Gene structure, organization, and expression in archaebacteria - PubMed (original) (raw)
Review
Gene structure, organization, and expression in archaebacteria
J W Brown et al. Crit Rev Microbiol. 1989.
Abstract
Major advances have recently been made in understanding the molecular biology of the archaebacteria. In this review, we compare the structure of protein and stable RNA-encoding genes cloned and sequenced from each of the major classes of archaebacteria: the methanogens, extreme halophiles, and acid thermophiles. Protein-encoding genes, including some encoding proteins directly involved in methanogenesis and photoautotrophy, are analyzed on the basis of gene organization and structure, transcriptional control signals, codon usage, and evolutionary conservation. Stable RNA-encoding genes are compared for gene organization and structure, transcriptional signals, and processing events involved in RNA maturation, including intron removal. Comparisons of archaebacterial structures and regulatory systems are made with their eubacterial and eukaryotic homologs.
Similar articles
- Genome organization and transcription in archaebacteria.
Schnabel H, Schnabel R, Yeats S, Tu J, Gierl A, Neumann H, Zillig W. Schnabel H, et al. Folia Biol (Praha). 1984;30 Spec No:2-6. Folia Biol (Praha). 1984. PMID: 6202564 - Analysis of expression of prgX, a key negative regulator of the transfer of the Enterococcus faecalis pheromone-inducible plasmid pCF10.
Bae T, Clerc-Bardin S, Dunny GM. Bae T, et al. J Mol Biol. 2000 Apr 7;297(4):861-75. doi: 10.1006/jmbi.2000.3628. J Mol Biol. 2000. PMID: 10736223 - Characterization and expression analyses of anti-apoptotic Bcl-2-like genes NR-13, Mcl-1, Bcl-X1, and Bcl-X2 in Atlantic cod (Gadus morhua).
Feng CY, Rise ML. Feng CY, et al. Mol Immunol. 2010 Jan;47(4):763-84. doi: 10.1016/j.molimm.2009.10.011. Epub 2009 Nov 17. Mol Immunol. 2010. PMID: 19923001 - Comparative evaluation of gene expression in archaebacteria.
Zillig W, Palm P, Reiter WD, Gropp F, Pühler G, Klenk HP. Zillig W, et al. Eur J Biochem. 1988 May 2;173(3):473-82. doi: 10.1111/j.1432-1033.1988.tb14023.x. Eur J Biochem. 1988. PMID: 3131139 Review. - Molecular biology of archaebacteria.
Dennis PP. Dennis PP. J Bacteriol. 1986 Nov;168(2):471-8. doi: 10.1128/jb.168.2.471-478.1986. J Bacteriol. 1986. PMID: 2430938 Free PMC article. Review. No abstract available.
Cited by
- Looking through the Lens of the Ribosome Biogenesis Evolutionary History: Possible Implications for Archaeal Phylogeny and Eukaryogenesis.
Jüttner M, Ferreira-Cerca S. Jüttner M, et al. Mol Biol Evol. 2022 Apr 11;39(4):msac054. doi: 10.1093/molbev/msac054. Mol Biol Evol. 2022. PMID: 35275997 Free PMC article. - aCPSF1 cooperates with terminator U-tract to dictate archaeal transcription termination efficacy.
Li J, Yue L, Li Z, Zhang W, Zhang B, Zhao F, Dong X. Li J, et al. Elife. 2021 Dec 29;10:e70464. doi: 10.7554/eLife.70464. Elife. 2021. PMID: 34964713 Free PMC article. - Identification of RNA 3´ ends and termination sites in Haloferax volcanii.
Berkemer SJ, Maier LK, Amman F, Bernhart SH, Wörtz J, Märkle P, Pfeiffer F, Stadler PF, Marchfelder A. Berkemer SJ, et al. RNA Biol. 2020 May;17(5):663-676. doi: 10.1080/15476286.2020.1723328. Epub 2020 Feb 10. RNA Biol. 2020. PMID: 32041469 Free PMC article. - Phylogeny vs genome reshuffling: horizontal gene transfer.
Lal S, Cheema S, Kalia VC. Lal S, et al. Indian J Microbiol. 2008 Jun;48(2):228-42. doi: 10.1007/s12088-008-0034-1. Epub 2008 Jul 27. Indian J Microbiol. 2008. PMID: 23100716 Free PMC article. - Genetic manipulation of Methanosarcina spp.
Kohler PR, Metcalf WW. Kohler PR, et al. Front Microbiol. 2012 Jul 24;3:259. doi: 10.3389/fmicb.2012.00259. eCollection 2012. Front Microbiol. 2012. PMID: 22837755 Free PMC article.