Expanding the Molecular and Clinical Phenotype of SSR4-CDG - PubMed (original) (raw)
Case Reports
. 2015 Nov;36(11):1048-51.
doi: 10.1002/humu.22856. Epub 2015 Aug 27.
Kimiyo Raymond 2, Martin Kircher 3, Kati J Buckingham 4, Tim Wood 5, Jay Shendure 3, Deborah A Nickerson 3, Michael J Bamshad 3 4; University of Washington Center for Mendelian Genomics; Jonathan T S Wong 1, Fabiola Paoli Monteiro 6 7, Brett H Graham 8, Sheryl Jackson 9, Rebecca Sparkes 9, Angela E Scheuerle 10, Sara Cathey 5, Fernando Kok 7 11, James B Gibson 12, Hudson H Freeze 1
Affiliations
- PMID: 26264460
- PMCID: PMC4604052
- DOI: 10.1002/humu.22856
Case Reports
Expanding the Molecular and Clinical Phenotype of SSR4-CDG
Bobby G Ng et al. Hum Mutat. 2015 Nov.
Abstract
Congenital disorders of glycosylation (CDG) are a group of mostly autosomal recessive disorders primarily characterized by neurological abnormalities. Recently, we described a single CDG patient with a de novo mutation in the X-linked gene, Signal Sequence Receptor 4 (SSR4). We performed whole-exome sequencing to identify causal variants in several affected individuals who had either an undifferentiated neurological disorder or unsolved CDG of unknown etiology based on abnormal transferrin glycosylation. We now report eight affected males with either de novo (4) or inherited (4) loss of function mutations in SSR4. Western blot analysis revealed that the mutations caused a complete loss of SSR4 protein. In nearly all cases, the abnormal glycosylation of serum transferrin was only slightly above the accepted normal cutoff range.
Keywords: SSR4; carbohydrate-deficient transferrin; congenital disorders of glycosylation; signal sequence receptor 4; translocon complex.
© 2015 WILEY PERIODICALS, INC.
Figures
Figure 1. Mutation schematic of SSR4 mutations and Western blot analysis from patient fibroblasts
(A) Schematic representation of human SSR4 gene showing the positions of the identified mutations presented in our cohort. Coding regions are depicted as black boxes with appropriate exon number listed above. For cDNA numbering, +1 represents the A of the ATG translation initiation codon in the reference sequence, with the initiation codon as codon 1. (B) Western blot analysis of SSR4 protein from a total of six cases, including the index case reported by Losfeld et al. GM00038, GM01652 and GM03348 are commercially available primary fibroblast lines from apparently healthy individuals. Western blot detection of alpha-Tubulin was used as a loading control.
Figure 2. Summary Clinical phenotype
Clinical information was compiled on the nine affected males including the index case reported by Losfeld et al. and summarized.
Similar articles
- Expanding the phenotype of X-linked SSR4-CDG: Connective tissue implications.
Castiglioni C, Feillet F, Barnerias C, Wiedemann A, Muchart J, Cortes F, Hernando-Davalillo C, Montero R, Dupré T, Bruneel A, Seta N, Vuillaumier-Barrot S, Serrano M. Castiglioni C, et al. Hum Mutat. 2021 Feb;42(2):142-149. doi: 10.1002/humu.24151. Epub 2020 Dec 21. Hum Mutat. 2021. PMID: 33300232 - SSR4-CDG, an ultra-rare X-linked congenital disorder of glycosylation affecting the TRAP complex: Review of 22 affected individuals including the first adult patient.
Johnsen C, Tabatadze N, Radenkovic S, Botzo G, Kuschel B, Melikishvili G, Morava E. Johnsen C, et al. Mol Genet Metab. 2024 Jul;142(3):108477. doi: 10.1016/j.ymgme.2024.108477. Epub 2024 Apr 18. Mol Genet Metab. 2024. PMID: 38805916 Review. - Mutations in the translocon-associated protein complex subunit SSR3 cause a novel congenital disorder of glycosylation.
Ng BG, Lourenço CM, Losfeld ME, Buckingham KJ, Kircher M, Nickerson DA, Shendure J, Bamshad MJ; University of Washington Center for Mendelian Genomics; Freeze HH. Ng BG, et al. J Inherit Metab Dis. 2019 Sep;42(5):993-997. doi: 10.1002/jimd.12091. Epub 2019 Apr 16. J Inherit Metab Dis. 2019. PMID: 30945312 Free PMC article. - A new congenital disorder of glycosylation caused by a mutation in SSR4, the signal sequence receptor 4 protein of the TRAP complex.
Losfeld ME, Ng BG, Kircher M, Buckingham KJ, Turner EH, Eroshkin A, Smith JD, Shendure J, Nickerson DA, Bamshad MJ; University of Washington Center for Mendelian Genomics; Freeze HH. Losfeld ME, et al. Hum Mol Genet. 2014 Mar 15;23(6):1602-5. doi: 10.1093/hmg/ddt550. Epub 2013 Nov 11. Hum Mol Genet. 2014. PMID: 24218363 Free PMC article. - Exome sequence identified a c.320A > G ALG13 variant in a female with infantile epileptic encephalopathy with normal glycosylation and random X inactivation: Review of the literature.
Hamici S, Bastaki F, Khalifa M. Hamici S, et al. Eur J Med Genet. 2017 Oct;60(10):541-547. doi: 10.1016/j.ejmg.2017.07.014. Epub 2017 Aug 1. Eur J Med Genet. 2017. PMID: 28778787 Review.
Cited by
- X-chromosome association studies of congenital heart defects.
Agopian AJ, Hoang TT, Goldmuntz E, Hakonarson H, Musfee FI, Mitchell LE; Pediatric Cardiac Genomics Consortium. Agopian AJ, et al. Am J Med Genet A. 2020 Jan;182(1):250-254. doi: 10.1002/ajmg.a.61411. Epub 2019 Nov 15. Am J Med Genet A. 2020. PMID: 31729158 Free PMC article. No abstract available. - Dissecting the molecular organization of the translocon-associated protein complex.
Pfeffer S, Dudek J, Schaffer M, Ng BG, Albert S, Plitzko JM, Baumeister W, Zimmermann R, Freeze HH, Engel BD, Förster F. Pfeffer S, et al. Nat Commun. 2017 Feb 20;8:14516. doi: 10.1038/ncomms14516. Nat Commun. 2017. PMID: 28218252 Free PMC article. - Complexity and Specificity of Sec61-Channelopathies: Human Diseases Affecting Gating of the Sec61 Complex.
Sicking M, Lang S, Bochen F, Roos A, Drenth JPH, Zakaria M, Zimmermann R, Linxweiler M. Sicking M, et al. Cells. 2021 Apr 27;10(5):1036. doi: 10.3390/cells10051036. Cells. 2021. PMID: 33925740 Free PMC article. Review. - What is new in CDG?
Jaeken J, Péanne R. Jaeken J, et al. J Inherit Metab Dis. 2017 Jul;40(4):569-586. doi: 10.1007/s10545-017-0050-6. Epub 2017 May 8. J Inherit Metab Dis. 2017. PMID: 28484880 Review. - Perspectives on Glycosylation and Its Congenital Disorders.
Ng BG, Freeze HH. Ng BG, et al. Trends Genet. 2018 Jun;34(6):466-476. doi: 10.1016/j.tig.2018.03.002. Epub 2018 Mar 29. Trends Genet. 2018. PMID: 29606283 Free PMC article. Review.
References
- Hartmann E, Gorlich D, Kostka S, Otto A, Kraft R, Knespel S, Burger E, Rapoport TA, Prehn S. A tetrameric complex of membrane proteins in the endoplasmic reticulum. Eur J Biochem. 1993;214:375–381. - PubMed
Publication types
MeSH terms
Substances
Grants and funding
- U54 HG006493/HG/NHGRI NIH HHS/United States
- R01DK99551/DK/NIDDK NIH HHS/United States
- UM1 HG006493/HG/NHGRI NIH HHS/United States
- 1U54HG006493/HG/NHGRI NIH HHS/United States
- R01 DK099551/DK/NIDDK NIH HHS/United States
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases