Screen for genes regulated during early kidney morphogenesis - PubMed (original) (raw)
Screen for genes regulated during early kidney morphogenesis
C Leimeister et al. Dev Genet. 1999.
Abstract
Kidney development starts with the reciprocal induction of mesenchymal and ureteric bud cells which leads to condensation, epithelialization, and nephron formation in the mesenchyme. To identify changes in gene expression during these processes, we compared differential display polymerase chain reaction (PCR) profiles of uninduced and induced mesenchymal cells. In vitro kidney development in the form of the transfilter organ culture system was used to generate homogeneous cell populations for this type of comparison. Here we describe the isolation of known and novel genetags from this screening. Among the known genes the ufo receptor tyrosine kinase, sFRP2, and the groucho related gene (grg) were verified as being upregulated upon induction. With four of eight novel genes tested, Northern blot analysis proved to be sensitive enough to confirm differential expression. To improve sensitivity and gain additional spatial information, in situ hybridization was performed. Expression analysis of two differential display PCR products, designated C0-5 and M2-4, demonstrated the cell-specific and dynamic expression of these novel genetags in the developing kidney and other tissues. C0-5 transcripts were expressed in the ureteric bud, S-shaped bodies, and in the collecting system. Signals for M2-4, a gene not detectable by Northern blot analysis, were only found in condensing mesenchymal cells and early differentiation stages, but not in the collecting ducts. The large fraction of novel genetags from the present screening that have not yet been analyzed provides a rich resource to clone genetic networks regulating early nephrogenesis.
Similar articles
- Temporal and spatial transcriptional programs in murine kidney development.
Challen G, Gardiner B, Caruana G, Kostoulias X, Martinez G, Crowe M, Taylor DF, Bertram J, Little M, Grimmond SM. Challen G, et al. Physiol Genomics. 2005 Oct 17;23(2):159-71. doi: 10.1152/physiolgenomics.00043.2005. Epub 2005 Jul 5. Physiol Genomics. 2005. PMID: 15998744 - Expression pattern of the rat Lim-1 homeobox gene suggests a dual role during kidney development.
Karavanov AA, Karavanova I, Perantoni A, Dawid IB. Karavanov AA, et al. Int J Dev Biol. 1998 Jan;42(1):61-6. Int J Dev Biol. 1998. PMID: 9496787 - Identification of kidney mesenchymal genes by a combination of microarray analysis and Sall1-GFP knockin mice.
Takasato M, Osafune K, Matsumoto Y, Kataoka Y, Yoshida N, Meguro H, Aburatani H, Asashima M, Nishinakamura R. Takasato M, et al. Mech Dev. 2004 Jun;121(6):547-57. doi: 10.1016/j.mod.2004.04.007. Mech Dev. 2004. PMID: 15172686 - Nephrogenesis regulated by Wnt signaling.
Vainio SJ. Vainio SJ. J Nephrol. 2003 Mar-Apr;16(2):279-85. J Nephrol. 2003. PMID: 12768078 Review. - Novel techniques to identify stage-specific genes during heart development.
Hinton DA. Hinton DA. J Fla Med Assoc. 1996 Feb;83(2):135-7. J Fla Med Assoc. 1996. PMID: 8850209 Review. No abstract available.
Cited by
- The pathogenic role of Notch activation in podocytes.
Niranjan T, Murea M, Susztak K. Niranjan T, et al. Nephron Exp Nephrol. 2009;111(4):e73-9. doi: 10.1159/000209207. Epub 2009 Mar 17. Nephron Exp Nephrol. 2009. PMID: 19293596 Free PMC article. Review. - Molecular anatomy of the kidney: what have we learned from gene expression and functional genomics?
Rumballe B, Georgas K, Wilkinson L, Little M. Rumballe B, et al. Pediatr Nephrol. 2010 Jun;25(6):1005-16. doi: 10.1007/s00467-009-1392-6. Epub 2010 Jan 5. Pediatr Nephrol. 2010. PMID: 20049614 Free PMC article. Review. - Notch in the kidney: development and disease.
Sirin Y, Susztak K. Sirin Y, et al. J Pathol. 2012 Jan;226(2):394-403. doi: 10.1002/path.2967. Epub 2011 Aug 24. J Pathol. 2012. PMID: 21952830 Free PMC article. Review. - The Versatile Gasdermin Family: Their Function and Roles in Diseases.
Zou J, Zheng Y, Huang Y, Tang D, Kang R, Chen R. Zou J, et al. Front Immunol. 2021 Nov 11;12:751533. doi: 10.3389/fimmu.2021.751533. eCollection 2021. Front Immunol. 2021. PMID: 34858408 Free PMC article. Review. - Molecular insights into segmentation along the proximal-distal axis of the nephron.
Kopan R, Cheng HT, Surendran K. Kopan R, et al. J Am Soc Nephrol. 2007 Jul;18(7):2014-20. doi: 10.1681/ASN.2007040453. Epub 2007 Jun 13. J Am Soc Nephrol. 2007. PMID: 17568016 Free PMC article. Review.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Molecular Biology Databases
Research Materials
Miscellaneous