Molecular phylogeography of the brown bear (Ursus arctos) in Northeastern Asia based on analyses of complete mitochondrial DNA sequences - PubMed (original) (raw)
. 2013 Jul;30(7):1644-52.
doi: 10.1093/molbev/mst077. Epub 2013 Apr 25.
Tsutomu Mano, Alexei V Abramov, Gennady F Baryshnikov, Pavel A Kosintsev, Alexandr A Vorobiev, Evgeny G Raichev, Hiroshi Tsunoda, Yayoi Kaneko, Koichi Murata, Daisuke Fukui, Ryuichi Masuda
Affiliations
- PMID: 23619144
- DOI: 10.1093/molbev/mst077
Molecular phylogeography of the brown bear (Ursus arctos) in Northeastern Asia based on analyses of complete mitochondrial DNA sequences
Daisuke Hirata et al. Mol Biol Evol. 2013 Jul.
Abstract
To further elucidate the migration history of the brown bears (Ursus arctos) on Hokkaido Island, Japan, we analyzed the complete mitochondrial DNA (mtDNA) sequences of 35 brown bears from Hokkaido, the southern Kuril Islands (Etorofu and Kunashiri), Sakhalin Island, and the Eurasian Continent (continental Russia, Bulgaria, and Tibet), and those of four polar bears. Based on these sequences, we reconstructed the maternal phylogeny of the brown bear and estimated divergence times to investigate the timing of brown bear migrations, especially in northeastern Eurasia. Our gene tree showed the mtDNA haplotypes of all 73 brown and polar bears to be divided into eight divergent lineages. The brown bear on Hokkaido was divided into three lineages (central, eastern, and southern). The Sakhalin brown bear grouped with eastern European and western Alaskan brown bears. Etorofu and Kunashiri brown bears were closely related to eastern Hokkaido brown bears and could have diverged from the eastern Hokkaido lineage after formation of the channel between Hokkaido and the southern Kuril Islands. Tibetan brown bears diverged early in the eastern lineage. Southern Hokkaido brown bears were closely related to North American brown bears.
Keywords: Hokkaido; Ursus arctos; brown bear; complete mitochondrial DNA; phylogeography.
Similar articles
- Paternal phylogeographic structure of the brown bear (Ursus arctos) in northeastern Asia and the effect of male-mediated gene flow to insular populations.
Hirata D, Mano T, Abramov AV, Baryshnikov GF, Kosintsev PA, Murata K, Masuda R. Hirata D, et al. Zoological Lett. 2017 Nov 30;3:21. doi: 10.1186/s40851-017-0084-5. eCollection 2017. Zoological Lett. 2017. PMID: 29214050 Free PMC article. - Mitogenetic structure of brown bears (Ursus arctos L.) in northeastern Europe and a new time frame for the formation of European brown bear lineages.
Saarma U, Ho SY, Pybus OG, Kaljuste M, Tumanov IL, Kojola I, Vorobiev AA, Markov NI, Saveljev AP, Valdmann H, Lyapunova EA, Abramov AV, Männil P, Korsten M, Vulla E, Pazetnov SV, Pazetnov VS, Putchkovskiy SV, Rõkov AM. Saarma U, et al. Mol Ecol. 2007 Jan;16(2):401-13. doi: 10.1111/j.1365-294X.2006.03130.x. Mol Ecol. 2007. PMID: 17217353 - [New data on the phylogeography and genetic diversity of the brown bear Ursus arctos Linnaeus, 1758 of northeastern Eurasia (mtDNA control region polymorphism analysis)].
Salomashkina VV, Kholodova MV, Tiuten'kov OIu, Moskvitina NS, Erokhin NG. Salomashkina VV, et al. Izv Akad Nauk Ser Biol. 2014 Jan-Feb;(1):30-9. Izv Akad Nauk Ser Biol. 2014. PMID: 25735154 Russian. - New insights into dietary management of polar bears (Ursus maritimus) and brown bears (U. arctos).
Robbins CT, Tollefson TN, Rode KD, Erlenbach JA, Ardente AJ. Robbins CT, et al. Zoo Biol. 2022 Mar;41(2):166-175. doi: 10.1002/zoo.21658. Epub 2021 Nov 18. Zoo Biol. 2022. PMID: 34793606 Review. - Impacts of Human Recreation on Brown Bears (Ursus arctos): A Review and New Management Tool.
Fortin JK, Rode KD, Hilderbrand GV, Wilder J, Farley S, Jorgensen C, Marcot BG. Fortin JK, et al. PLoS One. 2016 Jan 5;11(1):e0141983. doi: 10.1371/journal.pone.0141983. eCollection 2016. PLoS One. 2016. PMID: 26731652 Free PMC article. Review.
Cited by
- The origins and diversification of Holarctic brown bear populations inferred from genomes of past and present populations.
Segawa T, Rey-Iglesia A, Lorenzen ED, Westbury MV. Segawa T, et al. Proc Biol Sci. 2024 Jan 31;291(2015):20232411. doi: 10.1098/rspb.2023.2411. Epub 2024 Jan 24. Proc Biol Sci. 2024. PMID: 38264778 - Ancient DNA Reveals Maternal Philopatry of the Northeast Eurasian Brown Bear (Ursus arctos) Population during the Holocene.
Boulygina E, Sharko F, Cheprasov M, Gladysheva-Azgari M, Slobodova N, Tsygankova S, Rastorguev S, Grigorieva L, Kopp M, Fernandes JMO, Novgorodov G, Boeskorov G, Protopopov A, Hwang WS, Tikhonov A, Nedoluzhko A. Boulygina E, et al. Genes (Basel). 2022 Oct 27;13(11):1961. doi: 10.3390/genes13111961. Genes (Basel). 2022. PMID: 36360198 Free PMC article. - Demographic History of the Brown Bear (Ursus arctos) on Hokkaido Island, Japan, Based on Whole-Genomic Sequence Analysis.
Endo Y, Osada N, Mano T, Masuda R. Endo Y, et al. Genome Biol Evol. 2021 Sep 1;13(9):evab195. doi: 10.1093/gbe/evab195. Genome Biol Evol. 2021. PMID: 34410373 Free PMC article. - Waves Out of the Korean Peninsula and Inter- and Intra-Species Replacements in Freshwater Fishes in Japan.
Taniguchi S, Bertl J, Futschik A, Kishino H, Okazaki T. Taniguchi S, et al. Genes (Basel). 2021 Feb 21;12(2):303. doi: 10.3390/genes12020303. Genes (Basel). 2021. PMID: 33669929 Free PMC article. - Population Structure and Evolution after Speciation of the Hokkaido Salamander (Hynobius retardatus).
Matsunami M, Igawa T, Michimae H, Miura T, Nishimura K. Matsunami M, et al. PLoS One. 2016 Jun 3;11(6):e0156815. doi: 10.1371/journal.pone.0156815. eCollection 2016. PLoS One. 2016. PMID: 27257807 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources