A quantitative protein interaction network for the ErbB receptors using protein microarrays - PubMed (original) (raw)
. 2006 Jan 12;439(7073):168-74.
doi: 10.1038/nature04177. Epub 2005 Nov 6.
Affiliations
- PMID: 16273093
- DOI: 10.1038/nature04177
A quantitative protein interaction network for the ErbB receptors using protein microarrays
Richard B Jones et al. Nature. 2006.
Abstract
Although epidermal growth factor receptor (EGFR; also called ErbB1) and its relatives initiate one of the most well-studied signalling networks, there is not yet a genome-wide view of even the earliest step in this pathway: recruitment of proteins to the activated receptors. Here we use protein microarrays comprising virtually every Src homology 2 (SH2) and phosphotyrosine binding (PTB) domain encoded in the human genome to measure the equilibrium dissociation constant of each domain for 61 peptides representing physiological sites of tyrosine phosphorylation on the four ErbB receptors. This involved 77,592 independent biochemical measurements and provided a quantitative protein interaction network that reveals many new interactions, including ones that fall outside of our current view of domain selectivity. By slicing through the network at different affinity thresholds, we found surprising differences between the receptors. Most notably, EGFR and ErbB2 become markedly more promiscuous as the threshold is lowered, whereas ErbB3 does not. Because EGFR and ErbB2 are overexpressed in many human cancers, our results suggest that the extent to which promiscuity changes with protein concentration may contribute to the oncogenic potential of receptor tyrosine kinases, and perhaps other signalling proteins as well.
Similar articles
- Phosphorylation of Thr654 but not Thr669 within the juxtamembrane domain of the EGF receptor inhibits calmodulin binding.
Aifa S, Frikha F, Miled N, Johansen K, Lundström I, Svensson SP. Aifa S, et al. Biochem Biophys Res Commun. 2006 Aug 25;347(2):381-7. doi: 10.1016/j.bbrc.2006.05.200. Epub 2006 Jun 9. Biochem Biophys Res Commun. 2006. PMID: 16793002 - Solution structure of the human Grb14-SH2 domain and comparison with the structures of the human Grb7-SH2/erbB2 peptide complex and human Grb10-SH2 domain.
Scharf PJ, Witney J, Daly R, Lyons BA. Scharf PJ, et al. Protein Sci. 2004 Sep;13(9):2541-6. doi: 10.1110/ps.04884704. Protein Sci. 2004. PMID: 15322292 Free PMC article. - Comprehensive binary interaction mapping of SH2 domains via fluorescence polarization reveals novel functional diversification of ErbB receptors.
Hause RJ Jr, Leung KK, Barkinge JL, Ciaccio MF, Chuu CP, Jones RB. Hause RJ Jr, et al. PLoS One. 2012;7(9):e44471. doi: 10.1371/journal.pone.0044471. Epub 2012 Sep 4. PLoS One. 2012. PMID: 22973453 Free PMC article. - Epidermal growth factor receptor (EGFR) signaling in cancer.
Normanno N, De Luca A, Bianco C, Strizzi L, Mancino M, Maiello MR, Carotenuto A, De Feo G, Caponigro F, Salomon DS. Normanno N, et al. Gene. 2006 Jan 17;366(1):2-16. doi: 10.1016/j.gene.2005.10.018. Epub 2005 Dec 27. Gene. 2006. PMID: 16377102 Review. - Lessons from nature: On the molecular recognition elements of the phosphoprotein binding-domains.
Roque AC, Lowe CR. Roque AC, et al. Biotechnol Bioeng. 2005 Sep 5;91(5):546-55. doi: 10.1002/bit.20561. Biotechnol Bioeng. 2005. PMID: 15959902 Review.
Cited by
- Nrg1β Released in Remote Ischemic Preconditioning Improves Myocardial Perfusion and Decreases Ischemia/Reperfusion Injury via ErbB2-Mediated Rescue of Endothelial Nitric Oxide Synthase and Abrogation of Trx2 Autophagy.
Kundumani-Sridharan V, Subramani J, Owens C, Das KC. Kundumani-Sridharan V, et al. Arterioscler Thromb Vasc Biol. 2021 Aug;41(8):2293-2314. doi: 10.1161/ATVBAHA.121.315957. Epub 2021 May 27. Arterioscler Thromb Vasc Biol. 2021. PMID: 34039018 Free PMC article. - The SH2 domain interaction landscape.
Tinti M, Kiemer L, Costa S, Miller ML, Sacco F, Olsen JV, Carducci M, Paoluzi S, Langone F, Workman CT, Blom N, Machida K, Thompson CM, Schutkowski M, Brunak S, Mann M, Mayer BJ, Castagnoli L, Cesareni G. Tinti M, et al. Cell Rep. 2013 Apr 25;3(4):1293-305. doi: 10.1016/j.celrep.2013.03.001. Epub 2013 Mar 28. Cell Rep. 2013. PMID: 23545499 Free PMC article. - Ultrasensitive interferometric on-chip microscopy of transparent objects.
Terborg RA, Pello J, Mannelli I, Torres JP, Pruneri V. Terborg RA, et al. Sci Adv. 2016 Jun 10;2(6):e1600077. doi: 10.1126/sciadv.1600077. eCollection 2016 Jun. Sci Adv. 2016. PMID: 27386571 Free PMC article. - Analysis of protein sequence and interaction data for candidate disease gene prediction.
George RA, Liu JY, Feng LL, Bryson-Richardson RJ, Fatkin D, Wouters MA. George RA, et al. Nucleic Acids Res. 2006;34(19):e130. doi: 10.1093/nar/gkl707. Epub 2006 Oct 4. Nucleic Acids Res. 2006. PMID: 17020920 Free PMC article. - High-throughput profiling of sequence recognition by tyrosine kinases and SH2 domains using bacterial peptide display.
Li A, Voleti R, Lee M, Gagoski D, Shah NH. Li A, et al. Elife. 2023 Mar 16;12:e82345. doi: 10.7554/eLife.82345. Elife. 2023. PMID: 36927728 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases
Research Materials
Miscellaneous