The evolution of bladder cancer genomics: What have we learned and how can we use it? - PubMed (original) (raw)
Review
. 2018 Jul;36(7):313-320.
doi: 10.1016/j.urolonc.2018.02.017. Epub 2018 Mar 21.
Affiliations
- PMID: 29573965
- DOI: 10.1016/j.urolonc.2018.02.017
Review
The evolution of bladder cancer genomics: What have we learned and how can we use it?
François Audenet et al. Urol Oncol. 2018 Jul.
Abstract
Background: With advancements in molecular biology techniques, great progress has been made in the understanding of urothelial carcinoma pathogenesis.
Objective: To examine the historic description of molecular alterations in bladder cancer and their evolution towards our current comprehension of the biology of the disease.
Results: Historically, a two-pathway model was described from histological and cytogenetic studies: low-grade papillary non-muscle invasive bladder cancers (NMIBC) were described to arise from epithelial hyperplasia with loss of chromosome 9 as an early event, whereas muscle-invasive bladder cancers (MIBC) were considered to develop from dysplasia, associated with genetic instability. Although there could be connections between the 2 pathways, NMIBC and MIBC were largely believed to develop secondary to different molecular alterations. Next-generation sequencing has allowed important insights into cancer biology and a better understanding of the pathways involved in bladder cancer pathogenesis and heterogeneity. Urothelial carcinoma has been found to have a high frequency of somatic mutations compared to other solid tumors, including several mutations in multiple signaling pathways, such as cell cycle regulators (TP53, RB1), RTK/RAS/RAF pathway, PI3K/AKT/mTOR pathway and TERT gene promoter. Epigenetic changes and mutations in chromatin remodeling genes are especially frequent in bladder cancer. Mutations in FGFR3 and KDM6A are more common in NMIBC than in MIBC, whereas mutations in TP53 and KMT2D are more common in MIBC, suggesting the previously hypothesized 2 different pathways, with a subset of tumors progressing from NMIBC to MIBC. Using comprehensive RNA expression profiling studies, at least 5 subtypes of bladder cancer have been identified, the most fundamental division being Basal/Squamous-like and Luminal. These subtypes have different prognoses, natural histories and responses to systemic treatments: Luminal subtypes are enriched with papillary histology and have a better prognosis, while Basal/Squamous-like subtypes are enriched with squamous features, are associated with advanced stage at presentation, and portend a worse prognosis.
Conclusion: This new understanding of bladder cancer will optimistically translate into better understanding of this heterogeneous disease and lead to improvement in patient outcome and quality of life through better tailored treatments.
Keywords: Bladder cancer; Genetics; Molecular subtypes; Pathways; Urothelial carcinoma.
Copyright © 2018 Elsevier Inc. All rights reserved.
Similar articles
- Molecular Subtypes of Urothelial Bladder Cancer: Results from a Meta-cohort Analysis of 2411 Tumors.
Tan TZ, Rouanne M, Tan KT, Huang RY, Thiery JP. Tan TZ, et al. Eur Urol. 2019 Mar;75(3):423-432. doi: 10.1016/j.eururo.2018.08.027. Epub 2018 Sep 10. Eur Urol. 2019. PMID: 30213523 - Targeted DNA and RNA Sequencing of Paired Urothelial and Squamous Bladder Cancers Reveals Discordant Genomic and Transcriptomic Events and Unique Therapeutic Implications.
Hovelson DH, Udager AM, McDaniel AS, Grivas P, Palmbos P, Tamura S, Lazo de la Vega L, Palapattu G, Veeneman B, El-Sawy L, Sadis SE, Morgan TM, Montgomery JS, Weizer AZ, Day KC, Neamati N, Liebert M, Keller ET, Day ML, Mehra R, Tomlins SA. Hovelson DH, et al. Eur Urol. 2018 Dec;74(6):741-753. doi: 10.1016/j.eururo.2018.06.047. Epub 2018 Jul 20. Eur Urol. 2018. PMID: 30033047 - Comprehensive Genomic Characterization of Upper Tract Urothelial Carcinoma.
Moss TJ, Qi Y, Xi L, Peng B, Kim TB, Ezzedine NE, Mosqueda ME, Guo CC, Czerniak BA, Ittmann M, Wheeler DA, Lerner SP, Matin SF. Moss TJ, et al. Eur Urol. 2017 Oct;72(4):641-649. doi: 10.1016/j.eururo.2017.05.048. Epub 2017 Jun 7. Eur Urol. 2017. PMID: 28601352 - [Point somatic mutations in bladder cancer: key carcinogenesis events, diagnostic markers and therapeutic targets].
Mikhailenko DS, Nemtsova MV. Mikhailenko DS, et al. Urologiia. 2016 Feb;(1):100-105. Urologiia. 2016. PMID: 28247712 Review. Russian. - Molecular Subtypes of Bladder Cancer.
McConkey DJ, Choi W. McConkey DJ, et al. Curr Oncol Rep. 2018 Aug 20;20(10):77. doi: 10.1007/s11912-018-0727-5. Curr Oncol Rep. 2018. PMID: 30128829 Review.
Cited by
- The role of circular RNA targeting IGF2BPs in cancer-a potential target for cancer therapy.
Luo X, Shi J, Wang S, Jin X. Luo X, et al. J Mol Med (Berl). 2024 Nov;102(11):1297-1314. doi: 10.1007/s00109-024-02488-8. Epub 2024 Sep 17. J Mol Med (Berl). 2024. PMID: 39287635 Review. - Advancing bladder cancer management: development of a prognostic model and personalized therapy.
Huang X, Du G, Yang Y, Su P, Chen S, Cai C, Huang T, Zeng Y, Tao Y, Tian D, Zhang N. Huang X, et al. Front Immunol. 2024 Jul 22;15:1430792. doi: 10.3389/fimmu.2024.1430792. eCollection 2024. Front Immunol. 2024. PMID: 39104534 Free PMC article. - GraphPath: a graph attention model for molecular stratification with interpretability based on the pathway-pathway interaction network.
Ma T, Wang J. Ma T, et al. Bioinformatics. 2024 Mar 29;40(4):btae165. doi: 10.1093/bioinformatics/btae165. Bioinformatics. 2024. PMID: 38530778 Free PMC article. - Interleukin-1β/Interleukin (IL)-1-Receptor-Antagonist (IL1-RA) Axis in Invasive Bladder Cancer-An Exploratory Analysis of Clinical and Tumor Biological Significance.
Vukovic M, Chamlati JM, Hennenlotter J, Todenhöfer T, Lütfrenk T, Jersinovic S, Tsaur I, Stenzl A, Rausch S. Vukovic M, et al. Int J Mol Sci. 2024 Feb 19;25(4):2447. doi: 10.3390/ijms25042447. Int J Mol Sci. 2024. PMID: 38397123 Free PMC article. - Novel urine-based DNA methylation biomarkers for urothelial bladder carcinoma detection in patients with hematuria.
Abol-Elnazer HF, Awadalla A, Ahmed AE, Abol-Enein H, Al Ganzouri MA, Elsawy AA. Abol-Elnazer HF, et al. Arab J Urol. 2023 May 14;21(4):248-257. doi: 10.1080/2090598X.2023.2208492. eCollection 2023. Arab J Urol. 2023. PMID: 38178946 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Medical
Research Materials
Miscellaneous