Qiongyu Li • UCSF Profiles (original) (raw)

  1. Signaling Modulation Mediated by Ligand Water Interactions with the Sodium Site at μOR. ACS Cent Sci. 2024 Aug 28; 10(8):1490-1503. Ople RS, Ramos-Gonzalez N, Li Q, Sobecks BL, Aydin D, Powers AS, Faouzi A, Polacco BJ, Bernhard SM, Appourchaux K, Sribhashyam S, Eans SO, Tsai BA, Dror RO, Varga BR, Wang H, Hüttenhain R, McLaughlin JP, Majumdar S. PMID: 39220695; PMCID: PMC11363324.
    View in: PubMed Mentions: 3
  2. A proximity proteomics pipeline with improved reproducibility and throughput. Mol Syst Biol. 2024 Aug; 20(8):952-971. Zhong X, Li Q, Polacco BJ, Patil T, Marley A, Foussard H, Khare P, Vartak R, Xu J, DiBerto JF, Roth BL, Eckhardt M, von Zastrow M, Krogan NJ, Hüttenhain R. PMID: 38951684; PMCID: PMC11297269.
    View in: PubMed Mentions: 9 Fields:
    Translation:HumansCells
  3. A proximity proteomics pipeline with improved reproducibility and throughput. bioRxiv. 2024 Apr 27. Zhong X, Li Q, Polacco BJ, Patil T, Marley A, Foussard H, Khare P, Vartak R, Xu J, DiBerto JF, Roth BL, Eckhardt M, Zastrow MV, Krogan NJ, Hüttenhain R. PMID: 37090610; PMCID: PMC10120663.
    View in: PubMed Mentions:
  4. Profiling the proximal proteome of the activated μ-opioid receptor. Nat Chem Biol. 2024 Sep; 20(9):1133-1143. Polacco BJ, Lobingier BT, Blythe EE, Abreu N, Khare P, Howard MK, Gonzalez-Hernandez AJ, Xu J, Li Q, Novy B, Naing ZZC, Shoichet BK, Coyote-Maestas W, Levitz J, Krogan NJ, Von Zastrow M, Hüttenhain R. PMID: 38528119; PMCID: PMC11365811.
    View in: PubMed Mentions: 15 Fields:
    Translation:HumansCells
  5. Protein oxidation of fucose environments (POFE) reveals fucose-protein interactions. Chem Sci. 2024 Apr 03; 15(14):5256-5267. Xie Y, Chen S, Alvarez MR, Sheng Y, Li Q, Maverakis E, Lebrilla CB. PMID: 38577366; PMCID: PMC10988611.
    View in: PubMed Mentions: 2
  6. The Global Phosphorylation Landscape of SARS-CoV-2 Infection. Cell. 2020 08 06; 182(3):685-712.e19. Bouhaddou M, Memon D, Meyer B, White KM, Rezelj VV, Correa Marrero M, Polacco BJ, Melnyk JE, Ulferts S, Kaake RM, Batra J, Richards AL, Stevenson E, Gordon DE, Rojc A, Obernier K, Fabius JM, Soucheray M, Miorin L, Moreno E, Koh C, Tran QD, Hardy A, Robinot R, Vallet T, Nilsson-Payant BE, Hernandez-Armenta C, Dunham A, Weigang S, Knerr J, Modak M, Quintero D, Zhou Y, Dugourd A, Valdeolivas A, Patil T, Li Q, Hüttenhain R, Cakir M, Muralidharan M, Kim M, Jang G, Tutuncuoglu B, Hiatt J, Guo JZ, Xu J, Bouhaddou S, Mathy CJP, Gaulton A, Manners EJ, Félix E, Shi Y, Goff M, Lim JK, McBride T, O'Neal MC, Cai Y, Chang JCJ, Broadhurst DJ, Klippsten S, De Wit E, Leach AR, Kortemme T, Shoichet B, Ott M, Saez-Rodriguez J, tenOever BR, Mullins RD, Fischer ER, Kochs G, Grosse R, García-Sastre A, Vignuzzi M, Johnson JR, Shokat KM, Swaney DL, Beltrao P, Krogan NJ. PMID: 32645325; PMCID: PMC7321036.
  7. A SARS-CoV-2 protein interaction map reveals targets for drug repurposing. Nature. 2020 07; 583(7816):459-468. Gordon DE, Jang GM, Bouhaddou M, Xu J, Obernier K, White KM, O'Meara MJ, Rezelj VV, Guo JZ, Swaney DL, Tummino TA, Hüttenhain R, Kaake RM, Richards AL, Tutuncuoglu B, Foussard H, Batra J, Haas K, Modak M, Kim M, Haas P, Polacco BJ, Braberg H, Fabius JM, Eckhardt M, Soucheray M, Bennett MJ, Cakir M, McGregor MJ, Li Q, Meyer B, Roesch F, Vallet T, Mac Kain A, Miorin L, Moreno E, Naing ZZC, Zhou Y, Peng S, Shi Y, Zhang Z, Shen W, Kirby IT, Melnyk JE, Chorba JS, Lou K, Dai SA, Barrio-Hernandez I, Memon D, Hernandez-Armenta C, Lyu J, Mathy CJP, Perica T, Pilla KB, Ganesan SJ, Saltzberg DJ, Rakesh R, Liu X, Rosenthal SB, Calviello L, Venkataramanan S, Liboy-Lugo J, Lin Y, Huang XP, Liu Y, Wankowicz SA, Bohn M, Safari M, Ugur FS, Koh C, Savar NS, Tran QD, Shengjuler D, Fletcher SJ, O'Neal MC, Cai Y, Chang JCJ, Broadhurst DJ, Klippsten S, Sharp PP, Wenzell NA, Kuzuoglu-Ozturk D, Wang HY, Trenker R, Young JM, Cavero DA, Hiatt J, Roth TL, Rathore U, Subramanian A, Noack J, Hubert M, Stroud RM, Frankel AD, Rosenberg OS, Verba KA, Agard DA, Ott M, Emerman M, Jura N, von Zastrow M, Verdin E, Ashworth A, Schwartz O, d'Enfert C, Mukherjee S, Jacobson M, Malik HS, Fujimori DG, Ideker T, Craik CS, Floor SN, Fraser JS, Gross JD, Sali A, Roth BL, Ruggero D, Taunton J, Kortemme T, Beltrao P, Vignuzzi M, García-Sastre A, Shokat KM, Shoichet BK, Krogan NJ. PMID: 32353859; PMCID: PMC7431030.
  8. Metastasis of cholangiocarcinoma is promoted by extended high-mannose glycans. Proc Natl Acad Sci U S A. 2020 04 07; 117(14):7633-7644. Park DD, Phoomak C, Xu G, Olney LP, Tran KA, Park SS, Haigh NE, Luxardi G, Lert-Itthiporn W, Shimoda M, Li Q, Matoba N, Fierro F, Wongkham S, Maverakis E, Lebrilla CB. PMID: 32213588; PMCID: PMC7148571.
    View in: PubMed Mentions: 57 Fields:
    Translation:HumansAnimalsCells
  9. Site-Specific Glycoprofiles of HDL-Associated ApoE are Correlated with HDL Functional Capacity and Unaffected by Short-Term Diet. J Proteome Res. 2019 11 01; 18(11):3977-3984. Zhu C, Wong M, Li Q, Sawrey-Kubicek L, Beals E, Rhodes CH, Sacchi R, Lebrilla CB, Zivkovic AM. PMID: 31545048; PMCID: PMC7480961.
    View in: PubMed Mentions: 13 Fields:
    Translation:HumansCells
  10. Characterization of Cell Glycocalyx with Mass Spectrometry Methods. Cells. 2019 08 13; 8(8). Li Q, Xie Y, Wong M, Lebrilla CB. PMID: 31412618; PMCID: PMC6721671.
    View in: PubMed Mentions: 19 Fields:
    Translation:HumansAnimalsCells
  11. Effects of N-Glycosylation on the Structure, Function, and Stability of a Plant-Made Fc-Fusion Anthrax Decoy Protein. Front Plant Sci. 2019; 10:768. Xiong Y, Karuppanan K, Bernardi A, Li Q, Kommineni V, Dandekar AM, Lebrilla CB, Faller R, McDonald KA, Nandi S. PMID: 31316527; PMCID: PMC6611495.
    View in: PubMed Mentions: 20
  12. Unveiling the metabolic fate of monosaccharides in cell membranes with glycomic and glycoproteomic analyses. Chem Sci. 2019 Aug 07; 10(29):6992-7002. Xu G, Wong M, Li Q, Park D, Cheng Z, Lebrilla CB. PMID: 31588266; PMCID: PMC6676465.
    View in: PubMed Mentions: 11
  13. Identification of potential sialic acid binding proteins on cell membranes by proximity chemical labeling. Chem Sci. 2019 Jun 28; 10(24):6199-6209. Li Q, Xie Y, Xu G, Lebrilla CB. PMID: 31360427; PMCID: PMC6585875.
    View in: PubMed Mentions: 27
  14. Site-Specific Glycosylation Quantitation of 50 Serum Glycoproteins Enhanced by Predictive Glycopeptidomics for Improved Disease Biomarker Discovery. Anal Chem. 2019 04 16; 91(8):5433-5445. Li Q, Kailemia MJ, Merleev AA, Xu G, Serie D, Danan LM, Haj FG, Maverakis E, Lebrilla CB. PMID: 30882205.
    View in: PubMed Mentions: 28 Fields:
    Translation:HumansCells
  15. Streptococcal Siglec-like adhesins recognize different subsets of human plasma glycoproteins: implications for infective endocarditis. Glycobiology. 2018 08 01; 28(8):601-611. Bensing BA, Li Q, Park D, Lebrilla CB, Sullam PM. PMID: 29796594; PMCID: PMC6054165.
    View in: PubMed Mentions: 22 Fields:
    Translation:HumansCells
  16. Transient Recombinant Protein Production in Glycoengineered Nicotiana benthamiana Cell Suspension Culture. Int J Mol Sci. 2018 Apr 16; 19(4). Sukenik SC, Karuppanan K, Li Q, Lebrilla CB, Nandi S, McDonald KA. PMID: 29659495; PMCID: PMC5979281.
    View in: PubMed Mentions: 19 Fields:
    Translation:AnimalsCells
  17. Mass Spectrometry Approaches to Glycomic and Glycoproteomic Analyses. Chem Rev. 2018 09 12; 118(17):7886-7930. Ruhaak LR, Xu G, Li Q, Goonatilleke E, Lebrilla CB. PMID: 29553244; PMCID: PMC7757723.
    View in: PubMed Mentions: 162 Fields:
    Translation:Cells
  18. Glycoform Modification of Secreted Recombinant Glycoproteins through Kifunensine Addition during Transient Vacuum Agroinfiltration. Int J Mol Sci. 2018 Mar 17; 19(3). Xiong Y, Li Q, Kailemia MJ, Lebrilla CB, Nandi S, McDonald KA. PMID: 29562594; PMCID: PMC5877751.
    View in: PubMed Mentions: 5 Fields:
    Translation:HumansAnimalsCells
  19. Recent Advances in the Mass Spectrometry Methods for Glycomics and Cancer. Anal Chem. 2018 01 02; 90(1):208-224. Kailemia MJ, Xu G, Wong M, Li Q, Goonatilleke E, Leon F, Lebrilla CB. PMID: 29049885; PMCID: PMC6200424.
    View in: PubMed Mentions: 35 Fields:
    Translation:HumansCells

This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.

This graph shows the number and percent of publications by field. Fields are based on how the National Library of Medicine (NLM) classifies the publications' journals and might not represent the specific topics of the publications. Note that an individual publication can be assigned to more than one field. As a result, the publication counts in this graph might add up to more than the number of publications the person has written. To see the data as text, click here.

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