Protein structure modeling with MODELLER - PubMed (original) (raw)

• In silico Characterization of a Hypothetical Protein (PBJ89160.1) from Neisseria meningitidis Exhibits a New Insight on Nutritional Virulence and Molecular Docking to Uncover a Therapeutic Target.
  Asha IJ, Gupta SD, Hossain MM, Islam MN, Akter NN, Islam MM, Das SC, Barman DN. Asha IJ, et al. Evol Bioinform Online. 2024 Nov 11;20:11769343241298307. doi: 10.1177/11769343241298307. eCollection 2024. Evol Bioinform Online. 2024. PMID: 39534576 Free PMC article.
• Computational Modeling Study of the Molecular Basis of dNTP Selectivity in Human Terminal Deoxynucleotidyltransferase.
  Ukladov EO, Tyugashev TE, Kuznetsov NA. Ukladov EO, et al. Biomolecules. 2024 Aug 7;14(8):961. doi: 10.3390/biom14080961. Biomolecules. 2024. PMID: 39199349 Free PMC article.
• Metal-ion-chelating phenylalanine nanostructures reverse immune dysfunction and sensitize breast tumour to immune checkpoint blockade.
  Tan M, Cao G, Wang R, Cheng L, Huang W, Yin Y, Ma H, Ho SH, Wang Z, Zhu M, Ran H, Nie G, Wang H. Tan M, et al. Nat Nanotechnol. 2024 Aug 26. doi: 10.1038/s41565-024-01758-3. Online ahead of print. Nat Nanotechnol. 2024. PMID: 39187583
• Unveiling Tst3, a Multi-Target Gating Modifier Scorpion α Toxin from Tityus stigmurus Venom of Northeast Brazil: Evaluation and Comparison with Well-Studied Ts3 Toxin of Tityus serrulatus.
  Tibery DV, Nunes JAA, da Mata DO, Menezes LFS, de Souza ACB, Fernandes-Pedrosa MF, Treptow W, Schwartz EF. Tibery DV, et al. Toxins (Basel). 2024 Jun 3;16(6):257. doi: 10.3390/toxins16060257. Toxins (Basel). 2024. PMID: 38922152 Free PMC article.
• Outcomes of the EMDataResource cryo-EM Ligand Modeling Challenge.
  Lawson CL, Kryshtafovych A, Pintilie GD, Burley SK, Černý J, Chen VB, Emsley P, Gobbi A, Joachimiak A, Noreng S, Prisant MG, Read RJ, Richardson JS, Rohou AL, Schneider B, Sellers BD, Shao C, Sourial E, Williams CI, Williams CJ, Yang Y, Abbaraju V, Afonine PV, Baker ML, Bond PS, Blundell TL, Burnley T, Campbell A, Cao R, Cheng J, Chojnowski G, Cowtan KD, DiMaio F, Esmaeeli R, Giri N, Grubmüller H, Hoh SW, Hou J, Hryc CF, Hunte C, Igaev M, Joseph AP, Kao WC, Kihara D, Kumar D, Lang L, Lin S, Maddhuri Venkata Subramaniya SR, Mittal S, Mondal A, Moriarty NW, Muenks A, Murshudov GN, Nicholls RA, Olek M, Palmer CM, Perez A, Pohjolainen E, Pothula KR, Rowley CN, Sarkar D, Schäfer LU, Schlicksup CJ, Schröder GF, Shekhar M, Si D, Singharoy A, Sobolev OV, Terashi G, Vaiana AC, Vedithi SC, Verburgt J, Wang X, Warshamanage R, Winn MD, Weyand S, Yamashita K, Zhao M, Schmid MF, Berman HM, Chiu W. Lawson CL, et al. Nat Methods. 2024 Jul;21(7):1340-1348. doi: 10.1038/s41592-024-02321-7. Epub 2024 Jun 25. Nat Methods. 2024. PMID: 38918604