Structure of a CXC chemokine-receptor fragment in complex with interleukin-8 - PubMed (original) (raw)
Structure of a CXC chemokine-receptor fragment in complex with interleukin-8
N J Skelton et al. Structure. 1999.
Free article
Abstract
Background: Interactions between CXC chemokines (e.g. interleukin-8, IL-8) and their receptors (e.g. CXCR-1) have a key role in host defense and disease by attracting and upregulating neutrophils to sites of inflammation. The transmembrane nature of the receptor impedes structure-based understanding of ligand interactions. Linear peptides based on the N-terminal, extracellular portion of the receptor CXCR-1 do bind to IL-8, however, and inhibit the binding of IL-8 to the full-length receptor.
Results: The NMR solution structure of the complex formed between IL-8 and one such receptor-based peptide indicates that a cleft between a loop and a beta hairpin constitute part of the receptor interaction surface on IL-8. Nine residues from the C terminus of the receptor peptide (corresponding to Pro21-Pro29 of CXCR-1) occupy the cleft in an extended fashion. Intermolecular contacts are mostly hydrophobic and sidechain mediated.
Conclusions: The results offer the first details at an atomic level of the interaction between a chemokine and its receptor. Consideration of other biochemical data allow extrapolation to a model for the interaction of IL-8 with the full-length receptor. In this model, the heparin-binding residues of IL-8 are exposed, thereby allowing presentation of the chemokine from endothelial cell-surface glycosaminoglycans. This first glimpse of how IL-8 binds to its receptor provides a foundation for the structure-based design of chemokine antagonists.
Similar articles
- Receptor recognition and specificity of interleukin-8 is determined by residues that cluster near a surface-accessible hydrophobic pocket.
Hammond ME, Shyamala V, Siani MA, Gallegos CA, Feucht PH, Abbott J, Lapointe GR, Moghadam M, Khoja H, Zakel J, Tekamp-Olson P. Hammond ME, et al. J Biol Chem. 1996 Apr 5;271(14):8228-35. doi: 10.1074/jbc.271.14.8228. J Biol Chem. 1996. PMID: 8626516 - Receptor-binding conformation of the "ELR" motif of IL-8: X-ray structure of the L5C/H33C variant at 2.35 A resolution.
Gerber N, Lowman H, Artis DR, Eigenbrot C. Gerber N, et al. Proteins. 2000 Mar 1;38(4):361-7. Proteins. 2000. PMID: 10707023 - Neutrophil receptors for interleukin-8 and related CXC chemokines.
Murphy PM. Murphy PM. Semin Hematol. 1997 Oct;34(4):311-8. Semin Hematol. 1997. PMID: 9347581 Review. - The interleukin-8-receptor family: from chemokines to malaria.
Horuk R. Horuk R. Immunol Today. 1994 Apr;15(4):169-74. doi: 10.1016/0167-5699(94)90314-X. Immunol Today. 1994. PMID: 8198708 Review.
Cited by
- Computational design of anti-cancer peptides tailored to target specific tumor markers.
Naeem A, Noureen N, Al-Naemi SK, Al-Emadi JA, Khan MJ. Naeem A, et al. BMC Chem. 2024 Feb 22;18(1):39. doi: 10.1186/s13065-024-01143-0. BMC Chem. 2024. PMID: 38388460 Free PMC article. - Natural carboxyterminal truncation of human CXCL10 attenuates glycosaminoglycan binding, CXCR3A signaling and lymphocyte chemotaxis, while retaining angiostatic activity.
Dillemans L, Yu K, De Zutter A, Noppen S, Gouwy M, Berghmans N, Verhallen L, De Bondt M, Vanbrabant L, Brusselmans S, Martens E, Schols D, Verschueren P, Rosenkilde MM, Marques PE, Struyf S, Proost P. Dillemans L, et al. Cell Commun Signal. 2024 Feb 2;22(1):94. doi: 10.1186/s12964-023-01453-1. Cell Commun Signal. 2024. PMID: 38308278 Free PMC article. - Heterodimers Are an Integral Component of Chemokine Signaling Repertoire.
Kaffashi K, Dréau D, Nesmelova IV. Kaffashi K, et al. Int J Mol Sci. 2023 Jul 19;24(14):11639. doi: 10.3390/ijms241411639. Int J Mol Sci. 2023. PMID: 37511398 Free PMC article. Review. - Conformational plasticity and dynamic interactions of the N-terminal domain of the chemokine receptor CXCR1.
Kharche S, Joshi M, Chattopadhyay A, Sengupta D. Kharche S, et al. PLoS Comput Biol. 2021 May 20;17(5):e1008593. doi: 10.1371/journal.pcbi.1008593. eCollection 2021 May. PLoS Comput Biol. 2021. PMID: 34014914 Free PMC article. - Long-Range Coupled Motions Underlie Ligand Recognition by a Chemokine Receptor.
Sepuru KM, Nair V, Prakash P, Gorfe AA, Rajarathnam K. Sepuru KM, et al. iScience. 2020 Nov 26;23(12):101858. doi: 10.1016/j.isci.2020.101858. eCollection 2020 Dec 18. iScience. 2020. PMID: 33344917 Free PMC article.
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases