Everlyn Kamau • UCSF Profiles (original) (raw)

  1. Use of serology to assess the probability of public health action needed for trachoma in coastal Ecuador. medRxiv. 2026 Feb 19. Kamau E, Simbaña Vivanco L, Torres Ayala S, Walas N, Cooley G, Coleman C, Goodhew EB, Martin DL, Burroughs H, Calvopiña M, Cevallos W, Vivero S, Nipaz V, Coloma J, Lee GO, Trueba G, Eisenberg JNS, Levy K, Arnold BF. PMID: 41757217; PMCID: PMC12934857.
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  2. Integrated serosurveillance to assess disease elimination in coastal Ecuador: onchocerciasis, yaws, and trachoma. medRxiv. 2026 Feb 19. Simbaña Vivanco L, Torres Ayala S, Walas N, Cooley G, Coleman C, Goodhew EB, Martin DL, Burroughs H, Kamau E, Calvopiña M, Cevallos W, Coloma J, Lee GO, Trueba G, Eisenberg JNS, Levy K, Arnold BF. PMID: 41757197; PMCID: PMC12934873.
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  3. Effects of improved water, sanitation, handwashing and nutrition on early childhood IgG immune repertoire development against Shigella and enteroinvasive Escherichia coli (EIEC). medRxiv. 2025 Nov 22. Walas N, Kamau E, Zhang M, Kamath K, Reifert J, Shon J, Ali S, Rahman MZ, Shoab AK, Famida SL, Akther S, Hossen MS, Mutsuddi P, Rahman M, Mertens AN, Charles R, Leung D, Luby S, Lin A, Arnold BF. PMID: 41332872; PMCID: PMC12668103.
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  4. A framework for guiding integrated disease control measures through multipathogen surveillance. medRxiv. 2025 Nov 04. Bents SJ, Rerolle F, Ante-Testard PA, Kamau E, Rahman M, Ashraf S, Parvez SM, Haque R, Priest JW, Lammie PJ, Lin A, Benjamin-Chung J, Ercumen A, Luby SP, Lo NC, Arnold BF. PMID: 41282812; PMCID: PMC12637792.
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  5. Data Resource Profile: Global Trachoma Serology Data Repository. Int J Epidemiol. 2025 Oct 14; 54(6). Kamau E, Ante-Testard PA, Colado J, Nash SD, Martin DL, Arnold BF. PMID: 41208168; PMCID: PMC12597674.
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  6. Reconstructing pathogen-specific antibody binding epitopes and age-dependent immune signatures from proteomic-scale peptide libraries. medRxiv. 2025 Sep 22. Kamau E, Walas N, Zhang M, Kamath K, Reifert J, Shon J, Ali S, Rahman MZ, Shoab AK, Famida SL, Akther S, Hossen MS, Mutsuddi P, Rahman M, Mertens AN, Charles RC, Leung DT, Luby S, Lin A, Arnold BF. PMID: 41040718; PMCID: PMC12486044.
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  7. Design considerations for incorporating serological monitoring into trachoma prevalence surveys. medRxiv. 2025 Sep 07. Kamau E, Gass K, Harding-Esch EM, Saboyá Díaz MI, Ante-Testard PA, Kello AB, Bailey RL, Fornace K, Solomon AW, Nash SD, Arnold BF, Global Trachoma Serosurveillance Study Group. PMID: 40950426; PMCID: PMC12424889.
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  8. Using Model-Based Geostatistics to Refine Population-Based Estimates of Trachoma Prevalence: Update from a Technical Consultation. Am J Trop Med Hyg. 2025 Oct 01; 113(4):930-936. Harte A, Sasanami M, Burgert-Brucker CR, Bakhtiari A, Bisanzio D, Jimenez C, Solomon AW, Kabona GE, Masika MP, Ngondi J, Ante-Testard PA, Arnold BF, Baayenda G, Cuenca PR, Diggle PJ, Edirweera D, Emerson PM, Fronterre C, Gass K, Newbury L, Hooper PJ, Kamau E, Kebede F, Kyomuhangi I, Lietman TM, McCracken K, Minnery M, Nash SD, Nicholls T, Olobio N, Palmer SL, Saeedzai SA, Somerville S, Stern C, Stukel D, Szwarcwald CL, Talero SL, Yevstigneyeva V, Kello AB, Harding-Esch E, Giorgi E. PMID: 40744002; PMCID: PMC12493125.
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  9. Characterizing trachoma elimination using serology. Nat Commun. 2025 Jul 01; 16(1):5545. Kamau E, Ante-Testard PA, Gwyn S, Blumberg S, Abdalla Z, Aiemjoy K, Amza A, Aragie S, Arzika AM, Awoussi MS, Bailey RL, Butcher R, Callahan EK, Chaima D, Dawed AA, Díaz MIS, Domingo AS, Drakeley C, Elshafie BE, Emerson PM, Fornace K, Gass K, Goodhew EB, Hammou J, Harding-Esch EM, Hooper PJ, Kadri B, Kalua K, Kanyi S, Kasubi M, Kello AB, Ko R, Lammie PJ, Lescano AG, Maliki R, Masika MP, Migchelsen SJ, Nassirou B, Nesemann JM, Parameswaran N, Pomat W, Renneker KK, Roberts C, Rymil P, Sata E, Senyonjo L, Seife F, Sillah A, Sokana O, Srivathsan A, Tadesse Z, Taleo F, Taylor EM, Tekeraoi R, Togbey K, West SK, Wickens K, William T, Wittberg DM, Yeboah-Manu D, Youbi M, Zeru T, Keenan JD, Lietman TM, Solomon AW, Nash SD, Martin DL, Arnold BF. PMID: 40593530; PMCID: PMC12216694.
    View in: PubMed Mentions: 3 Fields:
    Translation:HumansCellsPHPublic Health
  10. The Mathematics of Serocatalytic Models With Applications to Public Health Data. Stat Med. 2025 Jul; 44(15-17):e70188. Kamau E, Chen J, Bajaj S, Torres N, Creswell R, Pavlich-Mariscal JA, Donnelly C, Cucunubá Z, Lambert B. PMID: 40696544; PMCID: PMC12284347.
    View in: PubMed Mentions: 1 Fields:
    Translation:HumansPHPublic Health
  11. Enterovirus A71 and coxsackievirus A6 circulation in England, UK, 2006-2017: A mathematical modelling study using cross-sectional seroprevalence data. PLoS Pathog. 2024 Nov; 20(11):e1012703. Kamau E, Lambert B, Allen DJ, Celma C, Beard S, Harvala H, Simmonds P, Grassly NC, Pons-Salort M. PMID: 39565769; PMCID: PMC11578500.
    View in: PubMed Mentions: 2 Fields:
    Translation:HumansCells
  12. Spatio-temporal distribution of rhinovirus types in Kenya: a retrospective analysis, 2014. Sci Rep. 2024 09 27; 14(1):22298. Morobe JM, Kamau E, Luka MM, Murunga N, Lewa C, Mutunga M, Bigogo G, Otieno N, Nyawanda B, Onyango C, Nokes DJ, Agoti CN, Munywoki PK. PMID: 39333386; PMCID: PMC11436855.
    View in: PubMed Mentions: 1 Fields:
    Translation:HumansCells
  13. Characterizing trachoma elimination using serology. medRxiv. 2024 Sep 24. Kamau E, Ante-Testard PA, Gwyn S, Blumberg S, Abdalla Z, Aiemjoy K, Amza A, Aragie S, Arzika AM, Awoussi MS, Bailey RL, Butcher R, Callahan EK, Chaima D, Dawed AA, Saboyá Díaz MI, Domingo AS, Drakeley C, Elshafie BE, Emerson PM, Fornace K, Gass K, Goodhew EB, Hammou J, Harding-Esch EM, Hooper PJ, Kadri B, Kalua K, Kanyi S, Kasubi M, Kello AB, Ko R, Lammie PJ, Lescano AG, Maliki R, Masika MP, Migchelsen SJ, Nassirou B, Nesemann JM, Parameswaran N, Pomat W, Renneker K, Roberts C, Rymil P, Sata E, Senyonjo L, Seife F, Sillah A, Sokana O, Srivathsan A, Tadesse Z, Taleo F, Taylor EM, Tekeraoi R, Togbey K, West SK, Wickens K, William T, Wittberg DM, Yeboah-Manu D, Youbi M, Zeru T, Keenan JD, Lietman TM, Solomon AW, Nash SD, Martin DL, Arnold BF. PMID: 39399026; PMCID: PMC11469394.
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  14. Assessment of twelve echovirus virus-neutralisation assays in Europe: recommendations for harmonisation of non-polio enterovirus sero-surveillance studies. J Gen Virol. 2024 09; 105(9). Couderé K, Benschop KSM, Koen G, van Eijk H, Harvala H, Bailly JL, Bessaud M, Kamau E, Simon I, Joffret ML, Nikolaeva-Glomb L, Georgieva I, Stoyanova A, Diedrich S, Böttcher S, Cabrerizo M, Tabain I, Hruškar Ž, Stevanovic V, Susi P, Hietanen E, Palminha P, Rainetová P, Baicus A, Kristensen M, Pajkrt D, Murk JL, Wolthers KC. PMID: 39311842.
    View in: PubMed Mentions: 1 Fields:
    Translation:HumansCells
  15. Rhinovirus dynamics across different social structures. Npj Viruses. 2023; 1(1):6. Luka MM, Otieno JR, Kamau E, Morobe JM, Murunga N, Adema I, Nyiro JU, Macharia PM, Bigogo G, Otieno NA, Nyawanda BO, Rabaa MA, Emukule GO, Onyango C, Munywoki PK, Agoti CN, Nokes DJ. PMID: 38665239; PMCID: PMC11041716.
    View in: PubMed Mentions: 2
  16. Estimating prevalence of Enterovirus D111 in human and non-human primate populations using cross-sectional serology. J Gen Virol. 2023 11; 104(11). Kamau E, Bessaud M, Majumdar M, Martin J, Simmonds P, Harvala H. PMID: 37910158; PMCID: PMC10768692.
    View in: PubMed Mentions: 3 Fields:
    Translation:HumansAnimalsCells
  17. Surveillance of respiratory viruses at health facilities from across Kenya, 2014. Wellcome Open Res. 2022; 7:234. Murunga N, Nyawanda B, Nyiro JU, Otieno GP, Kamau E, Agoti CN, Lewa C, Gichuki A, Mutunga M, Otieno N, Mayieka L, Ochieng M, Kikwai G, Hunsperger E, Onyango C, Emukule G, Bigogo G, Verani JR, Chaves SS, Nokes DJ, Munywoki PK. PMID: 41613249; PMCID: PMC12848351.
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  18. Changes in transmission of Enterovirus D68 (EV-D68) in England inferred from seroprevalence data. Elife. 2023 06 09; 12. Pons-Salort M, Lambert B, Kamau E, Pebody R, Harvala H, Simmonds P, Grassly NC. PMID: 37294299; PMCID: PMC10259368.
    View in: PubMed Mentions: 9 Fields:
    Translation:HumansCellsPHPublic Health
  19. Trends and Intensity of Rhinovirus Invasions in Kilifi, Coastal Kenya, Over a 12-Year Period, 2007-2018. Open Forum Infect Dis. 2021 Dec; 8(12):ofab571. Mwita Morobe J, Kamau E, Murunga N, Gatua W, Luka MM, Lewa C, Cheruiyot R, Mutunga M, Odundo C, James Nokes D, Agoti CN. PMID: 34988244; PMCID: PMC8694214.
    View in: PubMed Mentions: 3
  20. Whole genome sequencing of two human rhinovirus A types (A101 and A15) detected in Kenya, 2016-2018. Wellcome Open Res. 2021; 6:178. Luka MM, Kamau E, de Laurent ZR, Morobe JM, Alii LK, Nokes DJ, Agoti CN. PMID: 34522789; PMCID: PMC8408540.2.
    View in: PubMed Mentions: 7
  21. Seroprevalence and Virologic Surveillance of Enterovirus 71 and Coxsackievirus A6, United Kingdom, 2006-2017. Emerg Infect Dis. 2021 09; 27(9):2261-2268. Kamau E, Nguyen D, Celma C, Blomqvist S, Horby P, Simmonds P, Harvala H. PMID: 34423767; PMCID: PMC8386771.
    View in: PubMed Mentions: 21 Fields:
    Translation:HumansCells
  22. Comparative analysis of spatial-temporal patterns of human metapneumovirus and respiratory syncytial virus in Africa using genetic data, 2011-2014. Virol J. 2021 05 29; 18(1):104. Oketch JW, Kamau E, Otieno JR, Mwema A, Lewa C, Isoe E, Nokes DJ, Agoti CN. PMID: 34051792; PMCID: PMC8164071.
    View in: PubMed Mentions: 2 Fields:
    Translation:HumansCells
  23. Enrichment approach for unbiased sequencing of respiratory syncytial virus directly from clinical samples. Wellcome Open Res. 2021; 6:99. Waweru JW, de Laurent Z, Kamau E, Mohammed KS, Gicheru E, Mutunga M, Kibet C, Kinyua J, Nokes DJ, Sande C, Githinji G. PMID: 38779569; PMCID: PMC11109592.
    View in: PubMed Mentions: 2
  24. Endemic chikungunya fever in Kenyan children: a prospective cohort study. BMC Infect Dis. 2021 Feb 18; 21(1):186. Nyamwaya DK, Otiende M, Omuoyo DO, Githinji G, Karanja HK, Gitonga JN, R de Laurent Z, Otieno JR, Sang R, Kamau E, Cheruiyot S, Otieno E, Agoti CN, Bejon P, Thumbi SM, Warimwe GM. PMID: 33602147; PMCID: PMC7889702.
    View in: PubMed Mentions: 19 Fields:
    Translation:HumansCells
  25. Evolution of respiratory syncytial virus genotype BA in Kilifi, Kenya, 15 years on. Sci Rep. 2020 12 03; 10(1):21176. Kamau E, Otieno JR, Lewa CS, Mwema A, Murunga N, Nokes DJ, Agoti CN. PMID: 33273687; PMCID: PMC7712891.
    View in: PubMed Mentions: 10 Fields:
    Translation:HumansCellsPHPublic Health
  26. Surveillance of respiratory viruses among children attending a primary school in rural coastal Kenya. Wellcome Open Res. 2020; 5:63. Adema IW, Kamau E, Uchi Nyiro J, Otieno GP, Lewa C, Munywoki PK, Nokes DJ. PMID: 33102784; PMCID: PMC7569485.
    View in: PubMed Mentions: 9
  27. Molecular Epidemiology of Human Rhinovirus From 1-Year Surveillance Within a School Setting in Rural Coastal Kenya. Open Forum Infect Dis. 2020 Oct; 7(10):ofaa385. Luka MM, Kamau E, Adema I, Munywoki PK, Otieno GP, Gicheru E, Gichuki A, Kibinge N, Agoti CN, Nokes DJ. PMID: 33094115; PMCID: PMC7568438.
    View in: PubMed Mentions: 9
  28. Genomic epidemiology and evolutionary dynamics of respiratory syncytial virus group B in Kilifi, Kenya, 2015-17. Virus Evol. 2020 Jul; 6(2):veaa050. Kamau E, Otieno JR, Murunga N, Oketch JW, Ngoi JM, de Laurent ZR, Mwema A, Nyiro JU, Agoti CN, Nokes DJ. PMID: 32913665; PMCID: PMC7474930.
    View in: PubMed Mentions: 4
  29. Recombination Analysis of Non-Poliovirus Members of the Enterovirus C Species; Restriction of Recombination Events to Members of the Same 3DPol Cluster. Viruses. 2020 06 30; 12(7). Brouwer L, Benschop KSM, Nguyen D, Kamau E, Pajkrt D, Simmonds P, Wolthers KC. PMID: 32629843; PMCID: PMC7412211.
    View in: PubMed Mentions: 11 Fields:
    Translation:HumansCells
  30. Transmission and evolutionary dynamics of human coronavirus OC43 strains in coastal Kenya investigated by partial spike sequence analysis, 2015-16. Virus Evol. 2020 Jan; 6(1):veaa031. Abidha CA, Nyiro J, Kamau E, Abdullahi O, Nokes DJ, Agoti CN. PMID: 32523779; PMCID: PMC7266483.
    View in: PubMed Mentions: 3
  31. Correction to: Whole genome sequencing and phylogenetic analysis of human metapneumovirus strains from Kenya and Zambia. BMC Genomics. 2020 01 28; 21(1):83. Kamau E, Oketch JW, de Laurent ZR, Phan MVT, Agoti CN, Nokes DJ, Cotten M. PMID: 31992192; PMCID: PMC6988315.
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  32. Whole genome sequencing and phylogenetic analysis of human metapneumovirus strains from Kenya and Zambia. BMC Genomics. 2020 Jan 02; 21(1):5. Kamau E, Oketch JW, de Laurent ZR, Phan MVT, Agoti CN, Nokes DJ, Cotten M. PMID: 31898474; PMCID: PMC6941262.
    View in: PubMed Mentions: 5 Fields:
    Translation:HumansCells
  33. Congenital microcephaly unrelated to flavivirus exposure in coastal Kenya. Wellcome Open Res. 2019; 4:179. Barsosio HC, Gitonga JN, Karanja HK, Nyamwaya DK, Omuoyo DO, Kamau E, Hamaluba MM, Nyiro JU, Kitsao BS, Nyaguara A, Mwakio S, Newton CR, Sang R, Wright D, Sanders EJ, Seale AC, Agoti CN, Berkley JA, Bejon P, Warimwe GM. PMID: 32175480; PMCID: PMC7059837.
    View in: PubMed Mentions: 7
  34. Genome Sequences of Human Coronavirus OC43 and NL63, Associated with Respiratory Infections in Kilifi, Kenya. Microbiol Resour Announc. 2019 Nov 14; 8(46). Kamau E, Luka MM, de Laurent ZR, Adema I, Agoti CN, Nokes DJ. PMID: 31727697; PMCID: PMC6856263.
    View in: PubMed Mentions: 3
  35. Human metapneumovirus prevalence and patterns of subgroup persistence identified through surveillance of pediatric pneumonia hospital admissions in coastal Kenya, 2007-2016. BMC Infect Dis. 2019 Aug 30; 19(1):757. Oketch JW, Kamau E, Otieno GP, Otieno JR, Agoti CN, Nokes DJ. PMID: 31470805; PMCID: PMC6716807.
    View in: PubMed Mentions: 19 Fields:
    Translation:HumansCellsPHPublic Health
  36. Increase in Enterovirus D68 Infections in Young Children, United Kingdom, 2006-2016. Emerg Infect Dis. 2019 06; 25(6):1200-1203. Kamau E, Harvala H, Blomqvist S, Nguyen D, Horby P, Pebody R, Simmonds P. PMID: 30855226; PMCID: PMC6537723.
    View in: PubMed Mentions: 25 Fields:
    Translation:HumansCells
  37. Human rhinovirus spatial-temporal epidemiology in rural coastal Kenya, 2015-2016, observed through outpatient surveillance. Wellcome Open Res. 2018; 3:128. Morobe JM, Nyiro JU, Brand S, Kamau E, Gicheru E, Eyase F, Otieno GP, Munywoki PK, Agoti CN, Nokes DJ. PMID: 30483602; PMCID: PMC6234744.
    View in: PubMed Mentions: 12
  38. An Intensive, Active Surveillance Reveals Continuous Invasion and High Diversity of Rhinovirus in Households. J Infect Dis. 2019 03 15; 219(7):1049-1057. Kamau E, Onyango CO, Otieno GP, Kiyuka PK, Agoti CN, Medley GF, Cane PA, Nokes DJ, Munywoki PK. PMID: 30576538; PMCID: PMC6420174.
    View in: PubMed Mentions: 13 Fields:
    Translation:HumansCells
  39. Complete Genome Sequences of Dengue Virus Type 2 Strains from Kilifi, Kenya. Microbiol Resour Announc. 2019 Jan; 8(4). Kamau E, Agoti CN, Ngoi JM, de Laurent ZR, Gitonga J, Cotten M, Phan MVT, Nokes DJ, Delwart E, Sanders E, Warimwe GM. PMID: 30701251; PMCID: PMC6346200.
    View in: PubMed Mentions: 11
  40. Surveillance of respiratory viruses in the outpatient setting in rural coastal Kenya: baseline epidemiological observations. Wellcome Open Res. 2018; 3:89. Nyiro JU, Munywoki P, Kamau E, Agoti C, Gichuki A, Etyang T, Otieno G, Nokes DJ. PMID: 30175247; PMCID: PMC6081997.
    View in: PubMed Mentions: 28
  41. Human Coronavirus NL63 Molecular Epidemiology and Evolutionary Patterns in Rural Coastal Kenya. J Infect Dis. 2018 05 05; 217(11):1728-1739. Kiyuka PK, Agoti CN, Munywoki PK, Njeru R, Bett A, Otieno JR, Otieno GP, Kamau E, Clark TG, van der Hoek L, Kellam P, Nokes DJ, Cotten M. PMID: 29741740; PMCID: PMC6037089.
    View in: PubMed Mentions: 81 Fields:
    Translation:HumansCells
  42. Transmission patterns and evolution of respiratory syncytial virus in a community outbreak identified by genomic analysis. Virus Evol. 2017 Jan; 3(1):vex006. Agoti CN, Munywoki PK, Phan MVT, Otieno JR, Kamau E, Bett A, Kombe I, Githinji G, Medley GF, Cane PA, Kellam P, Cotten M, Nokes DJ. PMID: 28458916; PMCID: PMC5399923.
    View in: PubMed Mentions: 19
  43. A26 Transmission patterns and evolution of RSV in a community outbreak identified by genomic analysis. Virus Evol. 2017 Mar; 3(Suppl 1). Agoti CN, Munywoki PK, Phan MVT, Otieno JR, Kamau E, Bett A, Kombe I, Githinji G, Medley GF, Cane PA, Kellam P, Cotton M, Nokes DJ. PMID: 28845270; PMCID: PMC5565982.
    View in: PubMed Mentions: 3
  44. Spread and Evolution of Respiratory Syncytial Virus A Genotype ON1, Coastal Kenya, 2010-2015. Emerg Infect Dis. 2017 02; 23(2):264-271. Otieno JR, Kamau EM, Agoti CN, Lewa C, Otieno G, Bett A, Ngama M, Cane PA, Nokes DJ. PMID: 28098528; PMCID: PMC5324789.
    View in: PubMed Mentions: 40 Fields:
    Translation:HumansCellsPHPublic Health
  45. Recent sequence variation in probe binding site affected detection of respiratory syncytial virus group B by real-time RT-PCR. J Clin Virol. 2017 03; 88:21-25. Kamau E, Agoti CN, Lewa CS, Oketch J, Owor BE, Otieno GP, Bett A, Cane PA, Nokes DJ. PMID: 28107671; PMCID: PMC5331890.
    View in: PubMed Mentions: 33 Fields:
    Translation:HumansCells
  46. Human Rhinovirus B and C Genomes from Rural Coastal Kenya. Genome Announc. 2016 Jul 28; 4(4). Agoti CN, Kiyuka PK, Kamau E, Munywoki PK, Bett A, van der Hoek L, Kellam P, Nokes DJ, Cotten M. PMID: 27469941; PMCID: PMC4966474.
    View in: PubMed Mentions: 1
  47. Transforming growth factor β2 promotes transcription of COX2 and EP4, leading to a prostaglandin E2-driven autostimulatory loop that enhances virulence of Theileria annulata-transformed macrophages. Infect Immun. 2015 May; 83(5):1869-80. Haidar M, Echebli N, Ding Y, Kamau E, Langsley G. PMID: 25690101; PMCID: PMC4399038.
    View in: PubMed Mentions: 18 Fields:
    Translation:AnimalsCells

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