PCR amplification of variable sequence upstream of katG gene to subdivide strains of Mycobacterium tuberculosis complex - PubMed (original) (raw)

PCR amplification of variable sequence upstream of katG gene to subdivide strains of Mycobacterium tuberculosis complex

M Goyal et al. J Clin Microbiol. 1994 Dec.

Abstract

PCR amplification of a species-specific 2-kb KpnI fragment of variable size located 10 kb upstream of the katG gene was used to subdivide 130 clinical isolates of Mycobacterium tuberculosis. Seven subtypes were identified, and their frequencies were distributed normally with respect to the size of the amplified product.

PubMed Disclaimer

Similar articles

• Contribution of AGC to ACC and other mutations at codon 315 of the katG gene in isoniazid-resistant Mycobacterium tuberculosis isolates from the Middle East.
  Ahmad S, Mokaddas E. Ahmad S, et al. Int J Antimicrob Agents. 2004 May;23(5):473-9. doi: 10.1016/j.ijantimicag.2003.10.004. Int J Antimicrob Agents. 2004. PMID: 15120726
• Strain variation in the katG region of Mycobacterium tuberculosis.
  Zhang Y, Young D. Zhang Y, et al. Mol Microbiol. 1994 Oct;14(2):301-8. doi: 10.1111/j.1365-2958.1994.tb01291.x. Mol Microbiol. 1994. PMID: 7830574
• Molecular characterization of isoniazid-resistant Mycobacterium tuberculosis isolates from Xi'an, China.
  Zhou A, Nawaz M, Duan Y, Moore JE, Millar BC, Xu J, Yao Y. Zhou A, et al. Microb Drug Resist. 2011 Jun;17(2):275-81. doi: 10.1089/mdr.2010.0135. Epub 2011 Mar 9. Microb Drug Resist. 2011. PMID: 21388297
• Polymerase chain reaction typing of nonviable Mycobacterium tuberculosis isolates.
  Loeffelholz MJ, Thompson CJ, Gaunt DD, Koontz FP, Gilchrist MJ. Loeffelholz MJ, et al. Diagn Microbiol Infect Dis. 1996 Nov-Dec;26(3-4):149-51. doi: 10.1016/s0732-8893(96)00214-3. Diagn Microbiol Infect Dis. 1996. PMID: 9078452

Cited by

• DNA fingerprinting techniques for microorganisms. A proposal for classification and nomenclature.
  Vaneechoutte M. Vaneechoutte M. Mol Biotechnol. 1996 Oct;6(2):115-42. doi: 10.1007/BF02740768. Mol Biotechnol. 1996. PMID: 8970167 Review.
• Molecular epidemiology of tuberculosis: current insights.
  Mathema B, Kurepina NE, Bifani PJ, Kreiswirth BN. Mathema B, et al. Clin Microbiol Rev. 2006 Oct;19(4):658-85. doi: 10.1128/CMR.00061-05. Clin Microbiol Rev. 2006. PMID: 17041139 Free PMC article. Review.
• Proposal for standardization of optimized mycobacterial interspersed repetitive unit-variable-number tandem repeat typing of Mycobacterium tuberculosis.
  Supply P, Allix C, Lesjean S, Cardoso-Oelemann M, Rüsch-Gerdes S, Willery E, Savine E, de Haas P, van Deutekom H, Roring S, Bifani P, Kurepina N, Kreiswirth B, Sola C, Rastogi N, Vatin V, Gutierrez MC, Fauville M, Niemann S, Skuce R, Kremer K, Locht C, van Soolingen D. Supply P, et al. J Clin Microbiol. 2006 Dec;44(12):4498-510. doi: 10.1128/JCM.01392-06. Epub 2006 Sep 27. J Clin Microbiol. 2006. PMID: 17005759 Free PMC article.
• Differentiation of strains in Mycobacterium tuberculosis complex by DNA sequence polymorphisms, including rapid identification of M. bovis BCG.
  Frothingham R. Frothingham R. J Clin Microbiol. 1995 Apr;33(4):840-4. doi: 10.1128/jcm.33.4.840-844.1995. J Clin Microbiol. 1995. PMID: 7790448 Free PMC article.
• Mycobacterium tuberculosis complex in wildlife: Review of current applications of antemortem and postmortem diagnosis.
  Lekko YM, Ooi PT, Omar S, Mazlan M, Ramanoon SZ, Jasni S, Jesse FFA, Che-Amat A. Lekko YM, et al. Vet World. 2020 Sep;13(9):1822-1836. doi: 10.14202/vetworld.2020.1822-1836. Epub 2020 Sep 9. Vet World. 2020. PMID: 33132593 Free PMC article. Review.

References

1. 1. J Clin Microbiol. 1992 Apr;30(4):942-6 - PubMed
2. 1. N Engl J Med. 1992 Jun 4;326(23):1514-21 - PubMed
3. 1. Nature. 1992 Aug 13;358(6387):591-3 - PubMed
4. 1. J Infect Dis. 1993 Apr;167(4):975-8 - PubMed
5. 1. J Clin Microbiol. 1991 Jun;29(6):1252-4 - PubMed

Publication types

MeSH terms

Substances

LinkOut - more resources

• Full Text Sources

  • Atypon
  • Europe PubMed Central
  • PubMed Central