N6-methyladenine DNA modification in Drosophila - PubMed (original) (raw)
. 2015 May 7;161(4):893-906.
doi: 10.1016/j.cell.2015.04.018. Epub 2015 Apr 30.
Hua Huang 2, Di Liu 2, Ying Cheng 1, Xiaoling Liu 2, Wenxin Zhang 1, Ruichuan Yin 2, Dapeng Zhang 2, Peng Zhang 3, Jianzhao Liu 4, Chaoyi Li 1, Baodong Liu 2, Yuewan Luo 1, Yuanxiang Zhu 1, Ning Zhang 2, Shunmin He 3, Chuan He 4, Hailin Wang 5, Dahua Chen 6
Affiliations
- PMID: 25936838
- DOI: 10.1016/j.cell.2015.04.018
Free article
N6-methyladenine DNA modification in Drosophila
Guoqiang Zhang et al. Cell. 2015.
Free article
Abstract
DNA N(6)-methyladenine (6mA) modification is commonly found in microbial genomes and plays important functions in regulating numerous biological processes in bacteria. However, whether 6mA occurs and what its potential roles are in higher-eukaryote cells remain unknown. Here, we show that 6mA is present in Drosophila genome and that the 6mA modification is dynamic and is regulated by the Drosophila Tet homolog, DNA 6mA demethylase (DMAD), during embryogenesis. Importantly, our biochemical assays demonstrate that DMAD directly catalyzes 6mA demethylation in vitro. Further genetic and sequencing analyses reveal that DMAD is essential for development and that DMAD removes 6mA primarily from transposon regions, which correlates with transposon suppression in Drosophila ovary. Collectively, we uncover a DNA modification in Drosophila and describe a potential role of the DMAD-6mA regulatory axis in controlling development in higher eukaryotes.
Copyright © 2015 Elsevier Inc. All rights reserved.
Similar articles
- Active N6-Methyladenine Demethylation by DMAD Regulates Gene Expression by Coordinating with Polycomb Protein in Neurons.
Yao B, Li Y, Wang Z, Chen L, Poidevin M, Zhang C, Lin L, Wang F, Bao H, Jiao B, Lim J, Cheng Y, Huang L, Phillips BL, Xu T, Duan R, Moberg KH, Wu H, Jin P. Yao B, et al. Mol Cell. 2018 Sep 6;71(5):848-857.e6. doi: 10.1016/j.molcel.2018.07.005. Epub 2018 Aug 2. Mol Cell. 2018. PMID: 30078725 Free PMC article. - N6-Methyladenine DNA Modification in the Human Genome.
Xiao CL, Zhu S, He M, Chen D, Zhang Q, Chen Y, Yu G, Liu J, Xie SQ, Luo F, Liang Z, Wang DP, Bo XC, Gu XF, Wang K, Yan GR. Xiao CL, et al. Mol Cell. 2018 Jul 19;71(2):306-318.e7. doi: 10.1016/j.molcel.2018.06.015. Epub 2018 Jul 12. Mol Cell. 2018. PMID: 30017583 - DNA N6-methyladenine in metazoans: functional epigenetic mark or bystander?
Luo GZ, He C. Luo GZ, et al. Nat Struct Mol Biol. 2017 Jun 6;24(6):503-506. doi: 10.1038/nsmb.3412. Nat Struct Mol Biol. 2017. PMID: 28586322 - DNA N(6)-methyladenine: a new epigenetic mark in eukaryotes?
Luo GZ, Blanco MA, Greer EL, He C, Shi Y. Luo GZ, et al. Nat Rev Mol Cell Biol. 2015 Dec;16(12):705-10. doi: 10.1038/nrm4076. Epub 2015 Oct 28. Nat Rev Mol Cell Biol. 2015. PMID: 26507168 Free PMC article. Review. - The exploration of N6-deoxyadenosine methylation in mammalian genomes.
Li X, Zhang Z, Luo X, Schrier J, Yang AD, Wu TP. Li X, et al. Protein Cell. 2021 Oct;12(10):756-768. doi: 10.1007/s13238-021-00866-3. Epub 2021 Aug 17. Protein Cell. 2021. PMID: 34405377 Free PMC article. Review.
Cited by
- Selective Effect of DNA N6-Methyladenosine Modification on Transcriptional Genetic Variations in East Asian Samples.
Luan M, Chen K, Zhao W, Tang M, Wang L, Liu S, Zhu L, Xie S. Luan M, et al. Int J Mol Sci. 2024 Sep 27;25(19):10400. doi: 10.3390/ijms251910400. Int J Mol Sci. 2024. PMID: 39408729 Free PMC article. - Dealkylation of Macromolecules by Eukaryotic α-Ketoglutarate-Dependent Dioxygenases from the AlkB-like Family.
Davletgildeeva AT, Kuznetsov NA. Davletgildeeva AT, et al. Curr Issues Mol Biol. 2024 Sep 20;46(9):10462-10491. doi: 10.3390/cimb46090622. Curr Issues Mol Biol. 2024. PMID: 39329974 Free PMC article. Review. - The biological function of demethylase ALKBH1 and its role in human diseases.
Zhong J, Xu Z, Ding N, Wang Y, Chen W. Zhong J, et al. Heliyon. 2024 Jun 24;10(13):e33489. doi: 10.1016/j.heliyon.2024.e33489. eCollection 2024 Jul 15. Heliyon. 2024. PMID: 39040364 Free PMC article. Review. - Adenosine Deaminase-Like Gene-Carried Lentivirus Toolkit for Identification of DNA N6-Methyladenine Origins.
Liang Z, Chen S, Li Y, Lai W, Wang H. Liang Z, et al. Adv Sci (Weinh). 2024 Sep;11(35):e2403376. doi: 10.1002/advs.202403376. Epub 2024 Jul 18. Adv Sci (Weinh). 2024. PMID: 39023073 Free PMC article. - Designing Epigenome Editors: Considerations of Biochemical and Locus Specificities.
Yagci ZB, Kelkar GR, Johnson TJ, Sen D, Keung AJ. Yagci ZB, et al. Methods Mol Biol. 2024;2842:23-55. doi: 10.1007/978-1-0716-4051-7_2. Methods Mol Biol. 2024. PMID: 39012589
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases
Miscellaneous