Substrate-assisted catalysis by PARP10 limits its activity to mono-ADP-ribosylation - PubMed (original) (raw)
Substrate-assisted catalysis by PARP10 limits its activity to mono-ADP-ribosylation
Henning Kleine et al. Mol Cell. 2008.
Free article
Abstract
ADP-ribosylation controls many processes, including transcription, DNA repair, and bacterial toxicity. ADP-ribosyltransferases and poly-ADP-ribose polymerases (PARPs) catalyze mono- and poly-ADP-ribosylation, respectively, and depend on a highly conserved glutamate residue in the active center for catalysis. However, there is an apparent absence of this glutamate for the recently described PARP6-PARP16, raising questions about how these enzymes function. We find that PARP10, in contrast to PARP1, lacks the catalytic glutamate and has transferase rather than polymerase activity. Despite this fundamental difference, PARP10 also modifies acidic residues. Consequently, we propose an alternative catalytic mechanism for PARP10 compared to PARP1 in which the acidic target residue of the substrate functionally substitutes for the catalytic glutamate by using substrate-assisted catalysis to transfer ADP-ribose. This mechanism explains why the novel PARPs are unable to function as polymerases. This discovery will help to illuminate the different biological functions of mono- versus poly-ADP-ribosylation in cells.
Similar articles
- The conserved macrodomains of the non-structural proteins of Chikungunya virus and other pathogenic positive strand RNA viruses function as mono-ADP-ribosylhydrolases.
Eckei L, Krieg S, Bütepage M, Lehmann A, Gross A, Lippok B, Grimm AR, Kümmerer BM, Rossetti G, Lüscher B, Verheugd P. Eckei L, et al. Sci Rep. 2017 Feb 2;7:41746. doi: 10.1038/srep41746. Sci Rep. 2017. PMID: 28150709 Free PMC article. - ENPP1 processes protein ADP-ribosylation in vitro.
Palazzo L, Daniels CM, Nettleship JE, Rahman N, McPherson RL, Ong SE, Kato K, Nureki O, Leung AK, Ahel I. Palazzo L, et al. FEBS J. 2016 Sep;283(18):3371-88. doi: 10.1111/febs.13811. Epub 2016 Aug 5. FEBS J. 2016. PMID: 27406238 Free PMC article. - Activity-based assay for human mono-ADP-ribosyltransferases ARTD7/PARP15 and ARTD10/PARP10 aimed at screening and profiling inhibitors.
Venkannagari H, Fallarero A, Feijs KL, Lüscher B, Lehtiö L. Venkannagari H, et al. Eur J Pharm Sci. 2013 May 13;49(2):148-56. doi: 10.1016/j.ejps.2013.02.012. Epub 2013 Feb 26. Eur J Pharm Sci. 2013. PMID: 23485441 - The ARTT motif and a unified structural understanding of substrate recognition in ADP-ribosylating bacterial toxins and eukaryotic ADP-ribosyltransferases.
Han S, Tainer JA. Han S, et al. Int J Med Microbiol. 2002 Feb;291(6-7):523-9. doi: 10.1078/1438-4221-00162. Int J Med Microbiol. 2002. PMID: 11890553 Review. - Toward a unified nomenclature for mammalian ADP-ribosyltransferases.
Hottiger MO, Hassa PO, Lüscher B, Schüler H, Koch-Nolte F. Hottiger MO, et al. Trends Biochem Sci. 2010 Apr;35(4):208-19. doi: 10.1016/j.tibs.2009.12.003. Epub 2010 Jan 26. Trends Biochem Sci. 2010. PMID: 20106667 Review.
Cited by
- Dynamic subcellular localization of the mono-ADP-ribosyltransferase ARTD10 and interaction with the ubiquitin receptor p62.
Kleine H, Herrmann A, Lamark T, Forst AH, Verheugd P, Lüscher-Firzlaff J, Lippok B, Feijs KL, Herzog N, Kremmer E, Johansen T, Müller-Newen G, Lüscher B. Kleine H, et al. Cell Commun Signal. 2012 Sep 20;10(1):28. doi: 10.1186/1478-811X-10-28. Cell Commun Signal. 2012. PMID: 22992334 Free PMC article. - New readers and interpretations of poly(ADP-ribosyl)ation.
Kalisch T, Amé JC, Dantzer F, Schreiber V. Kalisch T, et al. Trends Biochem Sci. 2012 Sep;37(9):381-90. doi: 10.1016/j.tibs.2012.06.001. Epub 2012 Jul 3. Trends Biochem Sci. 2012. PMID: 22766145 Free PMC article. Review. - Reprogramming cellular events by poly(ADP-ribose)-binding proteins.
Krietsch J, Rouleau M, Pic É, Ethier C, Dawson TM, Dawson VL, Masson JY, Poirier GG, Gagné JP. Krietsch J, et al. Mol Aspects Med. 2013 Dec;34(6):1066-87. doi: 10.1016/j.mam.2012.12.005. Epub 2012 Dec 23. Mol Aspects Med. 2013. PMID: 23268355 Free PMC article. Review. - ADP-ribosylation of RNA and DNA: from in vitro characterization to in vivo function.
Weixler L, Schäringer K, Momoh J, Lüscher B, Feijs KLH, Žaja R. Weixler L, et al. Nucleic Acids Res. 2021 Apr 19;49(7):3634-3650. doi: 10.1093/nar/gkab136. Nucleic Acids Res. 2021. PMID: 33693930 Free PMC article. Review. - A systematic analysis of the PARP protein family identifies new functions critical for cell physiology.
Vyas S, Chesarone-Cataldo M, Todorova T, Huang YH, Chang P. Vyas S, et al. Nat Commun. 2013;4:2240. doi: 10.1038/ncomms3240. Nat Commun. 2013. PMID: 23917125 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases
Miscellaneous