Small nucleolar RNA-guided post-transcriptional modification of cellular RNAs - PubMed (original) (raw)
Review
Small nucleolar RNA-guided post-transcriptional modification of cellular RNAs
T Kiss. EMBO J. 2001.
No abstract available
Figures
Fig. 1. Structure and function of (A) 2′-_O_-methylation and (B) pseudouridylation guide snoRNAs. The consensus sequences of boxes C, C′, D, D′, H and ACA are indicated (R is a purine and N stands for any nucleotide). Models for molecular selection of 2′-_O_-methylated nucleotides and pseudouridine were adopted from Kiss-László et al. (1998) and Ganot et al. (1997a), respectively.
Fig. 2. Biogenesis and function of 2′-_O_-methylation and pseudouridylation guide snoRNAs. In mammalian cells, all guide RNAs are synthesized within introns of pre-mRNAs in the nucleoplasm. Most intronic snoRNAs are processed from the removed and debranched host intron by exonucleolytic activities. It remains unclear whether 5′ and 3′ end processing of snoRNAs occurs already in the nucleoplasm, or later in the nucleolus. Guide snoRNAs accumulating in the nucleolus direct 2′-_O_-methylation and pseudouridylation of the 18S, 5.8S and 28S rRNAs, the U6 snRNA and perhaps other cellular RNAs, including tRNAs, the signal recognition particle (SRP) and telomerase RNAs. It seems that box C/D, but not box H/ACA snoRNAs, transiently appear in the Cajal body before accumulating in the nucleolus. Some guide RNAs (scaRNAs) directing modification of the pol II-transcribed spliceosomal snRNAs accumulate in the Cajal body (CB). For other details, see the text.
Similar articles
- Small nucleolar RNAs that guide modification in trypanosomatids: repertoire, targets, genome organisation, and unique functions.
Uliel S, Liang XH, Unger R, Michaeli S. Uliel S, et al. Int J Parasitol. 2004 Mar 29;34(4):445-54. doi: 10.1016/j.ijpara.2003.10.014. Int J Parasitol. 2004. PMID: 15013734 Review. - SnoRNAs as tools for RNA cleavage and modification.
Ni J, Samarsky DA, Liu B, Ferbeyre G, Cedergren R, Fournier MJ. Ni J, et al. Nucleic Acids Symp Ser. 1997;(36):61-3. Nucleic Acids Symp Ser. 1997. PMID: 9478207 Review. - Probing RNA in vivo with methylation guide small nucleolar RNAs.
Liu B, Ni J, Fournier MJ. Liu B, et al. Methods. 2001 Mar;23(3):276-86. doi: 10.1006/meth.2000.1138. Methods. 2001. PMID: 11243840 - Guided tours: from precursor snoRNA to functional snoRNP.
Weinstein LB, Steitz JA. Weinstein LB, et al. Curr Opin Cell Biol. 1999 Jun;11(3):378-84. doi: 10.1016/S0955-0674(99)80053-2. Curr Opin Cell Biol. 1999. PMID: 10395551 Review. - [Small nucleolar RNA].
Pieńkowska J, Szweykowska-Kulińska Z. Pieńkowska J, et al. Postepy Biochem. 1998;44(2):102-13. Postepy Biochem. 1998. PMID: 9770233 Review. Polish. No abstract available.
Cited by
- On the predictibility of A-minor motifs from their local contexts.
Gianfrotta C, Reinharz V, Lespinet O, Barth D, Denise A. Gianfrotta C, et al. RNA Biol. 2022 Jan;19(1):1208-1227. doi: 10.1080/15476286.2022.2144611. RNA Biol. 2022. PMID: 36384383 Free PMC article. - Non-coding RNAs: the new central dogma of cancer biology.
Saw PE, Xu X, Chen J, Song EW. Saw PE, et al. Sci China Life Sci. 2021 Jan;64(1):22-50. doi: 10.1007/s11427-020-1700-9. Epub 2020 Sep 11. Sci China Life Sci. 2021. PMID: 32930921 Review. - Transcription and tyranny in the nucleolus: the organization, activation, dominance and repression of ribosomal RNA genes.
Pikaard CS. Pikaard CS. Arabidopsis Book. 2002;1:e0083. doi: 10.1199/tab.0083. Epub 2002 Aug 12. Arabidopsis Book. 2002. PMID: 22303219 Free PMC article. No abstract available. - SNORD76, a box C/D snoRNA, acts as a tumor suppressor in glioblastoma.
Chen L, Han L, Wei J, Zhang K, Shi Z, Duan R, Li S, Zhou X, Pu P, Zhang J, Kang C. Chen L, et al. Sci Rep. 2015 Feb 26;5:8588. doi: 10.1038/srep08588. Sci Rep. 2015. PMID: 25715874 Free PMC article. - Saccharomyces cerevisiae Sof1p associates with 35S Pre-rRNA independent from U3 snoRNA and Rrp5p.
Bax R, Vos HR, Raué HA, Vos JC. Bax R, et al. Eukaryot Cell. 2006 Mar;5(3):427-34. doi: 10.1128/EC.5.3.427-434.2006. Eukaryot Cell. 2006. PMID: 16524898 Free PMC article.
References
- Agris P.F. (1996) The importance of being modified: roles of modified nucleosides and Mg2+ in RNA structure and function. Prog. Nucleic Acid Res. Mol. Biol., 53, 79–129. - PubMed
- Bachellerie J.-P., Michot,B., Nicoloso,M., Balakin,A., Ni,J. and Fournier, M.J. (1995) Antisense snoRNAs: a family of nucleolar RNAs with long complementarity to rRNA. Trends Biochem. Sci., 20, 261–264. - PubMed
- Balakin A.G., Smith,L. and Fournier,M.J. (1996) The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions. Cell, 86, 823–834. - PubMed
- Bohmann K., Ferreira,J., Santama,N., Weis,K. and Lamond,A.I. (1995) Molecular analysis of coiled body. J. Cell Sci., 19, 107–113. - PubMed
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources