Heritable and inducible genetic interference by double-stranded RNA encoded by transgenes - PubMed (original) (raw)
Heritable and inducible genetic interference by double-stranded RNA encoded by transgenes
N Tavernarakis et al. Nat Genet. 2000 Feb.
Abstract
Double-stranded RNA interference (RNAi) is an effective method for disrupting expression of specific genes in Caenorhabditis elegans and other organisms. Applications of this reverse-genetics tool, however, are somewhat restricted in nematodes because introduced dsRNA is not stably inherited. Another difficulty is that RNAi disruption of late-acting genes has been generally less consistent than that of embryonically expressed genes, perhaps because the concentration of dsRNA becomes lower as cellular division proceeds or as developmental time advances. In particular, some neuronally expressed genes appear refractory to dsRNA-mediated interference. We sought to extend the applicability of RNAi by in vivo expression of heritable inverted-repeat (IR) genes. We assayed the efficacy of in vivo-driven RNAi in three situations for which heritable, inducible RNAi would be advantageous: (i) production of large numbers of animals deficient for gene activities required for viability or reproduction; (ii) generation of large populations of phenocopy mutants for biochemical analysis; and (iii) effective gene inactivation in the nervous system. We report that heritable IR genes confer potent and specific gene inactivation for each of these applications. We suggest that a similar strategy might be used to test for dsRNA interference effects in higher organisms in which it is feasible to construct transgenic animals, but impossible to directly or transiently introduce high concentrations of dsRNA.
Similar articles
- Systemic RNAi in C. elegans requires the putative transmembrane protein SID-1.
Winston WM, Molodowitch C, Hunter CP. Winston WM, et al. Science. 2002 Mar 29;295(5564):2456-9. doi: 10.1126/science.1068836. Epub 2002 Feb 7. Science. 2002. PMID: 11834782 - The use of double-stranded RNA to knock down specific gene activity.
Montgomery MK. Montgomery MK. Methods Mol Biol. 2004;260:129-44. doi: 10.1385/1-59259-755-6:129. Methods Mol Biol. 2004. PMID: 15020807 - Heritable and inducible gene knockdown in C. elegans using Wormgate and the ORFeome.
Johnson NM, Behm CA, Trowell SC. Johnson NM, et al. Gene. 2005 Oct 10;359:26-34. doi: 10.1016/j.gene.2005.05.034. Gene. 2005. PMID: 15994029 - Uncover genetic interactions in Caenorhabditis elegans by RNA interference.
Fortunato A, Fraser AG. Fortunato A, et al. Biosci Rep. 2005 Oct-Dec;25(5-6):299-307. doi: 10.1007/s10540-005-2892-7. Biosci Rep. 2005. PMID: 16307378 Review. - RNAi and double-strand RNA.
Sharp PA. Sharp PA. Genes Dev. 1999 Jan 15;13(2):139-41. Genes Dev. 1999. PMID: 9925636 Review. No abstract available.
Cited by
- Optimization of RNAi efficiency in PVD neuron of C. elegans.
Singh P, Selvarasu K, Ghosh-Roy A. Singh P, et al. PLoS One. 2024 Mar 18;19(3):e0298766. doi: 10.1371/journal.pone.0298766. eCollection 2024. PLoS One. 2024. PMID: 38498505 Free PMC article. - A new AMPK isoform mediates glucose-restriction induced longevity non-cell autonomously by promoting membrane fluidity.
Jeong JH, Han JS, Jung Y, Lee SM, Park SH, Park M, Shin MG, Kim N, Kang MS, Kim S, Lee KP, Kwon KS, Kim CA, Yang YR, Hwang GS, Kwon ES. Jeong JH, et al. Nat Commun. 2023 Jan 18;14(1):288. doi: 10.1038/s41467-023-35952-z. Nat Commun. 2023. PMID: 36653384 Free PMC article. - Glial regulators of ions and solutes required for specific chemosensory functions in Caenorhabditis elegans.
Wang L, Graziano B, Encalada N, Fernandez-Abascal J, Kaplan DH, Bianchi L. Wang L, et al. iScience. 2022 Dec 1;25(12):105684. doi: 10.1016/j.isci.2022.105684. eCollection 2022 Dec 22. iScience. 2022. PMID: 36567707 Free PMC article. - HDAC3 Knockdown Dysregulates Juvenile Hormone and Apoptosis-Related Genes in Helicoverpa armigera.
Chang H, Xu Z, Li W, Cai C, Wang W, Ge P, Jia X, Li Y, Ding T, Ma W, Banaei-Moghaddam AM, Mo H, Ren M. Chang H, et al. Int J Mol Sci. 2022 Nov 26;23(23):14820. doi: 10.3390/ijms232314820. Int J Mol Sci. 2022. PMID: 36499148 Free PMC article. - Nematode chromosomes.
Carlton PM, Davis RE, Ahmed S. Carlton PM, et al. Genetics. 2022 May 5;221(1):iyac014. doi: 10.1093/genetics/iyac014. Genetics. 2022. PMID: 35323874 Free PMC article. Review.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources