Randomization of genes by PCR mutagenesis - PubMed (original) (raw)
Randomization of genes by PCR mutagenesis
R C Cadwell et al. PCR Methods Appl. 1992 Aug.
Free article
Abstract
A modified polymerase chain reaction (PCR) was developed to introduce random point mutations into cloned genes. The modifications were made to decrease the fidelity of Taq polymerase during DNA synthesis without significantly decreasing the level of amplification achieved in the PCR. The resulting PCR products can be cloned to produce random mutant libraries or transcribed directly if a T7 promoter is incorporated within the appropriate PCR primer. We used this method to mutagenize the gene that encodes the Tetrahymena ribozyme with a mutation rate of 0.66% +/- 0.13% (95% C.I.) per position per PCR, as determined by sequence analysis. There are no strong preferneces with respect to the type of base substituion. The number of mutations per DNA sequence follows a Poisson distribution and the mutations are randomly distributed throughout the amplified sequence.
Similar articles
- Combining localized PCR mutagenesis and natural transformation in direct genetic analysis of a transcriptional regulator gene, pobR.
Kok RG, D'Argenio DA, Ornston LN. Kok RG, et al. J Bacteriol. 1997 Jul;179(13):4270-6. doi: 10.1128/jb.179.13.4270-4276.1997. J Bacteriol. 1997. PMID: 9209043 Free PMC article. - Creating random mutagenesis libraries using megaprimer PCR of whole plasmid.
Miyazaki K, Takenouchi M. Miyazaki K, et al. Biotechniques. 2002 Nov;33(5):1033-4, 1036-8. doi: 10.2144/02335st03. Biotechniques. 2002. PMID: 12449380 - Saturation mutagenesis by mutagenic oligonucleotide-directed PCR amplification (Mod-PCR).
Chiang LW. Chiang LW. Methods Mol Biol. 1996;57:311-21. doi: 10.1385/0-89603-332-5:311. Methods Mol Biol. 1996. PMID: 8850017 Review. No abstract available. - Site-directed mutagenesis in vitro by megaprimer PCR.
Barik S. Barik S. Methods Mol Biol. 1996;57:203-15. doi: 10.1385/0-89603-332-5:203. Methods Mol Biol. 1996. PMID: 8850007 Review. No abstract available.
Cited by
- A PCR-free rapid protocol for one-pot construction of highly diverse genetic libraries.
Woolley M, Chen Z. Woolley M, et al. PLoS One. 2022 Oct 31;17(10):e0276338. doi: 10.1371/journal.pone.0276338. eCollection 2022. PLoS One. 2022. PMID: 36315516 Free PMC article. - From polymerase engineering to semi-synthetic life: artificial expansion of the central dogma.
Sun L, Ma X, Zhang B, Qin Y, Ma J, Du Y, Chen T. Sun L, et al. RSC Chem Biol. 2022 Aug 9;3(10):1173-1197. doi: 10.1039/d2cb00116k. eCollection 2022 Oct 5. RSC Chem Biol. 2022. PMID: 36320892 Free PMC article. Review. - Direct activation of a bacterial innate immune system by a viral capsid protein.
Zhang T, Tamman H, Coppieters 't Wallant K, Kurata T, LeRoux M, Srikant S, Brodiazhenko T, Cepauskas A, Talavera A, Martens C, Atkinson GC, Hauryliuk V, Garcia-Pino A, Laub MT. Zhang T, et al. Nature. 2022 Dec;612(7938):132-140. doi: 10.1038/s41586-022-05444-z. Epub 2022 Nov 16. Nature. 2022. PMID: 36385533 Free PMC article. - An adenine base editor variant expands context compatibility.
Xiao YL, Wu Y, Tang W. Xiao YL, et al. Nat Biotechnol. 2024 Sep;42(9):1442-1453. doi: 10.1038/s41587-023-01994-3. Epub 2024 Jan 2. Nat Biotechnol. 2024. PMID: 38168987 - A yeast two-hybrid approach for probing protein-protein interactions at the centrosome.
Galletta BJ, Rusan NM. Galletta BJ, et al. Methods Cell Biol. 2015;129:251-277. doi: 10.1016/bs.mcb.2015.03.012. Epub 2015 May 27. Methods Cell Biol. 2015. PMID: 26175443 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources