In vitro selection and characterization of ceftobiprole-resistant methicillin-resistant Staphylococcus aureus - PubMed (original) (raw)
In vitro selection and characterization of ceftobiprole-resistant methicillin-resistant Staphylococcus aureus
Ritu Banerjee et al. Antimicrob Agents Chemother. 2008 Jun.
Abstract
Methicillin-resistant Staphylococcus aureus (MRSA) is resistant to beta-lactam antibiotics because it expresses penicillin-binding protein 2a (PBP2a), a low-affinity penicillin-binding protein. An investigational broad-spectrum cephalosporin, ceftobiprole (BPR), binds PBP2a with high affinity and is active against MRSA. We hypothesized that BPR resistance could be mediated by mutations in mecA, the gene encoding PBP2a. We selected BPR-resistant mutants by passage in high-volume broth cultures containing subinhibitory concentrations of BPR. We used strain COLnex (which lacks chromosomal mecA) transformed with pAW8 (a plasmid vector only), pYK20 (a plasmid carrying wild-type mecA), or pYK21 (a plasmid carrying a mutant mecA gene corresponding to five PBP2a mutations). All strains became resistant to BPR by day 9 of passaging, but MICs continued to increase until day 21. MICs increased 256-fold (from 1 to 256 microg/ml) for pAW8, 32-fold (from 4 to 128 microg/ml) for pYK20, and 8-fold (from 16 to 128 mug/ml) for pYK21. Strains carrying wild-type or mutant mecA developed six (pYK20 transformants) or four (pYK21 transformants) new mutations in mecA. The transformation of COLnex with a mecA mutant plasmid conferred BPR resistance, and the loss of mecA converted resistant strains into susceptible ones. Modeling studies predicted that several of the mecA mutations altered BPR binding; other mutations may have mediated resistance by influencing interactions with other proteins. Multiple mecA mutations were associated with BPR resistance in MRSA. BPR resistance also developed in the strain lacking mecA, suggesting a role for chromosomal genes.
Figures
FIG. 1.
BPR resistance developed in multiple steps during the serial passage of strains COLnex(pAW8) (filled squares), COLnex(pYK20) (filled triangles), and COLnex(pYK21) (open circles). The highest BPR concentration in which strains grew each day is shown on the y axis. The inset is a close-up view of results from the first 2 weeks of passaging. The dashed line represents the preliminary BPR breakpoint of 4 μg/ml.
FIG. 2.
Population analyses showing BPR susceptibilities of prepassage strains [filled squares, COLnex(pAW8); filled triangles, COLnex(pYK20); and filled circles, COLnex(pYK21)] and strains passaged in BPR for 28 days [open squares, COLnex(pAW8)D28; open triangles, COLnex(pYK20)D28; and open circles, COLnex(pYK21)D28]. The y axis indicates the number of cells (expressed as the log10 number of CFU per milliliter) growing on BPR-containing agar.
FIG. 3.
Growth curves of strains before and after BPR passage. Filled squares, COLnex(pAW8); open squares, COLnex(pAW8)D28; filled triangles, COLnex(pYK20); open triangles, COLnex(pYK20)D28; filled circles, COLnex(pYK21); and open circles COLnex(pYK21)D28. OD578, optical density at 578 nm.
FIG. 4.
Schematic of PBP2a and amino acid substitutions in BPR-passaged strains containing plasmid-carried mecA, COLnex(pYK20) and COLnex(pYK21). The day of serial passage and the corresponding amino acid changes identified are shown. In the schematic, vertical black lines indicate three penicillin-binding motifs, the arrowhead denotes a transmembrane anchor, the speckled region denotes the non-penicillin-binding domain (nonPBD), and the diagonally striped region denotes the transpeptidase domain. Underlined amino acid substitutions arose independently in derivatives of both COLnex(pYK20) and COLnex(pYK21). D0, D13, D15, and D28, days 0, 13, 15, and 28.
FIG. 5.
(A) Population analyses of COLnex transformed with plasmids derived from BPR-passaged strains: COLnex(pAW8)T (filled squares), COLnex(pYK20)T (filled triangles), and COLnex(pYK21)T (open circles). The y axis indicates the number of cells (expressed as the log10 number of CFU per milliliter) growing on BPR-containing agar. (B) Population analyses of BPR-resistant strains cured of plasmid by passage in the absence of tetracycline: COLnex(pAW8)c (filled squares), COLnex(pYK20)c (filled triangles), and COLnex(pYK21)c (open circles). The y axis indicates the number of cells (expressed as the log10 number of CFU per milliliter) growing on BPR-containing agar.
FIG. 6.
Structural perspectives of BPR-resistant PBP2a mutant forms. (A and B) Molecular modeling of mutant forms of PBP2a bound to the cephalosporin nitrocefin showing nitrocefin in blue (cephalosporin core structure), orange (variable group R1), and green (group R2); the native protein backbone and residues in gray; residues subject to mutation in cyan (native residue) and purple (corresponding mutant residue); and noncarbon atoms in CPK. (A) Group 1 mutations (F467Y, V470E, and I563T) likely affect BPR binding by perturbing helix α2 (shown as a yellow ribbon) by introducing adjacent polar or charged groups into the hydrophobic interior of PBP2a. (B) Group 2 substitutions probably lower BPR-binding affinity by directly affecting the PBP2a active site. These substitutions include Y446L, predicted to disrupt van der Waals contacts and pi bond stacking (π-π) interactions between PBP2a and conjugated double-bond systems of cephalosporin R2 groups; E447K, which may interact electrostatically with E460 to reposition Y446; S649A, predicted to destabilize the alpha helix bearing M641 that interacts with aromatic or hydrophobic R2 groups; and S643N, which may alter the polarity at the active-site entrance. (C) APBS modeling of PBP2a surface charge potential shows native residues E150 and E239 located within an extended swath of negative charge in the putative dimerization domain (the APBS surface is colored blue, white, and red, corresponding to values of +15, 0, and −15 kT/e, respectively, with shading by linear interpolation). Each of these residues is mutated, respectively, in pYK20 and pYK21, possibly contributing to BPR resistance by influencing protein-protein interactions.
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