Frequency distribution of messenger sequences within polysomal mRNA and nuclear RNA from rat liver - PubMed (original) (raw)
Frequency distribution of messenger sequences within polysomal mRNA and nuclear RNA from rat liver
A E Sippel et al. Eur J Biochem. 1977.
Free article
Abstract
DNA complementary to polysomal poly(A)-containing mRNA (cDNA) of male rat liver was used to study the diversity of messenger sequences in the nucleus and in polysomes. 1. Hybridization of cDNA against an excess of its own polysomal mRNA template revealed that about 10,000 different mRNA species are expressed in the liver tissue. They are distributed in a wide frequency range derived from approximately 0.5% of the total genome. 2. Hybridization of the cDNA against total nuclear RNA shows that messenger sequences comprise less than 1% of the mass of total nuclear RNA. Messenger sequences have a different frequency distribution in nucleus and cytoplasm. 3. In hybridizations using cDNA, which had been fractionated into sequences representing abundant and scarce polysomal mRNA molecules, it was found that although abundant cytoplasmic messenger sequences are also abundant in the nucleus, they exist in a significantly lower frequency range in the nuclear compartment.
Similar articles
- Size distribution of rat liver nuclear RNA containing mRNA sequences.
Sippel AE, Groner B, Hynes N, Schütz G. Sippel AE, et al. Eur J Biochem. 1977 Jul 1;77(1):153-64. doi: 10.1111/j.1432-1033.1977.tb11653.x. Eur J Biochem. 1977. PMID: 908333 - Comparison of polysomal and nuclear poly(A)-containing RNA populations from normal rat liver and Novikoff hepatoma.
Capetanaki YG, Alonso A. Capetanaki YG, et al. Nucleic Acids Res. 1980 Jul 25;8(14):3193-214. doi: 10.1093/nar/8.14.3193. Nucleic Acids Res. 1980. PMID: 6160467 Free PMC article. - Changes in nuclear and polysomal polyadenylated RNA sequences during rat-liver regeneration.
Wilkes PR, Birnie GD, Paul J. Wilkes PR, et al. Nucleic Acids Res. 1979;6(6):2193-208. doi: 10.1093/nar/6.6.2193. Nucleic Acids Res. 1979. PMID: 461186 Free PMC article. - Methisoprinol enhancement of nucleocytoplasmic transport of putative messenger RNA in rat liver. its relation to host defense against virus infection.
Ronsen B, Gordon P. Ronsen B, et al. Biochem Pharmacol. 1976 Mar 15;25(6):707-15. doi: 10.1016/0006-2952(76)90248-3. Biochem Pharmacol. 1976. PMID: 58660 Review. No abstract available. - Characteristics and significance of the polyadenylate sequence in mammalian messenger RNA.
Brawerman G. Brawerman G. Prog Nucleic Acid Res Mol Biol. 1976;17:117-48. doi: 10.1016/s0079-6603(08)60068-9. Prog Nucleic Acid Res Mol Biol. 1976. PMID: 778919 Review. No abstract available.
Cited by
- A comparison of sequence complexity of nuclear and polysomal poly(A)+ RNA from different developmental stages ofXenopus laevis.
Knöchel W, Bladauski D. Knöchel W, et al. Wilehm Roux Arch Dev Biol. 1980 Oct;188(3):187-193. doi: 10.1007/BF00849047. Wilehm Roux Arch Dev Biol. 1980. PMID: 28305755 - Chromatin-associated transcripts of tandemly repetitive DNA sequences revealed by RNA-FISH.
Koo DH, Zhao H, Jiang J. Koo DH, et al. Chromosome Res. 2016 Dec;24(4):467-480. doi: 10.1007/s10577-016-9537-5. Epub 2016 Sep 2. Chromosome Res. 2016. PMID: 27590598 - Comparison of total and cytoplasmic mRNA reveals global regulation by nuclear retention and miRNAs.
Solnestam BW, Stranneheim H, Hällman J, Käller M, Lundberg E, Lundeberg J, Akan P. Solnestam BW, et al. BMC Genomics. 2012 Oct 30;13:574. doi: 10.1186/1471-2164-13-574. BMC Genomics. 2012. PMID: 23110385 Free PMC article. - Microarray analysis of cytoplasmic versus whole cell RNA reveals a considerable number of missed and false positive mRNAs.
Trask HW, Cowper-Sal-lari R, Sartor MA, Gui J, Heath CV, Renuka J, Higgins AJ, Andrews P, Korc M, Moore JH, Tomlinson CR. Trask HW, et al. RNA. 2009 Oct;15(10):1917-28. doi: 10.1261/rna.1677409. Epub 2009 Aug 24. RNA. 2009. PMID: 19703940 Free PMC article. - Frequency distribution of pre-messenger RNA sequences in polyadenylated and non-polyadenylated nuclear RNA from Friend cells.
Balmain A, Minty AJ, Birnie GD. Balmain A, et al. Nucleic Acids Res. 1980 Apr 11;8(7):1643-60. doi: 10.1093/nar/8.7.1643. Nucleic Acids Res. 1980. PMID: 7433127 Free PMC article.
MeSH terms
Substances
LinkOut - more resources
Full Text Sources