Analysis of chromosome 21 yeast artificial chromosome (YAC) clones - PubMed (original) (raw)
. 1992 Dec;51(6):1251-64.
Affiliations
- PMID: 1463009
- PMCID: PMC1682922
Analysis of chromosome 21 yeast artificial chromosome (YAC) clones
F Tassone et al. Am J Hum Genet. 1992 Dec.
Abstract
Chromosome 21 contains genes relevant to several important diseases. Yeast artificial chromosome (YAC) clones, because they span > 100 kbp, will provide attractive material for initiating searches for such genes. Twenty-two YAC clones, each of which maps to a region of potential relevance either to aspects of the Down syndrome phenotype or to one of the other chromosome 21-associated genetic diseases, have been analyzed in detail. Clones total approximately 6,000 kb and derive from all parts of the long arm. Rare restriction-site maps have been constructed for each clone and have been used to determine regional variations in clonability, methylation frequency, CpG island density, and CpG island frequency versus gene density. This information will be useful for the isolation and mapping of new genes to chromosome 21 and for walking in YAC libraries.
Similar articles
- Walking, cloning, and mapping with yeast artificial chromosomes: a contig encompassing D21S13 and D21S16.
Butler R, Ogilvie DJ, Elvin P, Riley JH, Finniear RS, Slynn G, Morten JE, Markham AF, Anand R. Butler R, et al. Genomics. 1992 Jan;12(1):42-51. doi: 10.1016/0888-7543(92)90404-g. Genomics. 1992. PMID: 1733862 - Use of yeast artificial chromosome clones for mapping and walking within human chromosome segment 18q21.3.
Silverman GA, Ye RD, Pollock KM, Sadler JE, Korsmeyer SJ. Silverman GA, et al. Proc Natl Acad Sci U S A. 1989 Oct;86(19):7485-9. doi: 10.1073/pnas.86.19.7485. Proc Natl Acad Sci U S A. 1989. PMID: 2678105 Free PMC article. - 3.6-Mb genomic and YAC physical map of the Down syndrome chromosome region on chromosome 21.
Dufresne-Zacharia MC, Dahmane N, Theophile D, Orti R, Chettouh Z, Sinet PM, Delabar JM. Dufresne-Zacharia MC, et al. Genomics. 1994 Feb;19(3):462-9. doi: 10.1006/geno.1994.1095. Genomics. 1994. PMID: 8188288 - Characterization of yeast artificial chromosomes containing interleukin genes on human chromosome 5.
Stock W, Chandrasekharappa SC, Neuman WL, Le Beau MM, Brownstein BH, Westbrook CA. Stock W, et al. Cytogenet Cell Genet. 1992;61(4):263-5. doi: 10.1159/000133417. Cytogenet Cell Genet. 1992. PMID: 1486800 - The role of yeast artificial chromosome clones in generating genome maps.
Burke DT. Burke DT. Curr Opin Genet Dev. 1991 Jun;1(1):69-74. doi: 10.1016/0959-437x(91)80044-m. Curr Opin Genet Dev. 1991. PMID: 1840880 Review.
Cited by
- YAC clones targeting gene-rich regions of human chromosome 3.
Williams RF, Pekarsky Y, Cheng S, Gardiner K. Williams RF, et al. Mamm Genome. 1994 Jun;5(6):380-3. doi: 10.1007/BF00356559. Mamm Genome. 1994. PMID: 8043955 No abstract available. - The role of SON in splicing, development, and disease.
Lu X, Ng HH, Bubulya PA. Lu X, et al. Wiley Interdiscip Rev RNA. 2014 Sep-Oct;5(5):637-46. doi: 10.1002/wrna.1235. Epub 2014 Apr 30. Wiley Interdiscip Rev RNA. 2014. PMID: 24789761 Free PMC article. Review. - GART, SON, IFNAR, and CRF2-4 genes cluster on human chromosome 21 and mouse chromosome 16.
Cheng S, Lutfalla G, Uze G, Chumakov IM, Gardiner K. Cheng S, et al. Mamm Genome. 1993;4(6):338-42. doi: 10.1007/BF00357094. Mamm Genome. 1993. PMID: 8318737 No abstract available. - Random-breakage mapping method applied to human DNA sequences.
Löbrich M, Rydberg B, Cooper PK. Löbrich M, et al. Nucleic Acids Res. 1996 May 15;24(10):1802-8. doi: 10.1093/nar/24.10.1802. Nucleic Acids Res. 1996. PMID: 8657558 Free PMC article. - A long-range physical map of human chromosome 21q22.1 band from the YAC continuum.
Eki T, Abe M, Furuya K, Ahmad I, Fujishima N, Kishida H, Shiratori A, Onozaki T, Yokoyama K, Le Paslier D, Cohen D, Hanaoka F, Murakami Y. Eki T, et al. Mamm Genome. 1996 Apr;7(4):303-11. doi: 10.1007/s003359900087. Mamm Genome. 1996. PMID: 8661703
References
- Am J Hum Genet. 1990 Feb;46(2):316-22 - PubMed
- Genomics. 1990 Oct;8(2):297-303 - PubMed
- Nature. 1986 May 15-21;321(6067):209-13 - PubMed
- Genomics. 1989 Aug;5(2):325-31 - PubMed
- Proc Natl Acad Sci U S A. 1989 Sep;86(17):6686-90 - PubMed
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Molecular Biology Databases