Full-length human L1 insertions retain the capacity for high frequency retrotransposition in cultured cells - PubMed (original) (raw)
Full-length human L1 insertions retain the capacity for high frequency retrotransposition in cultured cells
M L Kimberland et al. Hum Mol Genet. 1999 Aug.
Abstract
Functional L1 elements are autonomous retrotransposons that can insert into human genes and cause disease. To date, 10 of 12 known L1 retrotranspositions into human genes have been found to be 5"-truncated and incapable of further retrotransposition. Here we report the nucleotide sequences of the two full-length L1 elements, L1beta-thal and L1RP, that have inserted into the beta-globin and retinitis pigmentosa-2 (RP2) genes, respectively. L1beta-thal is 99. 4% identical to a consensus sequence of active human L1s, while L1RP is 99.9% identical. Both elements retain impressive capacity for high frequency retrotransposition in cultured HeLa cells. Indeed, L1RP is the most active L1 isolated to date. Our data indicate that not all L1 insertions into human genes are 'dead on arrival'. Our findings also lend further credence to the concept of cis preference, that the proteins encoded by a particular L1 preferentially act upon their encoding RNA as opposed to other L1 RNAs.
Similar articles
- Many human L1 elements are capable of retrotransposition.
Sassaman DM, Dombroski BA, Moran JV, Kimberland ML, Naas TP, DeBerardinis RJ, Gabriel A, Swergold GD, Kazazian HH Jr. Sassaman DM, et al. Nat Genet. 1997 May;16(1):37-43. doi: 10.1038/ng0597-37. Nat Genet. 1997. PMID: 9140393 - L1 retrotransposition is suppressed by endogenously encoded small interfering RNAs in human cultured cells.
Yang N, Kazazian HH Jr. Yang N, et al. Nat Struct Mol Biol. 2006 Sep;13(9):763-71. doi: 10.1038/nsmb1141. Epub 2006 Aug 27. Nat Struct Mol Biol. 2006. PMID: 16936727 - Retrotransposition of marked SVA elements by human L1s in cultured cells.
Hancks DC, Goodier JL, Mandal PK, Cheung LE, Kazazian HH Jr. Hancks DC, et al. Hum Mol Genet. 2011 Sep 1;20(17):3386-400. doi: 10.1093/hmg/ddr245. Epub 2011 Jun 2. Hum Mol Genet. 2011. PMID: 21636526 Free PMC article. - LINE-1 retrotransposons: modulators of quantity and quality of mammalian gene expression?
Han JS, Boeke JD. Han JS, et al. Bioessays. 2005 Aug;27(8):775-84. doi: 10.1002/bies.20257. Bioessays. 2005. PMID: 16015595 Review.
Cited by
- Discrete subcellular partitioning of human retrotransposon RNAs despite a common mechanism of genome insertion.
Goodier JL, Mandal PK, Zhang L, Kazazian HH Jr. Goodier JL, et al. Hum Mol Genet. 2010 May 1;19(9):1712-25. doi: 10.1093/hmg/ddq048. Epub 2010 Feb 10. Hum Mol Genet. 2010. PMID: 20147320 Free PMC article. - SQuIRE reveals locus-specific regulation of interspersed repeat expression.
Yang WR, Ardeljan D, Pacyna CN, Payer LM, Burns KH. Yang WR, et al. Nucleic Acids Res. 2019 Mar 18;47(5):e27. doi: 10.1093/nar/gky1301. Nucleic Acids Res. 2019. PMID: 30624635 Free PMC article. - The non-autonomous retrotransposon SVA is trans-mobilized by the human LINE-1 protein machinery.
Raiz J, Damert A, Chira S, Held U, Klawitter S, Hamdorf M, Löwer J, Strätling WH, Löwer R, Schumann GG. Raiz J, et al. Nucleic Acids Res. 2012 Feb;40(4):1666-83. doi: 10.1093/nar/gkr863. Epub 2011 Nov 3. Nucleic Acids Res. 2012. PMID: 22053090 Free PMC article. - Familial retinoblastoma due to intronic LINE-1 insertion causes aberrant and noncanonical mRNA splicing of the RB1 gene.
Rodríguez-Martín C, Cidre F, Fernández-Teijeiro A, Gómez-Mariano G, de la Vega L, Ramos P, Zaballos Á, Monzón S, Alonso J. Rodríguez-Martín C, et al. J Hum Genet. 2016 May;61(5):463-6. doi: 10.1038/jhg.2015.173. Epub 2016 Jan 14. J Hum Genet. 2016. PMID: 26763876 - Purification of L1-Ribonucleoprotein Particles (L1-RNPs) from Cultured Human Cells.
Mandal PK, Kazazian HH Jr. Mandal PK, et al. Methods Mol Biol. 2016;1400:299-310. doi: 10.1007/978-1-4939-3372-3_19. Methods Mol Biol. 2016. PMID: 26895061 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases