Molecular mechanisms in the developmental regulation of the maize Suppressor-mutator transposable element - PubMed (original) (raw)
. 1988 Nov;2(11):1364-80.
doi: 10.1101/gad.2.11.1364.
Affiliations
- PMID: 2463208
- DOI: 10.1101/gad.2.11.1364
Free article
Molecular mechanisms in the developmental regulation of the maize Suppressor-mutator transposable element
J A Banks et al. Genes Dev. 1988 Nov.
Free article
Abstract
The maize Suppressor-mutator (Spm) element can exist in one of three heritable forms: (1) a stably active form, (2) a stably inactive form, termed cryptic, and (3) a labile form, here termed programmable, in which the element exhibits one of a variety of heritable developmental programs of expression. Active elements are transcribed and are hypomethylated at sites upstream of the transcription start site, whereas inactive elements are transcriptionally silent and largely methylated at the upstream sites. Active (both stable and programmable), inactive programmable, and cryptic elements are unmethylated, partially methylated, and fully methylated, respectively, at sites within an 0.35-kb 80% G + C region just downstream from the transcription start site. An active Spm element in a genome with a cryptic element promotes its partial demethylation but not its transcriptional activation. In contrast, a trans-acting Spm promotes extensive demethylation and transcriptional activation of an inactive programmable element, as well as its heritable reactivation. These observations define the molecular components of the Spm element's developmental regulatory mechanism. We discuss their general relevance to the developmental regulation of gene expression.
Similar articles
- Epigenetic regulation of the maize Spm transposon.
Fedoroff N, Schläppi M, Raina R. Fedoroff N, et al. Bioessays. 1995 Apr;17(4):291-7. doi: 10.1002/bies.950170405. Bioessays. 1995. PMID: 7741722 Review. - TnpA trans-activates methylated maize Suppressor-mutator transposable elements in transgenic tobacco.
Schläppi M, Smith D, Fedoroff N. Schläppi M, et al. Genetics. 1993 Apr;133(4):1009-21. doi: 10.1093/genetics/133.4.1009. Genetics. 1993. PMID: 8385049 Free PMC article. - Mutations, epimutations, and the developmental programming of the maize Suppressor-mutator transposable element.
Fedoroff N, Masson P, Banks JA. Fedoroff N, et al. Bioessays. 1989 May;10(5):139-44. doi: 10.1002/bies.950100502. Bioessays. 1989. PMID: 2545188 Review. - Is the Suppressor-mutator element controlled by a basic developmental regulatory mechanism?
Fedoroff NV, Banks JA. Fedoroff NV, et al. Genetics. 1988 Oct;120(2):559-77. doi: 10.1093/genetics/120.2.559. Genetics. 1988. PMID: 2848747 Free PMC article. - Epigenetic mechanisms in the regulation of the maize Suppressor-mutator transposon.
Raina R, Schläppi M, Fedoroff N. Raina R, et al. Novartis Found Symp. 1998;214:133-40; discussion 140-3, 163-7. doi: 10.1002/9780470515501.ch8. Novartis Found Symp. 1998. PMID: 9601015 Review.
Cited by
- From parasites to partners: exploring the intricacies of host-transposon dynamics and coevolution.
Chakrabarty P, Sen R, Sengupta S. Chakrabarty P, et al. Funct Integr Genomics. 2023 Aug 23;23(3):278. doi: 10.1007/s10142-023-01206-w. Funct Integr Genomics. 2023. PMID: 37610667 Review. - Transposable Elements as a Source of Novel Repetitive DNA in the Eukaryote Genome.
Zattera ML, Bruschi DP. Zattera ML, et al. Cells. 2022 Oct 26;11(21):3373. doi: 10.3390/cells11213373. Cells. 2022. PMID: 36359770 Free PMC article. Review. - Epigenetics and its role in effecting agronomical traits.
Gupta C, Salgotra RK. Gupta C, et al. Front Plant Sci. 2022 Aug 15;13:925688. doi: 10.3389/fpls.2022.925688. eCollection 2022. Front Plant Sci. 2022. PMID: 36046583 Free PMC article. Review. - Exploitation of epigenetic variation of crop wild relatives for crop improvement and agrobiodiversity preservation.
Varotto S, Krugman T, Aiese Cigliano R, Kashkush K, Kondić-Špika A, Aravanopoulos FA, Pradillo M, Consiglio F, Aversano R, Pecinka A, Miladinović D. Varotto S, et al. Theor Appl Genet. 2022 Nov;135(11):3987-4003. doi: 10.1007/s00122-022-04122-y. Epub 2022 Jun 9. Theor Appl Genet. 2022. PMID: 35678824 Free PMC article. Review. - The epiallelic potential of transposable elements and its evolutionary significance in plants.
Baduel P, Colot V. Baduel P, et al. Philos Trans R Soc Lond B Biol Sci. 2021 Jun 7;376(1826):20200123. doi: 10.1098/rstb.2020.0123. Epub 2021 Apr 19. Philos Trans R Soc Lond B Biol Sci. 2021. PMID: 33866816 Free PMC article. Review.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources