Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris - PubMed (original) (raw)

• A single-cell transcriptomic atlas characterizes ageing tissues in the mouse.
  Tabula Muris Consortium. Tabula Muris Consortium. Nature. 2020 Jul;583(7817):590-595. doi: 10.1038/s41586-020-2496-1. Epub 2020 Jul 15. Nature. 2020. PMID: 32669714 Free PMC article.
• The Tabula Sapiens: A multiple-organ, single-cell transcriptomic atlas of humans.
  Tabula Sapiens Consortium*; Jones RC, Karkanias J, Krasnow MA, Pisco AO, Quake SR, Salzman J, Yosef N, Bulthaup B, Brown P, Harper W, Hemenez M, Ponnusamy R, Salehi A, Sanagavarapu BA, Spallino E, Aaron KA, Concepcion W, Gardner JM, Kelly B, Neidlinger N, Wang Z, Crasta S, Kolluru S, Morri M, Tan SY, Travaglini KJ, Xu C, Alcántara-Hernández M, Almanzar N, Antony J, Beyersdorf B, Burhan D, Calcuttawala K, Carter MM, Chan CKF, Chang CA, Chang S, Colville A, Culver RN, Cvijović I, D'Amato G, Ezran C, Galdos FX, Gillich A, Goodyer WR, Hang Y, Hayashi A, Houshdaran S, Huang X, Irwin JC, Jang S, Juanico JV, Kershner AM, Kim S, Kiss B, Kong W, Kumar ME, Kuo AH, Li B, Loeb GB, Lu WJ, Mantri S, Markovic M, McAlpine PL, de Morree A, Mrouj K, Mukherjee S, Muser T, Neuhöfer P, Nguyen TD, Perez K, Puluca N, Qi Z, Rao P, Raquer-McKay H, Schaum N, Scott B, Seddighzadeh B, Segal J, Sen S, Sikandar S, Spencer SP, Steffes LC, Subramaniam VR, Swarup A, Swift M, Van Treuren W, Trimm E, Veizades S, Vijayakumar S, Vo KC, Vorperian SK, Wang W, Weinstein HNW, Winkler J, Wu TTH, Xie J, Yung AR, Zhang Y, Detweiler AM, Mekonen H, Neff NF, Sit RV, Tan M, Yan J, Bean GR, Charu V, Forgó E, Martin BA, Ozawa MG,… See abstract for full author list ➔ Tabula Sapiens Consortium*, et al. Science. 2022 May 13;376(6594):eabl4896. doi: 10.1126/science.abl4896. Epub 2022 May 13. Science. 2022. PMID: 35549404 Free PMC article.
• Ageing hallmarks exhibit organ-specific temporal signatures.
  Schaum N, Lehallier B, Hahn O, Pálovics R, Hosseinzadeh S, Lee SE, Sit R, Lee DP, Losada PM, Zardeneta ME, Fehlmann T, Webber JT, McGeever A, Calcuttawala K, Zhang H, Berdnik D, Mathur V, Tan W, Zee A, Tan M; Tabula Muris Consortium; Pisco AO, Karkanias J, Neff NF, Keller A, Darmanis S, Quake SR, Wyss-Coray T. Schaum N, et al. Nature. 2020 Jul;583(7817):596-602. doi: 10.1038/s41586-020-2499-y. Epub 2020 Jul 15. Nature. 2020. PMID: 32669715 Free PMC article.
• Microfluidic single-cell transcriptomics: moving towards multimodal and spatiotemporal omics.
  Lin S, Liu Y, Zhang M, Xu X, Chen Y, Zhang H, Yang C. Lin S, et al. Lab Chip. 2021 Oct 12;21(20):3829-3849. doi: 10.1039/d1lc00607j. Lab Chip. 2021. PMID: 34541590 Review.
• A primer for generating and using transcriptome data and gene sets.
  Cockrum C, Kaneshiro KR, Rechtsteiner A, Tabuchi TM, Strome S. Cockrum C, et al. Development. 2020 Dec 23;147(24):dev193854. doi: 10.1242/dev.193854. Development. 2020. PMID: 33361089 Free PMC article. Review.