Expression of the gene for mitoribosomal protein S12 is controlled in human cells at the levels of transcription, RNA splicing, and translation - PubMed (original) (raw)
. 1999 Nov 5;274(45):31853-62.
doi: 10.1074/jbc.274.45.31853.
Affiliations
- PMID: 10542210
- DOI: 10.1074/jbc.274.45.31853
Free article
Expression of the gene for mitoribosomal protein S12 is controlled in human cells at the levels of transcription, RNA splicing, and translation
P Mariottini et al. J Biol Chem. 1999.
Free article
Abstract
The human gene RPMS12 encodes a protein similar to bacterial ribosomal protein S12 and is proposed to represent the human mitochondrial orthologue. RPMS12 reporter gene expression in cultured human cells supports the idea that the gene product is mitochondrial and is localized to the inner membrane. Human cells contain at least four structurally distinct RPMS12 mRNAs that differ in their 5'-untranslated region (5'-UTR) as a result of alternate splicing and of 5' end heterogeneity. All of them encode the same polypeptide. The full 5'-UTR contains two types of sequence element implicated elsewhere in translational regulation as follows: a short upstream open reading frame and an oligopyrimidine tract similar to that found at the 5' end of mRNAs encoding other growth-regulated proteins, including those of cytosolic ribosomes. The fully spliced (short) mRNA is the predominant form in all cell types studied and is translationally down-regulated in cultured cells in response to serum starvation, even though it lacks both of the putative translational regulatory elements. By contrast, other splice variants containing one or both of these elements are not translationally regulated by growth status but are translated poorly in both growing and non-growing cells. Reporter analysis identified a 26-nucleotide tract of the 5'-UTR of the short mRNA that is essential for translational down-regulation in growth-inhibited cells. Such experiments also confirmed that the 5'-UTR of the longer mRNA variants contains negative regulatory elements for translation. Tissue representation of RPMS12 mRNA is highly variable, following a typical mitochondrial pattern, but the relative levels of the different splice variants are similar in different tissues. These findings indicate a complex, multilevel regulation of RPMS12 gene expression in response to signals mediating growth, tissue specialization, and probably metabolic needs.
Similar articles
- Characterization of the human mitochondrial ribosomal S12 gene.
Johnson DF, Hamon M, Fischel-Ghodsian N. Johnson DF, et al. Genomics. 1998 Sep 15;52(3):363-8. doi: 10.1006/geno.1998.5448. Genomics. 1998. PMID: 9790755 - Vertebrate mRNAs with a 5'-terminal pyrimidine tract are candidates for translational repression in quiescent cells: characterization of the translational cis-regulatory element.
Avni D, Shama S, Loreni F, Meyuhas O. Avni D, et al. Mol Cell Biol. 1994 Jun;14(6):3822-33. doi: 10.1128/mcb.14.6.3822-3833.1994. Mol Cell Biol. 1994. PMID: 8196625 Free PMC article. - The 5' terminal oligopyrimidine tract confers translational control on TOP mRNAs in a cell type- and sequence context-dependent manner.
Avni D, Biberman Y, Meyuhas O. Avni D, et al. Nucleic Acids Res. 1997 Mar 1;25(5):995-1001. doi: 10.1093/nar/25.5.995. Nucleic Acids Res. 1997. PMID: 9023110 Free PMC article. - Structure and expression of ribosomal protein genes in Xenopus laevis.
Amaldi F, Camacho-Vanegas O, Cardinall B, Cecconi F, Crosio C, Loreni F, Mariottini P, Pellizzoni L, Pierandrei-Amaldi P. Amaldi F, et al. Biochem Cell Biol. 1995 Nov-Dec;73(11-12):969-77. doi: 10.1139/o95-104. Biochem Cell Biol. 1995. PMID: 8722012 Review. - Translational control of ribosomal protein production in mammalian cells.
Perry RP, Meyuhas O. Perry RP, et al. Enzyme. 1990;44(1-4):83-92. doi: 10.1159/000468749. Enzyme. 1990. PMID: 2133661 Review.
Cited by
- Screening on human hepatoma cell line HepG-2 nucleus and cytoplasm protein after CDK2 silencing by RNAi.
Han X, Wang Z, Wang W, Bai R, Zhao P, Shang J. Han X, et al. Cytotechnology. 2014 Aug;66(4):567-74. doi: 10.1007/s10616-013-9604-0. Epub 2014 May 7. Cytotechnology. 2014. PMID: 24801578 Free PMC article. - UTRdb and UTRsite: specialized databases of sequences and functional elements of 5' and 3' untranslated regions of eukaryotic mRNAs. Update 2002.
Pesole G, Liuni S, Grillo G, Licciulli F, Mignone F, Gissi C, Saccone C. Pesole G, et al. Nucleic Acids Res. 2002 Jan 1;30(1):335-40. doi: 10.1093/nar/30.1.335. Nucleic Acids Res. 2002. PMID: 11752330 Free PMC article. - Regulation of mitochondrial ribosomal protein S29 (MRPS29) expression by a 5'-upstream open reading frame.
Han MJ, Chiu DT, Koc EC. Han MJ, et al. Mitochondrion. 2010 Apr;10(3):274-83. doi: 10.1016/j.mito.2009.12.150. Epub 2010 Jan 14. Mitochondrion. 2010. PMID: 20079882 Free PMC article. - Mitochondria Dysfunction in Frontotemporal Dementia/Amyotrophic Lateral Sclerosis: Lessons From Drosophila Models.
Anoar S, Woodling NS, Niccoli T. Anoar S, et al. Front Neurosci. 2021 Nov 24;15:786076. doi: 10.3389/fnins.2021.786076. eCollection 2021. Front Neurosci. 2021. PMID: 34899176 Free PMC article. Review. - Identification of four proteins from the small subunit of the mammalian mitochondrial ribosome using a proteomics approach.
Koc EC, Burkhart W, Blackburn K, Koc H, Moseley A, Spremulli LL. Koc EC, et al. Protein Sci. 2001 Mar;10(3):471-81. doi: 10.1110/ps.35301. Protein Sci. 2001. PMID: 11344316 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Molecular Biology Databases