Genomic and genetic definition of a functional human centromere - PubMed (original) (raw)
. 2001 Oct 5;294(5540):109-15.
doi: 10.1126/science.1065042.
Affiliations
- PMID: 11588252
- DOI: 10.1126/science.1065042
Genomic and genetic definition of a functional human centromere
M G Schueler et al. Science. 2001.
Abstract
The definition of centromeres of human chromosomes requires a complete genomic understanding of these regions. Toward this end, we report integration of physical mapping, genetic, and functional approaches, together with sequencing of selected regions, to define the centromere of the human X chromosome and to explore the evolution of sequences responsible for chromosome segregation. The transitional region between expressed sequences on the short arm of the X and the chromosome-specific alpha satellite array DXZ1 spans about 450 kilobases and is satellite-rich. At the junction between this satellite region and canonical DXZ1 repeats, diverged repeat units provide direct evidence of unequal crossover as the homogenizing force of these arrays. Results from deletion analysis of mitotically stable chromosome rearrangements and from a human artificial chromosome assay demonstrate that DXZ1 DNA is sufficient for centromere function. Evolutionary studies indicate that, while alpha satellite DNA present throughout the pericentromeric region of the X chromosome appears to be a descendant of an ancestral primate centromere, the current functional centromere based on DXZ1 sequences is the product of the much more recent concerted evolution of this satellite DNA.
Comment in
- Genetics. Closing in on the centromere.
Pennisi E. Pennisi E. Science. 2001 Oct 5;294(5540):30-1. doi: 10.1126/science.294.5540.30. Science. 2001. PMID: 11588227 No abstract available.
Similar articles
- Progressive proximal expansion of the primate X chromosome centromere.
Schueler MG, Dunn JM, Bird CP, Ross MT, Viggiano L; NISC Comparative Sequencing Program; Rocchi M, Willard HF, Green ED. Schueler MG, et al. Proc Natl Acad Sci U S A. 2005 Jul 26;102(30):10563-8. doi: 10.1073/pnas.0503346102. Epub 2005 Jul 19. Proc Natl Acad Sci U S A. 2005. PMID: 16030148 Free PMC article. - Genetics. Closing in on the centromere.
Pennisi E. Pennisi E. Science. 2001 Oct 5;294(5540):30-1. doi: 10.1126/science.294.5540.30. Science. 2001. PMID: 11588227 No abstract available. - Clusters of alpha satellite on human chromosome 21 are dispersed far onto the short arm and lack ancient layers.
Ziccardi W, Zhao C, Shepelev V, Uralsky L, Alexandrov I, Andreeva T, Rogaev E, Bun C, Miller E, Putonti C, Doering J. Ziccardi W, et al. Chromosome Res. 2016 Sep;24(3):421-36. doi: 10.1007/s10577-016-9530-z. Epub 2016 Jul 18. Chromosome Res. 2016. PMID: 27430641 - Neocentromeres and alpha satellite: a proposed structural code for functional human centromere DNA.
Koch J. Koch J. Hum Mol Genet. 2000 Jan 22;9(2):149-54. doi: 10.1093/hmg/9.2.149. Hum Mol Genet. 2000. PMID: 10607825 Review. - The centromere paradox: stable inheritance with rapidly evolving DNA.
Henikoff S, Ahmad K, Malik HS. Henikoff S, et al. Science. 2001 Aug 10;293(5532):1098-102. doi: 10.1126/science.1062939. Science. 2001. PMID: 11498581 Review.
Cited by
- Conserved DNA Motifs, Including the CENP-B Box-like, Are Possible Promoters of Satellite DNA Array Rearrangements in Nematodes.
Meštrović N, Pavlek M, Car A, Castagnone-Sereno P, Abad P, Plohl M. Meštrović N, et al. PLoS One. 2013 Jun 27;8(6):e67328. doi: 10.1371/journal.pone.0067328. Print 2013. PLoS One. 2013. PMID: 23826269 Free PMC article. - DNA satellite and chromatin organization at mouse centromeres and pericentromeres.
Packiaraj J, Thakur J. Packiaraj J, et al. Genome Biol. 2024 Feb 20;25(1):52. doi: 10.1186/s13059-024-03184-z. Genome Biol. 2024. PMID: 38378611 Free PMC article. - The mouse DXZ4 homolog retains Ctcf binding and proximity to Pls3 despite substantial organizational differences compared to the primate macrosatellite.
Horakova AH, Calabrese JM, McLaughlin CR, Tremblay DC, Magnuson T, Chadwick BP. Horakova AH, et al. Genome Biol. 2012 Aug 20;13(8):R70. doi: 10.1186/gb-2012-13-8-r70. Genome Biol. 2012. PMID: 22906166 Free PMC article. - Transposons play an important role in the evolution and diversification of centromeres among closely related species.
Gao D, Jiang N, Wing RA, Jiang J, Jackson SA. Gao D, et al. Front Plant Sci. 2015 Apr 7;6:216. doi: 10.3389/fpls.2015.00216. eCollection 2015. Front Plant Sci. 2015. PMID: 25904926 Free PMC article. - Rapid generation of long synthetic tandem repeats and its application for analysis in human artificial chromosome formation.
Ebersole T, Okamoto Y, Noskov VN, Kouprina N, Kim JH, Leem SH, Barrett JC, Masumoto H, Larionov V. Ebersole T, et al. Nucleic Acids Res. 2005 Sep 1;33(15):e130. doi: 10.1093/nar/gni129. Nucleic Acids Res. 2005. PMID: 16141190 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources