Life before the clock: modeling circadian evolution - PubMed (original) (raw)
Life before the clock: modeling circadian evolution
Till Roenneberg et al. J Biol Rhythms. 2002 Dec.
Abstract
A feedback loop that functions via transcription and translation is thought to be the mechanistic core of circadian rhythmicity. Numerous modeling efforts incorporate the identified components and their modifications to recreate the circadian clock in computer simulations. Several issues remain problematic, including the lack of precise quantitative kinetics and the likely existence of additional, as-yet-undiscovered components. Even without these complications, models and flow charts of the circadian system have reached high complexity. They attempt to reconcile all observations without violating current views and concepts. In this article, the authors consider the mechanisms that may have preceded the circadian system in evolution. Given that cellular metabolism and biochemistry were presumably already interconnected in cascading feedback reactions prior to the appendage of the transcription/translation feedback loop, a coordinated response to exogenous changes would be advantageous over unsystematic responses. The authors hypothesize that those mechanisms that allowed synchronization in spite of metabolic complexity form the basis for the evolution of circadian properties and are as fundamental to the circadian system as the transcriptional/translational feedback loop.
Similar articles
- Transcriptional and post-transcriptional regulation of the circadian clock of cyanobacteria and Neurospora.
Brunner M, Schafmeier T. Brunner M, et al. Genes Dev. 2006 May 1;20(9):1061-74. doi: 10.1101/gad.1410406. Genes Dev. 2006. PMID: 16651653 Review. - [Synchronization and genetic redundancy in circadian clocks].
Dardente H. Dardente H. Med Sci (Paris). 2008 Mar;24(3):270-6. doi: 10.1051/medsci/2008243270. Med Sci (Paris). 2008. PMID: 18334175 Review. French. - Transcriptional feedback oscillators: maybe, maybe not..
Lakin-Thomas PL. Lakin-Thomas PL. J Biol Rhythms. 2006 Apr;21(2):83-92. doi: 10.1177/0748730405286102. J Biol Rhythms. 2006. PMID: 16603673 Review. - Molecular regulation of circadian rhythms in Drosophila and mammals.
Meyer-Bernstein EL, Sehgal A. Meyer-Bernstein EL, et al. Neuroscientist. 2001 Dec;7(6):496-505. doi: 10.1177/107385840100700606. Neuroscientist. 2001. PMID: 11765127 Review. - Circadian clocks during embryonic and fetal development.
Seron-Ferre M, Valenzuela GJ, Torres-Farfan C. Seron-Ferre M, et al. Birth Defects Res C Embryo Today. 2007 Sep;81(3):204-14. doi: 10.1002/bdrc.20101. Birth Defects Res C Embryo Today. 2007. PMID: 17963275 Review.
Cited by
- Extension of a genetic network model by iterative experimentation and mathematical analysis.
Locke JC, Southern MM, Kozma-Bognár L, Hibberd V, Brown PE, Turner MS, Millar AJ. Locke JC, et al. Mol Syst Biol. 2005;1:2005.0013. doi: 10.1038/msb4100018. Epub 2005 Jun 28. Mol Syst Biol. 2005. PMID: 16729048 Free PMC article. - Evolution of KaiC-Dependent Timekeepers: A Proto-circadian Timing Mechanism Confers Adaptive Fitness in the Purple Bacterium Rhodopseudomonas palustris.
Ma P, Mori T, Zhao C, Thiel T, Johnson CH. Ma P, et al. PLoS Genet. 2016 Mar 16;12(3):e1005922. doi: 10.1371/journal.pgen.1005922. eCollection 2016 Mar. PLoS Genet. 2016. PMID: 26982486 Free PMC article. - Timing the day: what makes bacterial clocks tick?
Johnson CH, Zhao C, Xu Y, Mori T. Johnson CH, et al. Nat Rev Microbiol. 2017 Apr;15(4):232-242. doi: 10.1038/nrmicro.2016.196. Epub 2017 Feb 20. Nat Rev Microbiol. 2017. PMID: 28216658 Free PMC article. Review. - Reciprocal Control of the Circadian Clock and Cellular Redox State - a Critical Appraisal.
Putker M, O'Neill JS. Putker M, et al. Mol Cells. 2016 Jan;39(1):6-19. doi: 10.14348/molcells.2016.2323. Epub 2016 Jan 25. Mol Cells. 2016. PMID: 26810072 Free PMC article. Review. - Chronotypes in the US - Influence of age and sex.
Fischer D, Lombardi DA, Marucci-Wellman H, Roenneberg T. Fischer D, et al. PLoS One. 2017 Jun 21;12(6):e0178782. doi: 10.1371/journal.pone.0178782. eCollection 2017. PLoS One. 2017. PMID: 28636610 Free PMC article.
Publication types
MeSH terms
LinkOut - more resources
Full Text Sources