Rosalyn Sayaman • UCSF Profiles (original) (raw)

  1. Characterization of the somatic landscape and transcriptional profile of breast tumors from 748 Hispanic/Latina women in California. medRxiv. 2026 Feb 17. Ding YC, Sayaman RW, Wolf D, Mortimer J, Mao A, Fejerman L, Gruber SB, Neuhausen SL, Ziv E. PMID: 41757218; PMCID: PMC12934883.
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  2. Breast cancer risk level and prediction of tumor aggressiveness in the Athena Breast Health Network. Breast Cancer Res Treat. 2026 Jan 28; 215(3):65. Leggat-Barr K, Lewis T, Tice JA, Tsopurashvili E, Sayaman R, Warner P, Malvin K, Sabacan L, Perry-Solomon A, Theiner S, Acerbi I, Griffin A, McGuire J, Lee V, Borowsky AD, Wisdom Study and Athena Breast Health Network Investigators and Advocate Partners, Eklund M, Kaplan C, Hiatt RA, Fiscalini AS, Kerlikowske K, Shieh Y, Esserman L, Van't Veer L. PMID: 41604043; PMCID: PMC12852213.
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    Translation:Humans
  3. YAP1 dysfunction promotes molecular properties linked to breast cancer susceptibility. Cancer Prev Res (Phila). 2025 Dec 23. Fresques T, Lopez JC, Hussey D, Miyano M, Garbe JC, Hinz S, Sayaman RW, Li A, Schmolze D, Van Bedford S, Stampfer MR, LaBarge MA. PMID: 41431390.
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  4. Circulating tumor DNA refines risk stratification of neoadjuvant therapy-resistant breast tumors. Nat Commun. 2025 Dec 09; 16(1):9945. Magbanua MJM, Manon NA, Wolf DM, Rivero-Hinojosa S, Ahmed Z, Sayaman RW, Tin A, Renner D, Kalashnikova E, Brown-Swigart L, Hirst GL, Yau C, Li W, Isaacs C, Shatsky RA, Clark AS, Zimmer A, Delson AL, Rodriguez A, Liu MC, Pohlmann PR, Esserman LJ, Rugo HS, DeMichele A, van 't Veer L. PMID: 41365872; PMCID: PMC12690079.
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    Translation:Humans
  5. Super-enhancer profiling reveals ThPOK/ZBTB7B, a CD4+ cell lineage commitment factor, as a master regulator that restricts breast cancer cells to a luminal non-migratory phenotype. Cell Mol Life Sci. 2025 Nov 13; 82(1):397. Arcuschin CD, Kahrizi K, Sayaman RW, DiBenedetto C, Salaberry PJ, Pirker R, Shen Y, Zakraoui O, Schwarzer C, Scapozza A, Caruso JA, Betancur P, Saba JD, Coppé JP, Barcellos-Hoff MH, Kappes D, van 't Veer L, Schor IE, Muñoz DP. PMID: 41231242; PMCID: PMC12615902.
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    Translation:HumansCells
  6. Immune Subtyping Identifies Patients With Hormone Receptor-Positive Early-Stage Breast Cancer Who Respond to Neoadjuvant Immunotherapy (IO): Results From Five IO Arms of the I-SPY2 Trial. JCO Precis Oncol. 2025 Jun; 9:e2400776. Wolf DM, Yau C, Campbell M, Campbell M, Glas A, Barcaru A, Mittempergher L, Kuilman M, Brown-Swigart L, Hirst G, Basu A, Magbanua M, Sayaman R, Huppert L, Delson A, I-SPY2 Investigators, Symmans WF, Borowsky A, Pohlmann P, Rugo H, Clark A, Yee D, DeMichele A, Perlmutter J, Petricoin EF, Chien J, Stringer-Reasor E, Shatsky R, Liu M, Han H, Soliman H, Isaacs C, Nanda R, Hylton N, Pusztai L, Esserman L, van 't Veer L. PMID: 40526879; PMCID: PMC12184982.
    View in: PubMed Mentions: 1 Fields:
    Translation:Humans
  7. Super-enhancer profiling reveals ThPOK/ZBTB7B, a CD4+ cell lineage commitment factor, as a master regulator that restricts breast cancer cells to a luminal non-migratory phenotype. Res Sq. 2025 Mar 31. Muñoz DP, Arcuschin CD, Kahrizi K, Sayaman RW, DiBenedetto C, Salaberry PJ, Shen Y, Zakroui O, Schwarzer C, Scapozza A, Betancur P, Saba JD, Coppé JP, Barcellos-Hoff MH, Kappes D, Veer LV', Schor IE. PMID: 40235471; PMCID: PMC11998796.
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  8. Luminal epithelial cells integrate variable responses to aging into stereotypical changes that underlie breast cancer susceptibility. Elife. 2024 Nov 15; 13. Sayaman RW, Miyano M, Carlson EG, Senapati P, Zirbes A, Shalabi SF, Todhunter ME, Seewaldt VE, Neuhausen SL, Stampfer MR, Schones DE, LaBarge MA. PMID: 39545637; PMCID: PMC11723586.
    View in: PubMed Mentions: 9 Fields:
    Translation:HumansCells
  9. Transcriptomic analysis of the 12 major human breast cell types reveals mechanisms of cell and tissue function. PLoS Biol. 2024 Nov; 22(11):e3002820. Del Toro K, Sayaman R, Thi K, Licon-Munoz Y, Hines WC. PMID: 39499736; PMCID: PMC11537416.
    View in: PubMed Mentions: 2 Fields:
    Translation:HumansCells
  10. Super-enhancer profiling reveals ThPOK/ZBTB7B, a CD4 + cell lineage commitment factor, as a master regulator that restricts breast cancer cells to a luminal non-migratory phenotype. bioRxiv. 2024 Sep 25. Arcuschin CD, Kahrizi K, Sayaman RW, DiBenedetto C, Shen Y, Salaberry PJ, Zakroui O, Schwarzer C, Scapozza A, Betancur P, Saba JD, Coppé JP, Barcellos-Hoff MH, Kappes D, van 't Veer L, Schor IE, Muñoz DP. PMID: 39386673; PMCID: PMC11463473.
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  11. Comprehensive identification, isolation, and culture of human breast cell types. J Biol Chem. 2024 10; 300(10):107637. Thi K, Del Toro K, Licon-Munoz Y, Sayaman RW, Hines WC. PMID: 39122004; PMCID: PMC11459906.
    View in: PubMed Mentions: 8 Fields:
    Translation:Humans
  12. Cell-free DNA Concentration as a Biomarker of Response and Recurrence in HER2-Negative Breast Cancer Receiving Neoadjuvant Chemotherapy. Clin Cancer Res. 2024 Jun 03; 30(11):2444-2451. Magbanua MJM, Ahmed Z, Sayaman RW, Brown Swigart L, Hirst GL, Yau C, Wolf DM, Li W, Delson AL, Perlmutter J, Pohlmann P, Symmans WF, Yee D, Hylton NM, Esserman LJ, DeMichele AM, Rugo HS, van 't Veer LJ. PMID: 38470545; PMCID: PMC11147708.
    View in: PubMed Mentions: 6 Fields:
    Translation:Humans
  13. Loss of epigenetic suppression of retrotransposons with oncogenic potential in aging mammary luminal epithelial cells. Genome Res. 2023 08; 33(8):1229-1241. Senapati P, Miyano M, Sayaman RW, Basam M, Leung A, LaBarge MA, Schones DE. PMID: 37463750; PMCID: PMC10547379.
    View in: PubMed Mentions: 13 Fields:
    Translation:HumansCells
  14. An integrated tumor, immune and microbiome atlas of colon cancer. Nat Med. 2023 05; 29(5):1273-1286. Roelands J, Kuppen PJK, Ahmed EI, Mall R, Masoodi T, Singh P, Monaco G, Raynaud C, de Miranda NFCC, Ferraro L, Carneiro-Lobo TC, Syed N, Rawat A, Awad A, Decock J, Mifsud W, Miller LD, Sherif S, Mohamed MG, Rinchai D, Van den Eynde M, Sayaman RW, Ziv E, Bertucci F, Petkar MA, Lorenz S, Mathew LS, Wang K, Murugesan S, Chaussabel D, Vahrmeijer AL, Wang E, Ceccarelli A, Fakhro KA, Zoppoli G, Ballestrero A, Tollenaar RAEM, Marincola FM, Galon J, Khodor SA, Ceccarelli M, Hendrickx W, Bedognetti D. PMID: 37202560; PMCID: PMC10202816.
    View in: PubMed Mentions: 116 Fields:
    Translation:HumansCells
  15. Clinical significance and biology of circulating tumor DNA in high-risk early-stage HER2-negative breast cancer receiving neoadjuvant chemotherapy. Cancer Cell. 2023 06 12; 41(6):1091-1102.e4. Magbanua MJM, Brown Swigart L, Ahmed Z, Sayaman RW, Renner D, Kalashnikova E, Hirst GL, Yau C, Wolf DM, Li W, Delson AL, Asare S, Liu MC, Albain K, Chien AJ, Forero-Torres A, Isaacs C, Nanda R, Tripathy D, Rodriguez A, Sethi H, Aleshin A, Rabinowitz M, Perlmutter J, Symmans WF, Yee D, Hylton NM, Esserman LJ, DeMichele AM, Rugo HS, van 't Veer LJ. PMID: 37146605; PMCID: PMC10330514.
    View in: PubMed Mentions: 92 Fields:
    Translation:Humans
  16. Analytic pipelines to assess the relationship between immune response and germline genetics in human tumors. STAR Protoc. 2022 12 16; 3(4):101809. Sayaman RW, Saad M, Heimann C, Hu D, Kunji K, Roelands J, Wolf DM, Huntsman S, Ceccarelli M, Thorsson V, Ziv E, Bedognetti D. PMID: 36595917; PMCID: PMC9772839.
    View in: PubMed Mentions: 2 Fields:
    Translation:HumansCells
  17. Analysis of germline-driven ancestry-associated gene expression in cancers. STAR Protoc. 2022 09 16; 3(3):101586. Chambwe N, Sayaman RW, Hu D, Huntsman S, Cancer Genome Analysis Network, Kemal A, Caesar-Johnson S, Zenklusen JC, Ziv E, Beroukhim R, Cherniack AD. PMID: 35942349; PMCID: PMC9356164.
    View in: PubMed Mentions: 1 Fields:
    Translation:HumansCells
  18. Redefining breast cancer subtypes to guide treatment prioritization and maximize response: Predictive biomarkers across 10 cancer therapies. Cancer Cell. 2022 06 13; 40(6):609-623.e6. Wolf DM, Yau C, Wulfkuhle J, Brown-Swigart L, Gallagher RI, Lee PRE, Zhu Z, Magbanua MJ, Sayaman R, O'Grady N, Basu A, Delson A, Coppé JP, Lu R, Braun J, I-SPY2 Investigators, Asare SM, Sit L, Matthews JB, Perlmutter J, Hylton N, Liu MC, Pohlmann P, Symmans WF, Rugo HS, Isaacs C, DeMichele AM, Yee D, Berry DA, Pusztai L, Petricoin EF, Hirst GL, Esserman LJ, van 't Veer LJ. PMID: 35623341; PMCID: PMC9426306.
    View in: PubMed Mentions: 168 Fields:
    Translation:Humans
  19. Evidence for accelerated aging in mammary epithelia of women carrying germline BRCA1 or BRCA2 mutations. Nat Aging. 2021 09; 1(9):838-849. Shalabi SF, Miyano M, Sayaman RW, Lopez JC, Jokela TA, Todhunter ME, Hinz S, Garbe JC, Stampfer MR, Kessenbrock K, Seewaldt VE, LaBarge MA. PMID: 35187501; PMCID: PMC8849557.
    View in: PubMed Mentions: 41 Fields:
    Translation:Humans
  20. Deep proteome profiling of human mammary epithelia at lineage and age resolution. iScience. 2021 Sep 24; 24(9):103026. Hinz S, Manousopoulou A, Miyano M, Sayaman RW, Aguilera KY, Todhunter ME, Lopez JC, Sohn LL, Wang LD, LaBarge MA. PMID: 34522866; PMCID: PMC8426267.
    View in: PubMed Mentions: 7
  21. Changes in Immune Cell Types with Age in Breast are Consistent with a Decline in Immune Surveillance and Increased Immunosuppression. J Mammary Gland Biol Neoplasia. 2021 09; 26(3):247-261. Zirbes A, Joseph J, Lopez JC, Sayaman RW, Basam M, Seewaldt VL, LaBarge MA. PMID: 34341887; PMCID: PMC8566425.
    View in: PubMed Mentions: 17 Fields:
    Translation:HumansCells
  22. Breast-Specific Molecular Clocks Comprised of ELF5 Expression and Promoter Methylation Identify Individuals Susceptible to Cancer Initiation. Cancer Prev Res (Phila). 2021 08; 14(8):779-794. Miyano M, Sayaman RW, Shalabi SF, Senapati P, Lopez JC, Angarola BL, Hinz S, Zirbes A, Anczukow O, Yee LD, Sedrak MS, Stampfer MR, Seewaldt VL, LaBarge MA. PMID: 34140348; PMCID: PMC8338914.
    View in: PubMed Mentions: 12 Fields:
    Translation:HumansCells
  23. Volume-constrained microcontainers enable myoepithelial functional differentiation in highly parallel mammary organoid culture. iScience. 2021 Apr 23; 24(4):102253. Todhunter ME, Miyano M, Moolamalla DS, Filippov A, Sayaman RW, LaBarge MA. PMID: 33796842; PMCID: PMC7995530.
    View in: PubMed Mentions: 3
  24. Epigenetic changes with age primes mammary luminal epithelia for cancer initiation. bioRxiv. 2021. Sayaman RW, Miyano M, Senapati P, Shalabi S, Zirbes A, Todhunter ME, Seewaldt V, Neuhausen SL, Stampfer MR, Schones DE, LaBarge MA. View Publication.
  25. Germline genetic contribution to the immune landscape of cancer. Immunity. 2021 02 09; 54(2):367-386.e8. Sayaman RW, Saad M, Thorsson V, Hu D, Hendrickx W, Roelands J, Porta-Pardo E, Mokrab Y, Farshidfar F, Kirchhoff T, Sweis RF, Bathe OF, Heimann C, Campbell MJ, Campbell MJ, Stretch C, Huntsman S, Graff RE, Syed N, Radvanyi L, Shelley S, Wolf D, Marincola FM, Ceccarelli M, Galon J, Ziv E, Bedognetti D. PMID: 33567262; PMCID: PMC8414660.
    View in: PubMed Mentions: 98 Fields:
    Translation:HumansCells
  26. Ancestry-associated transcriptomic profiles of breast cancer in patients of African, Arab, and European ancestry. NPJ Breast Cancer. 2021 Feb 08; 7(1):10. Roelands J, Mall R, Almeer H, Thomas R, Mohamed MG, Bedri S, Al-Bader SB, Junejo K, Ziv E, Sayaman RW, Kuppen PJK, Bedognetti D, Hendrickx W, Decock J. PMID: 33558495; PMCID: PMC7870839.
    View in: PubMed Mentions: 23
  27. The landscape of interactions between cancer polygenic risk scores and somatic alterations in cancer cells. bioRxiv. 2020. Porta-Pardo E, Sayaman RW, Ziv E, Valencia A. View Publication.
  28. Comprehensive Analysis of Genetic Ancestry and Its Molecular Correlates in Cancer. Cancer Cell. 2020 05 11; 37(5):639-654.e6. Carrot-Zhang J, Chambwe N, Damrauer JS, Knijnenburg TA, Robertson AG, Yau C, Zhou W, Berger AC, Huang KL, Newberg JY, Mashl RJ, Romanel A, Sayaman RW, Demichelis F, Felau I, Frampton GM, Han S, Hoadley KA, Kemal A, Laird PW, Lazar AJ, Le X, Oak N, Shen H, Wong CK, Zenklusen JC, Ziv E, Cancer Genome Atlas Analysis Network, Cherniack AD, Beroukhim R. PMID: 32396860; PMCID: PMC7328015.
    View in: PubMed Mentions: 168 Fields:
    Translation:HumansCells
  29. Genetic Variation in CCL5 Signaling Genes and Triple Negative Breast Cancer: Susceptibility and Prognosis Implications. Front Oncol. 2019; 9:1328. Shan J, Chouchane A, Mokrab Y, Saad M, Boujassoum S, Sayaman RW, Ziv E, Bouaouina N, Remadi Y, Gabbouj S, Roelands J, Ma X, Bedognetti D, Chouchane L. PMID: 31921621; PMCID: PMC6915105.
    View in: PubMed Mentions: 8
  30. Tissue aging: the integration of collective and variant responses of cells to entropic forces over time. Curr Opin Cell Biol. 2018 10; 54:121-129. Todhunter ME, Sayaman RW, Miyano M, LaBarge MA. PMID: 29908481; PMCID: PMC6258070.
    View in: PubMed Mentions: 15 Fields:
    Translation:Humans
  31. Age-related gene expression in luminal epithelial cells is driven by a microenvironment made from myoepithelial cells. Aging (Albany NY). 2017 10 09; 9(10):2026-2051. Miyano M, Sayaman RW, Stoiber MH, Lin CH, Stampfer MR, Brown JB, LaBarge MA. PMID: 29016359; PMCID: PMC5680554.
    View in: PubMed Mentions: 22 Fields:
    Translation:HumansCells
  32. Discriminating external and internal causes for heading changes in freely flying Drosophila. PLoS Comput Biol. 2013; 9(2):e1002891. Censi A, Straw AD, Sayaman RW, Murray RM, Dickinson MH. PMID: 23468601; PMCID: PMC3585425.
    View in: PubMed Mentions: 28 Fields:
    Translation:Animals
  33. The aerodynamics of hovering flight in Drosophila. J Exp Biol. 2005 Jun; 208(Pt 12):2303-18. Fry SN, Sayaman R, Dickinson MH. PMID: 15939772.
    View in: PubMed Mentions: 72 Fields:
    Translation:Animals
  34. The aerodynamics of free-flight maneuvers in Drosophila. Science. 2003 Apr 18; 300(5618):495-8. Fry SN, Sayaman R, Dickinson MH. PMID: 12702878.
    View in: PubMed Mentions: 95 Fields:
    Translation:Animals

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