Classification of methanogenic bacteria by 16S ribosomal RNA characterization - PubMed (original) (raw)

Classification of methanogenic bacteria by 16S ribosomal RNA characterization

G E Fox et al. Proc Natl Acad Sci U S A. 1977 Oct.

Abstract

The 16S ribosomal RNAs from 10 species of methanogenic bacteria have been characterized in terms of the oligonucleotides produced by T(1) RNase digestion. Comparative analysis of these data reveals the methanogens to constitute a distinct phylogenetic group containing two major divisions. These organisms appear to be only distantly related to typical bacteria.

PubMed Disclaimer

Similar articles

• An ancient divergence among the bacteria.
  Balch WE, Magrum LJ, Fox GE, Wolfe RS, Woese CR. Balch WE, et al. J Mol Evol. 1977 Aug 5;9(4):305-11. doi: 10.1007/BF01796092. J Mol Evol. 1977. PMID: 408502
• Characterization of the methanogenic Archaea within two-phase biogas reactor systems operated with plant biomass.
  Klocke M, Nettmann E, Bergmann I, Mundt K, Souidi K, Mumme J, Linke B. Klocke M, et al. Syst Appl Microbiol. 2008 Aug;31(3):190-205. doi: 10.1016/j.syapm.2008.02.003. Epub 2008 May 22. Syst Appl Microbiol. 2008. PMID: 18501543
• Methanohalophilus zhilinae sp. nov., an alkaliphilic, halophilic, methylotrophic methanogen.
  Mathrani IM, Boone DR, Mah RA, Fox GE, Lau PP. Mathrani IM, et al. Int J Syst Bacteriol. 1988 Apr;38(2):139-42. doi: 10.1099/00207713-38-2-139. Int J Syst Bacteriol. 1988. PMID: 11540079
• [Actual problems of bacteria phylogenetic classification].
  Romanovskaia VA, Rokitko PV, Shilin SO, Malashenko IuR. Romanovskaia VA, et al. Mikrobiol Z. 2003 Sep-Oct;65(5):46-65. Mikrobiol Z. 2003. PMID: 14723163 Review. Russian.
• Ecology and characteristics of methanogenic archaea in animals and humans.
  Saengkerdsub S, Ricke SC. Saengkerdsub S, et al. Crit Rev Microbiol. 2014 May;40(2):97-116. doi: 10.3109/1040841X.2013.763220. Epub 2013 Feb 21. Crit Rev Microbiol. 2014. PMID: 23425063 Review.

Cited by

• A reminder-peptidoglycan cell walls indeed occur in the archaeal domain, specifically in the members of Methanobacteria and Methanopyri classes.
  Mukhopadhyay B. Mukhopadhyay B. Front Microbiol. 2024 May 9;15:1329047. doi: 10.3389/fmicb.2024.1329047. eCollection 2024. Front Microbiol. 2024. PMID: 38784805 Free PMC article. No abstract available.
• The discovery of archaea: from observed anomaly to consequential restructuring of the phylogenetic tree.
  Fry M. Fry M. Hist Philos Life Sci. 2024 Mar 26;46(2):16. doi: 10.1007/s40656-024-00616-8. Hist Philos Life Sci. 2024. PMID: 38530473 Free PMC article.
• Functional prediction of proteins from the human gut archaeome.
  Novikova PV, Bhanu Busi S, Probst AJ, May P, Wilmes P. Novikova PV, et al. ISME Commun. 2024 Jan 10;4(1):ycad014. doi: 10.1093/ismeco/ycad014. eCollection 2024 Jan. ISME Commun. 2024. PMID: 38486809 Free PMC article.
• Speciation, natural selection, and networks: three historians versus theoretical population geneticists.
  Forsdyke DR. Forsdyke DR. Theory Biosci. 2024 Feb;143(1):1-26. doi: 10.1007/s12064-024-00412-9. Epub 2024 Jan 29. Theory Biosci. 2024. PMID: 38282046 Review.
• RESCUE: a validated Nanopore pipeline to classify bacteria through long-read, 16S-ITS-23S rRNA sequencing.
  Petrone JR, Rios Glusberger P, George CD, Milletich PL, Ahrens AP, Roesch LFW, Triplett EW. Petrone JR, et al. Front Microbiol. 2023 Jul 20;14:1201064. doi: 10.3389/fmicb.2023.1201064. eCollection 2023. Front Microbiol. 2023. PMID: 37547696 Free PMC article.

References

1. 1. J Biol Chem. 1963 Aug;238:2882-6 - PubMed
2. 1. Nature. 1975 Mar 6;254(5495):83-6 - PubMed
3. 1. Bacteriol Rev. 1977 Jun;41(2):514-41 - PubMed
4. 1. Antonie Van Leeuwenhoek. 1975;41(4):543-52 - PubMed
5. 1. J Theor Biol. 1965 Mar;8(2):357-66 - PubMed

LinkOut - more resources

• Full Text Sources

  • Atypon
  • Europe PubMed Central
  • PubMed Central

• Other Literature Sources

  • The Lens - Patent Citations Database