Evolutionary relationships of lactate dehydrogenases (LDHs) from mammals, birds, an amphibian, fish, barley, and bacteria: LDH cDNA sequences from Xenopus, pig, and rat - PubMed (original) (raw)
Comparative Study
Evolutionary relationships of lactate dehydrogenases (LDHs) from mammals, birds, an amphibian, fish, barley, and bacteria: LDH cDNA sequences from Xenopus, pig, and rat
S Tsuji et al. Proc Natl Acad Sci U S A. 1994.
Abstract
The nucleotide sequences of the cDNAs encoding LDH (EC 1.1.1.27) subunits LDH-A (muscle), LDH-B (liver), and LDH-C (oocyte) from Xenopus laevis, LDH-A (muscle) and LDH-B (heart) from pig, and LDH-B (heart) and LDH-C (testis) from rat were determined. These seven newly deduced amino acid sequences and 22 other published LDH sequences, and three unpublished fish LDH-A sequences kindly provided by G. N. Somero and D. A. Powers, were used to construct the most parsimonious phylogenetic tree of these 32 LDH subunits from mammals, birds, an amphibian, fish, barley, and bacteria. There have been at least six LDH gene duplications among the vertebrates. The Xenopus LDH-A, LDH-B, and LDH-C subunits are most closely related to each other and then are more closely related to vertebrate LDH-B than LDH-A. Three fish LDH-As, as well as a single LDH of lamprey, also seem to be more related to vertebrate LDH-B than to land vertebrate LDH-A. The mammalian LDH-C (testis) subunit appears to have diverged very early, prior to the divergence of vertebrate LDH-A and LDH-B subunits, as reported previously.
Similar articles
- The nucleotide and deduced amino-acid sequences of a cDNA encoding lactate dehydrogenase from Caenorhabditis elegans: the evolutionary relationships of lactate dehydrogenases from mammals, birds, amphibian, fish, nematode, plants, bacteria, mycoplasma, and plasmodium.
Tsoi SC, Li SS. Tsoi SC, et al. Biochem Biophys Res Commun. 1994 Nov 30;205(1):558-64. doi: 10.1006/bbrc.1994.2701. Biochem Biophys Res Commun. 1994. PMID: 7999079 - Sequence analysis of teleost retina-specific lactate dehydrogenase C: evolutionary implications for the vertebrate lactate dehydrogenase gene family.
Quattro JM, Woods HA, Powers DA. Quattro JM, et al. Proc Natl Acad Sci U S A. 1993 Jan 1;90(1):242-6. doi: 10.1073/pnas.90.1.242. Proc Natl Acad Sci U S A. 1993. PMID: 8419929 Free PMC article. - Lactate dehydrogenase (LDH) gene duplication during chordate evolution: the cDNA sequence of the LDH of the tunicate Styela plicata.
Stock DW, Quattro JM, Whitt GS, Powers DA. Stock DW, et al. Mol Biol Evol. 1997 Dec;14(12):1273-84. doi: 10.1093/oxfordjournals.molbev.a025737. Mol Biol Evol. 1997. PMID: 9402738 - Chemokines.
Laing KJ, Secombes CJ. Laing KJ, et al. Dev Comp Immunol. 2004 May 3;28(5):443-60. doi: 10.1016/j.dci.2003.09.006. Dev Comp Immunol. 2004. PMID: 15062643 Review. - Some aspects of isozymes of lactate dehydrogenase, malate dehydrogenase and glucosephosphate isomerase in fish.
Basaglia F. Basaglia F. Comp Biochem Physiol B. 1989;92(2):213-26. doi: 10.1016/0305-0491(89)90269-1. Comp Biochem Physiol B. 1989. PMID: 2647391 Review.
Cited by
- Deciphering Evolutionary Trajectories of Lactate Dehydrogenases Provides New Insights into Allostery.
Robin AY, Brochier-Armanet C, Bertrand Q, Barette C, Girard E, Madern D. Robin AY, et al. Mol Biol Evol. 2023 Oct 4;40(10):msad223. doi: 10.1093/molbev/msad223. Mol Biol Evol. 2023. PMID: 37797308 Free PMC article. - Activation of J774.1 murine macrophages by lactate dehydrogenase.
Daifuku M, Nishi K, Okamoto T, Sugahara T. Daifuku M, et al. Cytotechnology. 2014 Dec;66(6):937-43. doi: 10.1007/s10616-013-9646-3. Epub 2013 Oct 8. Cytotechnology. 2014. PMID: 24101442 Free PMC article. - D- and L-lactate dehydrogenases during invertebrate evolution.
Cristescu ME, Innes DJ, Stillman JH, Crease TJ. Cristescu ME, et al. BMC Evol Biol. 2008 Oct 1;8:268. doi: 10.1186/1471-2148-8-268. BMC Evol Biol. 2008. PMID: 18828920 Free PMC article. - Polymorphism within the LDHA gene in the homing and non-homing pigeons.
Dybus A, Pijanka J, Cheng YH, Sheen F, Grzesiak W, Muszyńska M. Dybus A, et al. J Appl Genet. 2006;47(1):63-6. doi: 10.1007/BF03194601. J Appl Genet. 2006. PMID: 16424611 - Isolation and expression of lactate dehydrogenase genes from Rhizopus oryzae.
Skory CD. Skory CD. Appl Environ Microbiol. 2000 Jun;66(6):2343-8. doi: 10.1128/AEM.66.6.2343-2348.2000. Appl Environ Microbiol. 2000. PMID: 10831409 Free PMC article.
References
- J Biol Chem. 1983 Jun 10;258(11):7029-32 - PubMed
- Proc Natl Acad Sci U S A. 1993 Jan 1;90(1):242-6 - PubMed
- Hoppe Seylers Z Physiol Chem. 1983 Jul;364(7):893-909 - PubMed
- Eur J Biochem. 1985 Feb 15;147(1):9-15 - PubMed
- Eur J Biochem. 1985 Jun 3;149(2):215-25 - PubMed
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases
Research Materials
Miscellaneous