Number and distribution of polyadenylated RNA sequences in yeast - PubMed (original) (raw)
Number and distribution of polyadenylated RNA sequences in yeast
L M Hereford et al. Cell. 1977 Mar.
Abstract
The poly(A)-containing RNA, isolated from the budding yeast Saccharomyces cerevisiae, has been characterized with regard to the number and distribution of sequences by a kinetic analysis of RNA-cDNA hybridization. In agreement with results previously obtained on metazoan eucaryotes (Bishop et al., 1974), discrete complexity classes were observed. There exist low, medium, and high complexity classes which contain approximately 20, 400, and 2400 sequences, respectively. This measurements of the number of sequences has been verified by hybridization with single copy DNA. 20% of the single copy fraction of the yeast genome is rendered double-stranded by poly(A)-containing RNA. Assuming asymmetric transcription, this is equivalent to approximately 4000 poly(A)-containing sequences, verifying the results obtained with RNA-cDNA hybridization. In addition, the first-order kinetics of the hybridization with single copy DNA verified the notion that most of the sequence complexity is present at the same intracellular concentration. The same number and distribution of sequences were found in poly(A)-containing polysomal RNA and in total RNA, suggesting that most or all of the sequence complexity is on polysomes and is adenylated. The results indicate that RNA-cDNA hybridization is an accurate method for determining sequence complexity values and that yeast, grown under vegetative conditions, has 3000-4000 different mRNA sequences.
Similar articles
- Sequence complexity and abundance classes of nuclear and polysomal polyadenylated RNA in Neurospora crassa.
Wong LJ, Marzluf GA. Wong LJ, et al. Biochim Biophys Acta. 1980 Mar 28;607(1):122-35. doi: 10.1016/0005-2787(80)90226-9. Biochim Biophys Acta. 1980. PMID: 6154479 - Sequence complexity of nuclear and polysomal RNA in leaves of the tobacco plant.
Goldberg RB, Hoschek G, Kamalay JC, Timberlake WE. Goldberg RB, et al. Cell. 1978 May;14(1):123-31. doi: 10.1016/0092-8674(78)90307-0. Cell. 1978. PMID: 667929 - Complex population of nonpolyadenylated messenger RNA in mouse brain.
Van Ness J, Maxwell IH, Hahn WE. Van Ness J, et al. Cell. 1979 Dec;18(4):1341-9. doi: 10.1016/0092-8674(79)90244-7. Cell. 1979. PMID: 519772 - Measurement of the complexity and diversity of poly(adenylic acid) containing messenger RNA from rat liver.
Savage MJ, Sala-Trepat JM, Bonner J. Savage MJ, et al. Biochemistry. 1978 Feb 7;17(3):462-7. doi: 10.1021/bi00596a014. Biochemistry. 1978. PMID: 74260 - Comparison of complexity and diversity of polyadenylated polysomal and informosomal messenger ribonucleic acid from Chinese hamster cells.
Walters RA, Yandell PM, Enger MD. Walters RA, et al. Biochemistry. 1979 Sep 18;18(19):4254-61. doi: 10.1021/bi00586a034. Biochemistry. 1979. PMID: 486422
Cited by
- Noise robustness and metabolic load determine the principles of central dogma regulation.
Lo TW, Choi HJ, Huang D, Wiggins PA. Lo TW, et al. Sci Adv. 2024 Aug 23;10(34):eado3095. doi: 10.1126/sciadv.ado3095. Epub 2024 Aug 23. Sci Adv. 2024. PMID: 39178264 Free PMC article. - Noise robustness and metabolic load determine the principles of central dogma regulation.
Lo TW, James Choi H, Huang D, Wiggins PA. Lo TW, et al. bioRxiv [Preprint]. 2024 Aug 15:2023.10.20.563172. doi: 10.1101/2023.10.20.563172. bioRxiv. 2024. PMID: 38826369 Free PMC article. Updated. Preprint. - Three Rounds of Read Correction Significantly Improve Eukaryotic Protein Detection in ONT Reads.
Safar HA, Alatar F, Mustafa AS. Safar HA, et al. Microorganisms. 2024 Jan 24;12(2):247. doi: 10.3390/microorganisms12020247. Microorganisms. 2024. PMID: 38399651 Free PMC article. - Noise robustness and metabolic load determine the principles of central dogma regulation.
Lo TW, James Choi H, Huang D, Wiggins PA. Lo TW, et al. ArXiv [Preprint]. 2024 Aug 15:arXiv:2310.13803v4. ArXiv. 2024. PMID: 38259345 Free PMC article. Updated. Preprint. - Future Perspectives for the Identification and Sequencing of Nicotinamide Adenine Dinucleotide-Capped RNAs.
Möhler M, Jäschke A. Möhler M, et al. Acc Chem Res. 2023 Nov 7;56(21):3000-3009. doi: 10.1021/acs.accounts.3c00446. Epub 2023 Oct 18. Acc Chem Res. 2023. PMID: 37852615 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources