a conserved domain critical for small RNA biogenesis and transposon silencing. bioRxiv. 2023 Dec 26. Felgines L, Rymen B, Martins LM, Xu G, Matteoli C, Himber C, Zhou M, Eis J, Coruh C, Böhrer M, Kuhn L, Chicher J, Pandey V, Hammann P, Wohlschlegel J, Waltz F, Law JA, Blevins T. PMID: 38234754; PMCID: PMC10793415.
    View in: PubMed Mentions:
  10. Breakage fusion bridge cycles drive high oncogene copy number, but not intratumoral genetic heterogeneity or rapid cancer genome change. bioRxiv. 2023 Dec 13. Dehkordi SR, Wong IT, Ni J, Luebeck J, Zhu K, Prasad G, Krockenberger L, Xu G, Chowdhury B, Rajkumar U, Caplin A, Muliaditan D, Coruh C, Jin Q, Turner K, Teo SX, Pang AWC, Alexandrov LB, Chua CEL, Furnari FB, Paulson TG, Law JA, Chang HY, Yue F, DasGupta R, Zhao J, Mischel PS, Bafna V. PMID: 38168210; PMCID: PMC10760206.
    View in: PubMed Mentions:
  11. Moving targets: Mechanisms regulating siRNA production and DNA methylation during plant development. Curr Opin Plant Biol. 2023 10; 75:102435. Martins LM, Law JA. PMID: 37598540; PMCID: PMC10581331.
    View in: PubMed Mentions: 12 Fields:
    Translation:Cells
  12. Therapy for insomnia with chronic obstructive pulmonary disease: a randomized trial of components. J Clin Sleep Med. 2022 12 01; 18(12):2763-2774. Kapella M, Steffen A, Prasad B, Laghi F, Vispute S, Kemner G, Teixeira C, Peters T, Jun J, Law J, Carley D. PMID: 35946416; PMCID: PMC9713922.
    View in: PubMed Mentions: 6 Fields:
    Translation:Humans
  13. Targeted profiling of human extrachromosomal DNA by CRISPR-CATCH. Nat Genet. 2022 11; 54(11):1746-1754. Hung KL, Luebeck J, Dehkordi SR, Colón CI, Li R, Wong IT, Coruh C, Dharanipragada P, Lomeli SH, Weiser NE, Moriceau G, Zhang X, Bailey C, Houlahan KE, Yang W, González RC, Swanton C, Curtis C, Jamal-Hanjani M, Henssen AG, Law JA, Greenleaf WJ, Lo RS, Mischel PS, Bafna V, Chang HY. PMID: 36253572; PMCID: PMC9649439.
    View in: PubMed Mentions: 73 Fields:
    Translation:Humans
  14. Chemoenzymatic labeling of DNA methylation patterns for single-molecule epigenetic mapping. Nucleic Acids Res. 2022 09 09; 50(16):e92. Gabrieli T, Michaeli Y, Avraham S, Torchinsky D, Margalit S, Schütz L, Juhasz M, Coruh C, Arbib N, Zhou ZS, Law JA, Weinhold E, Ebenstein Y. PMID: 35657088; PMCID: PMC9458417.
    View in: PubMed Mentions: 15 Fields:
    Translation:HumansAnimalsCells
  15. The CLASSY family controls tissue-specific DNA methylation patterns in Arabidopsis. Nat Commun. 2022 01 11; 13(1):244. Zhou M, Coruh C, Xu G, Martins LM, Bourbousse C, Lambolez A, Law JA. PMID: 35017514; PMCID: PMC8752594.
    View in: PubMed Mentions: 51 Fields:
    Translation:AnimalsCells
  16. AmpliconReconstructor integrates NGS and optical mapping to resolve the complex structures of focal amplifications. Nat Commun. 2020 09 01; 11(1):4374. Luebeck J, Coruh C, Dehkordi SR, Lange JT, Turner KM, Deshpande V, Pai DA, Zhang C, Rajkumar U, Law JA, Mischel PS, Bafna V. PMID: 32873787; PMCID: PMC7463033.
    View in: PubMed Mentions: 59 Fields:
    Translation:HumansCells
  17. Circular ecDNA promotes accessible chromatin and high oncogene expression. Nature. 2019 11; 575(7784):699-703. Wu S, Turner KM, Nguyen N, Raviram R, Erb M, Santini J, Luebeck J, Rajkumar U, Diao Y, Li B, Zhang W, Jameson N, Corces MR, Granja JM, Chen X, Coruh C, Abnousi A, Houston J, Ye Z, Hu R, Yu M, Kim H, Law JA, Verhaak RGW, Hu M, Furnari FB, Chang HY, Ren B, Bafna V, Mischel PS. PMID: 31748743; PMCID: PMC7094777.
    View in: PubMed Mentions: 339 Fields:
    Translation:HumansCells
  18. Directions for research and training in plant omics: Big Questions and Big Data. Plant Direct. 2019 Apr; 3(4):e00133. Argueso CT, Assmann SM, Birnbaum KD, Chen S, Dinneny JR, Doherty CJ, Eveland AL, Friesner J, Greenlee VR, Law JA, Marshall-Colón A, Mason GA, O'Lexy R, Peck SC, Schmitz RJ, Song L, Stern D, Varagona MJ, Walley JW, Williams CM. PMID: 31245771; PMCID: PMC6589541.
    View in: PubMed Mentions: 12
  19. SOG1 activator and MYB3R repressors regulate a complex DNA damage network in Arabidopsis. Proc Natl Acad Sci U S A. 2018 12 26; 115(52):E12453-E12462. Bourbousse C, Vegesna N, Law JA. PMID: 30541889; PMCID: PMC6310815.
    View in: PubMed Mentions: 78 Fields:
    Translation:AnimalsCells
  20. Locus-specific control of the de novo DNA methylation pathway in Arabidopsis by the CLASSY family. Nat Genet. 2018 06; 50(6):865-873. Zhou M, Palanca AMS, Law JA. PMID: 29736015; PMCID: PMC6317521.
    View in: PubMed Mentions: 80 Fields:
    Translation:AnimalsCells
  21. The MBD7 complex promotes expression of methylated transgenes without significantly altering their methylation status. Elife. 2017 04 28; 6. Li D, Palanca AMS, Won SY, Gao L, Feng Y, Vashisht AA, Liu L, Zhao Y, Liu X, Wu X, Li S, Le B, Kim YJ, Yang G, Li S, Liu J, Wohlschlegel JA, Guo H, Mo B, Chen X, Law JA. PMID: 28452714; PMCID: PMC5462541.
    View in: PubMed Mentions: 10 Fields:
    Translation:AnimalsCells
  22. RNA Pol IV and V in gene silencing: Rebel polymerases evolving away from Pol II's rules. Curr Opin Plant Biol. 2015 Oct; 27:154-64. Zhou M, Law JA. PMID: 26344361; PMCID: PMC4618083.
    View in: PubMed Mentions: 52 Fields:
    Translation:AnimalsCells
  23. Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1. Nature. 2013 Jun 20; 498(7454):385-9. Law JA, Du J, Hale CJ, Feng S, Krajewski K, Palanca AM, Strahl BD, Patel DJ, Jacobsen SE. PMID: 23636332; PMCID: PMC4119789.
    View in: PubMed Mentions: 210 Fields:
    Translation:AnimalsCells
  24. DDR complex facilitates global association of RNA polymerase V to promoters and evolutionarily young transposons. Nat Struct Mol Biol. 2012 Sep; 19(9):870-5. Zhong X, Hale CJ, Law JA, Johnson LM, Feng S, Tu A, Jacobsen SE. PMID: 22864289; PMCID: PMC3443314.
    View in: PubMed Mentions: 120 Fields:
    Translation:AnimalsCells
  25. Cognitive behavioral therapy for insomnia comorbid with COPD is feasible with preliminary evidence of positive sleep and fatigue effects. Int J Chron Obstruct Pulmon Dis. 2011; 6:625-35. Kapella MC, Herdegen JJ, Perlis ML, Shaver JL, Larson JL, Law JA, Carley DW. PMID: 22162648; PMCID: PMC3232169.
    View in: PubMed Mentions: 33 Fields:
    Translation:Humans
  26. SHH1, a homeodomain protein required for DNA methylation, as well as RDR2, RDM4, and chromatin remodeling factors, associate with RNA polymerase IV. PLoS Genet. 2011 Jul; 7(7):e1002195. Law JA, Vashisht AA, Wohlschlegel JA, Jacobsen SE. PMID: 21811420; PMCID: PMC3141008.
    View in: PubMed Mentions: 122 Fields:
    Translation:AnimalsCells
  27. Identification of genes required for de novo DNA methylation in Arabidopsis. Epigenetics. 2011 Mar; 6(3):344-54. Greenberg MV, Ausin I, Chan SW, Cokus SJ, Cuperus JT, Feng S, Law JA, Chu C, Pellegrini M, Carrington JC, Jacobsen SE. PMID: 21150311; PMCID: PMC3092683.
    View in: PubMed Mentions: 47 Fields:
    Translation:AnimalsCells
  28. A dual flip-out mechanism for 5mC recognition by the Arabidopsis SUVH5 SRA domain and its impact on DNA methylation and H3K9 dimethylation in vivo. Genes Dev. 2011 Jan 15; 25(2):137-52. Rajakumara E, Law JA, Simanshu DK, Voigt P, Johnson LM, Reinberg D, Patel DJ, Jacobsen SE. PMID: 21245167; PMCID: PMC3022260.
    View in: PubMed Mentions: 69 Fields:
    Translation:AnimalsCells
  29. SET DOMAIN GROUP2 is the major histone H3 lysine [corrected] 4 trimethyltransferase in Arabidopsis. Proc Natl Acad Sci U S A. 2010 Oct 26; 107(43):18557-62. Guo L, Yu Y, Law JA, Zhang X. PMID: 20937886; PMCID: PMC2972934.
    View in: PubMed Mentions: 72 Fields:
    Translation:AnimalsCells
  30. A protein complex required for polymerase V transcripts and RNA- directed DNA methylation in Arabidopsis. Curr Biol. 2010 May 25; 20(10):951-6. Law JA, Ausin I, Johnson LM, Vashisht AA, Zhu JK, Wohlschlegel JA, Jacobsen SE. PMID: 20409711; PMCID: PMC2972704.
    View in: PubMed Mentions: 120 Fields:
    Translation:AnimalsCells
  31. Establishing, maintaining and modifying DNA methylation patterns in plants and animals. Nat Rev Genet. 2010 Mar; 11(3):204-20. Law JA, Jacobsen SE. PMID: 20142834; PMCID: PMC3034103.
    View in: PubMed Mentions: 1803 Fields:
    Translation:AnimalsCells
  32. Molecular biology. Dynamic DNA methylation. Science. 2009 Mar 20; 323(5921):1568-9. Law JA, Jacobsen SE. PMID: 19299607.
    View in: PubMed Mentions: 17 Fields:
    Translation:AnimalsCells
  33. SRA-domain proteins required for DRM2-mediated de novo DNA methylation. PLoS Genet. 2008 Nov; 4(11):e1000280. Johnson LM, Law JA, Khattar A, Henderson IR, Jacobsen SE. PMID: 19043555; PMCID: PMC2582956.
    View in: PubMed Mentions: 90 Fields:
    Translation:AnimalsCells
  34. Trypanosoma brucei RNA editing protein TbMP42 (band VI) is crucial for the endonucleolytic cleavages but not the subsequent steps of U-deletion and U-insertion. RNA. 2008 Jun; 14(6):1187-200. Law JA, O'Hearn SF, Sollner-Webb B. PMID: 18441050; PMCID: PMC2390806.
    View in: PubMed Mentions: 17 Fields:
    Translation:AnimalsCells
  35. In Trypanosoma brucei RNA editing, TbMP18 (band VII) is critical for editosome integrity and for both insertional and deletional cleavages. Mol Cell Biol. 2007 Jan; 27(2):777-87. Law JA, O'Hearn S, Sollner-Webb B. PMID: 17101787; PMCID: PMC1800803.
    View in: PubMed Mentions: 17 Fields:
    Translation:AnimalsCells
  36. T. brucei RNA editing: action of the U-insertional TUTase within a U-deletion cycle. RNA. 2006 Mar; 12(3):476-87. Zhelonkina AG, O'Hearn SF, Law JA, Cruz-Reyes J, Huang CE, Alatortsev VS, Sollner-Webb B. PMID: 16495238; PMCID: PMC1383585.
    View in: PubMed Mentions: 6 Fields:
    Translation:AnimalsCells
  37. In Trypanosoma brucei RNA editing, band II enables recognition specifically at each step of the U insertion cycle. Mol Cell Biol. 2005 Apr; 25(7):2785-94. Law JA, Huang CE, O'Hearn SF, Sollner-Webb B. PMID: 15767682; PMCID: PMC1061641.
    View in: PubMed Mentions: 15 Fields:
    Translation:AnimalsCells

This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.

This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.

Start with: newest oldestInclude: line numbers double spacing all authors publication IDs