Evaluation of GRCh38 and de novo haploid genome assemblies demonstrates the enduring quality of the reference assembly - PubMed (original) (raw)

Comprehensive variation discovery and recovery of missing sequence in the pig genome using multiple de novo assemblies.

Li M, Chen L, Tian S, Lin Y, Tang Q, Zhou X, Li D, Yeung CKL, Che T, Jin L, Fu Y, Ma J, Wang X, Jiang A, Lan J, Pan Q, Liu Y, Luo Z, Guo Z, Liu H, Zhu L, Shuai S, Tang G, Zhao J, Jiang Y, Bai L, Zhang S, Mai M, Li C, Wang D, Gu Y, Wang G, Lu H, Li Y, Zhu H, Li Z, Li M, Gladyshev VN, Jiang Z, Zhao S, Wang J, Li R, Li X. Li M, et al. Genome Res. 2017 May;27(5):865-874. doi: 10.1101/gr.207456.116. Epub 2016 Sep 19. Genome Res. 2017. PMID: 27646534 Free PMC article.