Mutational analysis of 4-coumarate:CoA ligase identifies functionally important amino acids and verifies its close relationship to other adenylate-forming enzymes - PubMed (original) (raw)
Mutational analysis of 4-coumarate:CoA ligase identifies functionally important amino acids and verifies its close relationship to other adenylate-forming enzymes
H Stuible et al. FEBS Lett. 2000.
Free article
Abstract
4-Coumarate:coenzyme A ligase (4CL) is a key enzyme of general phenylpropanoid metabolism which provides the precursors for a large variety of important plant secondary products, such as lignin, flavonoids, or phytoalexins. To identify amino acids important for 4CL activity, eight mutations were introduced into Arabidopsis thaliana At4CL2. Determination of specific activities and K(m) values for ATP and caffeate of the heterologously expressed and purified proteins identified four distinct classes of mutants: enzymes with little or no catalytic activity; enzymes with greatly reduced activity but wild-type K(m) values; enzymes with drastically altered K(m) values; and enzymes with almost wild-type properties. The latter class includes replacement of a cysteine residue which is strictly conserved in 4CLs and had previously been assumed to be directly involved in catalysis. These results substantiate the close relationship between 4CL and other adenylate-forming enzymes such as luciferases, peptide synthetases, and fatty acyl-CoA synthetases.
Similar articles
- Identification of 4-coumarate:coenzyme A ligase (4CL) substrate recognition domains.
Ehlting J, Shin JJ, Douglas CJ. Ehlting J, et al. Plant J. 2001 Sep;27(5):455-65. doi: 10.1046/j.1365-313x.2001.01122.x. Plant J. 2001. PMID: 11576429 - Structure and evolution of 4-coumarate:coenzyme A ligase (4CL) gene families.
Cukovic D, Ehlting J, VanZiffle JA, Douglas CJ. Cukovic D, et al. Biol Chem. 2001 Apr;382(4):645-54. doi: 10.1515/BC.2001.076. Biol Chem. 2001. PMID: 11405227 - Cinnamate:coenzyme A ligase from the filamentous bacterium streptomyces coelicolor A3(2).
Kaneko M, Ohnishi Y, Horinouchi S. Kaneko M, et al. J Bacteriol. 2003 Jan;185(1):20-7. doi: 10.1128/JB.185.1.20-27.2003. J Bacteriol. 2003. PMID: 12486036 Free PMC article. - Structural, functional and evolutionary diversity of 4-coumarate-CoA ligase in plants.
Lavhale SG, Kalunke RM, Giri AP. Lavhale SG, et al. Planta. 2018 Nov;248(5):1063-1078. doi: 10.1007/s00425-018-2965-z. Epub 2018 Aug 4. Planta. 2018. PMID: 30078075 Review. - Aryl Coenzyme A Ligases, a Subfamily of the Adenylate-Forming Enzyme Superfamily.
Arnold ME, Kaplieva-Dudek I, Heker I, Meckenstock RU. Arnold ME, et al. Appl Environ Microbiol. 2021 Aug 26;87(18):e0069021. doi: 10.1128/AEM.00690-21. Epub 2021 Aug 26. Appl Environ Microbiol. 2021. PMID: 34260306 Free PMC article. Review.
Cited by
- 4-Coumarate:coenzyme A ligase has the catalytic capacity to synthesize and reuse various (di)adenosine polyphosphates.
Pietrowska-Borek M, Stuible HP, Kombrink E, Guranowski A. Pietrowska-Borek M, et al. Plant Physiol. 2003 Mar;131(3):1401-10. doi: 10.1104/pp.011684. Plant Physiol. 2003. PMID: 12644689 Free PMC article. - Heterologous production of flavanones in Escherichia coli: potential for combinatorial biosynthesis of flavonoids in bacteria.
Kaneko M, Hwang EI, Ohnishi Y, Horinouchi S. Kaneko M, et al. J Ind Microbiol Biotechnol. 2003 Aug;30(8):456-61. doi: 10.1007/s10295-003-0061-1. Epub 2003 May 21. J Ind Microbiol Biotechnol. 2003. PMID: 12759810 Review. - Crystal structure of DhbE, an archetype for aryl acid activating domains of modular nonribosomal peptide synthetases.
May JJ, Kessler N, Marahiel MA, Stubbs MT. May JJ, et al. Proc Natl Acad Sci U S A. 2002 Sep 17;99(19):12120-5. doi: 10.1073/pnas.182156699. Epub 2002 Sep 9. Proc Natl Acad Sci U S A. 2002. PMID: 12221282 Free PMC article. - Cloning and Functional Characterization of Two 4-Coumarate: CoA Ligase Genes from Selaginella moellendorffii.
Liu XY, Wang PP, Wu YF, Cheng AX, Lou HX. Liu XY, et al. Molecules. 2018 Mar 7;23(3):595. doi: 10.3390/molecules23030595. Molecules. 2018. PMID: 29518887 Free PMC article. - %MinMax: A versatile tool for calculating and comparing synonymous codon usage and its impact on protein folding.
Rodriguez A, Wright G, Emrich S, Clark PL. Rodriguez A, et al. Protein Sci. 2018 Jan;27(1):356-362. doi: 10.1002/pro.3336. Epub 2017 Nov 21. Protein Sci. 2018. PMID: 29090506 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases