The European Large Subunit Ribosomal RNA Database - PubMed (original) (raw)

The European Large Subunit Ribosomal RNA Database

J Wuyts et al. Nucleic Acids Res. 2001.

Abstract

The European Large Subunit Ribosomal RNA Database compiles all complete or nearly complete large subunit ribosomal RNA sequences available from public sequence databases. These are provided in aligned format and the secondary structure, as derived by comparative sequence analysis, is included. Additional information about the sequences such as literature references and taxonomic information is also included. The database is available from our WWW server at http://rrna.uia.ac.be/lsu/.

PubMed Disclaimer

Figures

Figure 1

Secondary structure model of LSU rRNA from the Apicomplexan T.gondii (EMBL accession number X75453). The sequence is written clockwise from the 5′- to the 3′-terminus.

References

1. Schnare M.N., Cook,J.R. and Gray,M.W. (1994) Fourteen internal transcribed spacers in the circular ribosomal DNA of Euglena gracilis. J. Mol. Biol., 215, 85–91. - PubMed
1. Ban N., Nissen,P., Hansen,J., Moore,P.B. and Steitz,T.A. (2000) The complete atomic structure of the large ribosomal subunit at 2.4Å resolution. Science, 289, 905–920. - PubMed
1. De Rijk P. and De Wachter,R. (1997) RnaViz, a program for the visualisation of RNA secondary structure. Nucleic Acids Res., 25, 4679–4684. - PMC - PubMed
1. Baker W., van den Broek,A., Camon,E., Hingamp,P., Sterk,P., Stoesser,G. and Tuli,M.A. (2000) The EMBL Nucleotide Sequence Database. Nucleic Acids Res., 28, 19–23. Updated article in this issue: Nucleic Acids Res. (2001), 29, 17–21. - PMC - PubMed
1. De Rijk P. and De Wachter,R. (1993) DCSE, an interactive tool for sequence alignment and secondary structure research. Comput. Appl. Biosci., 9, 735–740. - PubMed

The European Large Subunit Ribosomal RNA Database - PubMed (original) (raw)