RNA structure prediction - PubMed (original) (raw)
Review
RNA structure prediction
D H Turner et al. Annu Rev Biophys Biophys Chem. 1988.
No abstract available
Similar articles
- Prediction of RNA secondary structure by free energy minimization.
Mathews DH, Turner DH. Mathews DH, et al. Curr Opin Struct Biol. 2006 Jun;16(3):270-8. doi: 10.1016/j.sbi.2006.05.010. Epub 2006 May 19. Curr Opin Struct Biol. 2006. PMID: 16713706 Review. - Prediction and design of DNA and RNA structures.
Andersen ES. Andersen ES. N Biotechnol. 2010 Jul 31;27(3):184-93. doi: 10.1016/j.nbt.2010.02.012. Epub 2010 Mar 1. N Biotechnol. 2010. PMID: 20193785 Review. - CONTRAfold: RNA secondary structure prediction without physics-based models.
Do CB, Woods DA, Batzoglou S. Do CB, et al. Bioinformatics. 2006 Jul 15;22(14):e90-8. doi: 10.1093/bioinformatics/btl246. Bioinformatics. 2006. PMID: 16873527 - Exploring RNA structure by integrative molecular modelling.
Masquida B, Beckert B, Jossinet F. Masquida B, et al. N Biotechnol. 2010 Jul 31;27(3):170-83. doi: 10.1016/j.nbt.2010.02.022. Epub 2010 Mar 3. N Biotechnol. 2010. PMID: 20206310 Review. - A folding "framework structure" of Tetrahymena group I intron.
Zhang X, Guo C, Zhang W, Cao H, Xie H, Wang K, Liu C. Zhang X, et al. J Theor Biol. 2010 Dec 21;267(4):495-501. doi: 10.1016/j.jtbi.2010.09.001. Epub 2010 Sep 19. J Theor Biol. 2010. PMID: 20858505
Cited by
- Sequence-dependence of Cy3 and Cy5 dyes in 3' terminally-labeled single-stranded DNA.
Kekić T, Lietard J. Kekić T, et al. Sci Rep. 2022 Aug 31;12(1):14803. doi: 10.1038/s41598-022-19069-9. Sci Rep. 2022. PMID: 36045146 Free PMC article. - Efficient aminoacylation of the tRNA(Ala) acceptor stem: dependence on the 2:71 base pair.
Beuning PJ, Nagan MC, Cramer CJ, Musier-Forsyth K, Gelpí JL, Bashford D. Beuning PJ, et al. RNA. 2002 May;8(5):659-70. doi: 10.1017/s1355838202020277. RNA. 2002. PMID: 12022232 Free PMC article. - Experimental Measurement of Aromatic Stacking Affinities in the Context of Duplex DNA.
Guckian KM, Schweitzer BA, Ren RX, Sheils CJ, Paris PL, Tahmassebi DC, Kool ET. Guckian KM, et al. J Am Chem Soc. 1996 Aug 28;118(34):8182-8183. doi: 10.1021/ja961733f. J Am Chem Soc. 1996. PMID: 20882117 Free PMC article. No abstract available. - Triplex-forming oligonucleotides trigger conformation changes of a target hairpin sequence.
Brossalina E, Demchenko E, Demchenko Y, Vlassov V, Toulmé JJ. Brossalina E, et al. Nucleic Acids Res. 1996 Sep 1;24(17):3392-8. doi: 10.1093/nar/24.17.3392. Nucleic Acids Res. 1996. PMID: 8811094 Free PMC article. - The cardiovirulent phenotype of coxsackievirus B3 is determined at a single site in the genomic 5' nontranslated region.
Tu Z, Chapman NM, Hufnagel G, Tracy S, Romero JR, Barry WH, Zhao L, Currey K, Shapiro B. Tu Z, et al. J Virol. 1995 Aug;69(8):4607-18. doi: 10.1128/JVI.69.8.4607-4618.1995. J Virol. 1995. PMID: 7609025 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Other Literature Sources