The -24/-12 promoter comes of age - PubMed (original) (raw)
Review
The -24/-12 promoter comes of age
B Thöny et al. FEMS Microbiol Rev. 1989 Dec.
Abstract
A new bacterial promoter type has been identified in the last few years. Originally designated as nif (= nitrogen fixation) or ntr (= nitrogen regulation) consensus promoter, it is now evident that this promoter occurs in many different bacterial species and is used not only for genes involved in nitrogen assimilation but also for genes determining many other unrelated metabolic functions. The general features of this type of promoter are (i) the conserved -24(GG)/-12(GC) consensus sequence, (ii) its recognition by a specific RNA polymerase sigma factor, sigma 54, which is encoded by the ntrA gene (synonyms: glnF, rpoN, rpoE), and (iii) the requirement for a transcriptional regulatory protein to activate the expression of the associated genes. In addition, many (but not all) of these genes possess a promoter-upstream activator sequence (enhancer) which is the target site for the binding of the activating protein and is required for maximal expression. In some cases, in which gene expression does not appear to be dependent on the presence of upstream binding sites, the activating protein may interact directly with the RNA polymerase-promoter complex. In conclusion, the expression from all -24/-12 consensus promoters known to date is positively controlled.
Similar articles
- Bradyrhizobium japonicum has two differentially regulated, functional homologs of the sigma 54 gene (rpoN).
Kullik I, Fritsche S, Knobel H, Sanjuan J, Hennecke H, Fischer HM. Kullik I, et al. J Bacteriol. 1991 Feb;173(3):1125-38. doi: 10.1128/jb.173.3.1125-1138.1991. J Bacteriol. 1991. PMID: 1991712 Free PMC article. - Escherichia coli sigma 54 RNA polymerase recognizes Caulobacter crescentus flbG and flaN flagellar gene promoters in vitro.
Ninfa AJ, Mullin DA, Ramakrishnan G, Newton A. Ninfa AJ, et al. J Bacteriol. 1989 Jan;171(1):383-91. doi: 10.1128/jb.171.1.383-391.1989. J Bacteriol. 1989. PMID: 2644197 Free PMC article. - Expression of sigma 54 (ntrA)-dependent genes is probably united by a common mechanism.
Kustu S, Santero E, Keener J, Popham D, Weiss D. Kustu S, et al. Microbiol Rev. 1989 Sep;53(3):367-76. doi: 10.1128/mr.53.3.367-376.1989. Microbiol Rev. 1989. PMID: 2677638 Free PMC article. Review. No abstract available. - Nitrogen control in bacteria.
Merrick MJ, Edwards RA. Merrick MJ, et al. Microbiol Rev. 1995 Dec;59(4):604-22. doi: 10.1128/mr.59.4.604-622.1995. Microbiol Rev. 1995. PMID: 8531888 Free PMC article. Review.
Cited by
- Transcription of the Azospirillum brasilense nifH gene is positively regulated by NifA and NtrA and is negatively controlled by the cellular nitrogen status.
Vande Broek A, Michiels J, de Faria SM, Milcamps A, Vanderleyden J. Vande Broek A, et al. Mol Gen Genet. 1992 Mar;232(2):279-83. doi: 10.1007/BF00280007. Mol Gen Genet. 1992. PMID: 1557035 - Characterization of three different nitrogen-regulated promoter regions for the expression of glnB and glnA in Azospirillum brasilense.
de Zamaroczy M, Delorme F, Elmerich C. de Zamaroczy M, et al. Mol Gen Genet. 1990 Dec;224(3):421-30. doi: 10.1007/BF00262437. Mol Gen Genet. 1990. PMID: 1702507 - Three trans-acting regulatory functions control hydrogenase synthesis in Alcaligenes eutrophus.
Eberz G, Friedrich B. Eberz G, et al. J Bacteriol. 1991 Mar;173(6):1845-54. doi: 10.1128/jb.173.6.1845-1854.1991. J Bacteriol. 1991. PMID: 2001989 Free PMC article. - Cloning, nucleotide sequence, and expression of the plasmid-encoded genes for the two-component 2-halobenzoate 1,2-dioxygenase from Pseudomonas cepacia 2CBS.
Haak B, Fetzner S, Lingens F. Haak B, et al. J Bacteriol. 1995 Feb;177(3):667-75. doi: 10.1128/jb.177.3.667-675.1995. J Bacteriol. 1995. PMID: 7530709 Free PMC article. - Requirement for the enzymes acetoacetyl coenzyme A synthetase and poly-3-hydroxybutyrate (PHB) synthase for growth of Sinorhizobium meliloti on PHB cycle intermediates.
Cai GQ, Driscoll BT, Charles TC. Cai GQ, et al. J Bacteriol. 2000 Apr;182(8):2113-8. doi: 10.1128/JB.182.8.2113-2118.2000. J Bacteriol. 2000. PMID: 10735852 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Miscellaneous