Nuclear speckles - PubMed (original) (raw)
Review
Nuclear speckles
David L Spector et al. Cold Spring Harb Perspect Biol. 2011.
Abstract
Nuclear speckles, also known as interchromatin granule clusters, are nuclear domains enriched in pre-mRNA splicing factors, located in the interchromatin regions of the nucleoplasm of mammalian cells. When observed by immunofluorescence microscopy, they usually appear as 20-50 irregularly shaped structures that vary in size. Speckles are dynamic structures, and their constituents can exchange continuously with the nucleoplasm and other nuclear locations, including active transcription sites. Studies on the composition, structure, and dynamics of speckles have provided an important paradigm for understanding the functional organization of the nucleus and the dynamics of the gene expression machinery.
Figures
Figure 1.
Speckles form in the interchromatin space. HeLa cells showing splicing factors localized in a speckled pattern as well as being diffusely distributed throughout the nucleoplasm. Bar = 5 µm.
Figure 2.
Structured illumination microscopy, using the OMX system (Applied Precision, Issaqua, Washington), of a HeLa cell expressing SC35-EYFP. At 100 nm resolution substructure can be observed within speckles. In addition, the diffuse population of SC35-EYFP is resolved as a granular distribution. Projection of twelve 0.125 µm optical sections through the center of a nucleus encompassing 1.5 µm. Image provided by Zsolt Lazar and R. Ileng Kumaran. Bar = 2 µm.
Figure 3.
Nuclear speckles are equivalent to interchromatin granule clusters. Immunoelectron microscopy using a primary antibody against SC35 and a secondary antibody conjugated to 15 nm colloidal gold. IGCs are composed of a series of particles measuring 20–25 nm in diameter that are connected in places by a thin fibril resulting in a beaded chain appearance. Bar = 500 nm.
Similar articles
- Nuclear speckles: a model for nuclear organelles.
Lamond AI, Spector DL. Lamond AI, et al. Nat Rev Mol Cell Biol. 2003 Aug;4(8):605-12. doi: 10.1038/nrm1172. Nat Rev Mol Cell Biol. 2003. PMID: 12923522 Review. - Tissue-specific expression and dynamic organization of SR splicing factors in Arabidopsis.
Fang Y, Hearn S, Spector DL. Fang Y, et al. Mol Biol Cell. 2004 Jun;15(6):2664-73. doi: 10.1091/mbc.e04-02-0100. Epub 2004 Mar 19. Mol Biol Cell. 2004. PMID: 15034145 Free PMC article. - Nuclear speckles: molecular organization, biological function and role in disease.
Galganski L, Urbanek MO, Krzyzosiak WJ. Galganski L, et al. Nucleic Acids Res. 2017 Oct 13;45(18):10350-10368. doi: 10.1093/nar/gkx759. Nucleic Acids Res. 2017. PMID: 28977640 Free PMC article. Review. - SRSF1 regulates the assembly of pre-mRNA processing factors in nuclear speckles.
Tripathi V, Song DY, Zong X, Shevtsov SP, Hearn S, Fu XD, Dundr M, Prasanth KV. Tripathi V, et al. Mol Biol Cell. 2012 Sep;23(18):3694-706. doi: 10.1091/mbc.E12-03-0206. Epub 2012 Aug 1. Mol Biol Cell. 2012. PMID: 22855529 Free PMC article. - Disassembly of interchromatin granule clusters alters the coordination of transcription and pre-mRNA splicing.
Sacco-Bubulya P, Spector DL. Sacco-Bubulya P, et al. J Cell Biol. 2002 Feb 4;156(3):425-36. doi: 10.1083/jcb.200107017. Epub 2002 Feb 4. J Cell Biol. 2002. PMID: 11827980 Free PMC article.
Cited by
- Stress-Induced Evolution of the Nucleolus: The Role of Ribosomal Intergenic Spacer (rIGS) Transcripts.
Gavrilova AA, Neklesova MV, Zagryadskaya YA, Kuznetsova IM, Turoverov KK, Fonin AV. Gavrilova AA, et al. Biomolecules. 2024 Oct 20;14(10):1333. doi: 10.3390/biom14101333. Biomolecules. 2024. PMID: 39456266 Free PMC article. Review. - Exploring serine-arginine rich splicing factors: potential predictive markers for dysregulation in oral cancer.
Sharma S, Mittal M, Shukla A, Khan J, Dinand V, Saluja D. Sharma S, et al. BMC Cancer. 2024 Sep 3;24(1):1094. doi: 10.1186/s12885-024-12750-4. BMC Cancer. 2024. PMID: 39227899 Free PMC article. - The noncoding RNA MALAT1 is a critical regulator of the metastasis phenotype of lung cancer cells.
Gutschner T, Hämmerle M, Eissmann M, Hsu J, Kim Y, Hung G, Revenko A, Arun G, Stentrup M, Gross M, Zörnig M, MacLeod AR, Spector DL, Diederichs S. Gutschner T, et al. Cancer Res. 2013 Feb 1;73(3):1180-9. doi: 10.1158/0008-5472.CAN-12-2850. Epub 2012 Dec 14. Cancer Res. 2013. PMID: 23243023 Free PMC article. - Viral cell biology: Influenza raids the splicing store.
Valcárcel J, Ortín J. Valcárcel J, et al. Nat Microbiol. 2016 Jun 24;1(7):16100. doi: 10.1038/nmicrobiol.2016.100. Nat Microbiol. 2016. PMID: 27572980 No abstract available. - OpenNucleome for high-resolution nuclear structural and dynamical modeling.
Lao Z, Kamat KD, Jiang Z, Zhang B. Lao Z, et al. Elife. 2024 Aug 15;13:RP93223. doi: 10.7554/eLife.93223. Elife. 2024. PMID: 39146200 Free PMC article.
References
- Beck JS 1961. Variations in the morphological patterns of “autoimmune” nuclear fluorescence. Lancet 1: 1203–1205 - PubMed
Publication types
MeSH terms
Substances
Grants and funding
- 073980/WT_/Wellcome Trust/United Kingdom
- PN2 EY018244/EY/NEI NIH HHS/United States
- R01 GM042694/GM/NIGMS NIH HHS/United States
- P01 CA013106/CA/NCI NIH HHS/United States
- WT_/Wellcome Trust/United Kingdom
LinkOut - more resources
Full Text Sources