Role of the histone amino termini in facilitated binding of a transcription factor, GAL4-AH, to nucleosome cores - PubMed (original) (raw)
Role of the histone amino termini in facilitated binding of a transcription factor, GAL4-AH, to nucleosome cores
M Vettese-Dadey et al. Mol Cell Biol. 1994 Feb.
Abstract
Facilitated, "cooperative" binding of GAL4-AH to nucleosomal DNA occurred in response to inhibition from the core histone amino termini. The binding of GAL4-AH (which contains the DNA-binding and dimerization domains of GAL4) to nucleosome cores containing multiple binding sites initiated at the end of a nucleosome core and proceeded in a cooperative manner until all sites were occupied. However, following tryptic removal of the core histone amino termini, GAL4-AH binding appeared to be noncooperative, similar to binding naked DNA. Binding of GAL4-AH to nucleosomes bearing a single GAL4 site at different positions indicated that inhibition of GAL4 binding was largely mediated by the histone amino termini and primarily occurred at sites well within the core and not near the end. When the histone amino termini were intact, binding of GAL4-AH to sites near the center of a nucleosome core was greatly enhanced by the presence of additional GAL4 dimers bound to more-accessible positions. These data illustrate that the binding of a factor to more-accessible sites, near the end of a nucleosome, allows facilitated binding of additional factors to the center of the nucleosome, thereby overcoming repression from the core histone amino termini. This mechanism may contribute to the binding of multiple factors to complex promoter and enhancer elements in cellular chromatin.
Similar articles
- Acetylation of histone H4 plays a primary role in enhancing transcription factor binding to nucleosomal DNA in vitro.
Vettese-Dadey M, Grant PA, Hebbes TR, Crane- Robinson C, Allis CD, Workman JL. Vettese-Dadey M, et al. EMBO J. 1996 May 15;15(10):2508-18. EMBO J. 1996. PMID: 8665858 Free PMC article. - Nucleosome core displacement in vitro via a metastable transcription factor-nucleosome complex.
Workman JL, Kingston RE. Workman JL, et al. Science. 1992 Dec 11;258(5089):1780-4. doi: 10.1126/science.1465613. Science. 1992. PMID: 1465613 - Binding of disparate transcriptional activators to nucleosomal DNA is inherently cooperative.
Adams CC, Workman JL. Adams CC, et al. Mol Cell Biol. 1995 Mar;15(3):1405-21. doi: 10.1128/MCB.15.3.1405. Mol Cell Biol. 1995. PMID: 7862134 Free PMC article. - Remodeling chromatin structures for transcription: what happens to the histones?
Steger DJ, Workman JL. Steger DJ, et al. Bioessays. 1996 Nov;18(11):875-84. doi: 10.1002/bies.950181106. Bioessays. 1996. PMID: 8939065 Review. - Yeast HMO1: Linker Histone Reinvented.
Panday A, Grove A. Panday A, et al. Microbiol Mol Biol Rev. 2016 Nov 30;81(1):e00037-16. doi: 10.1128/MMBR.00037-16. Print 2017 Mar. Microbiol Mol Biol Rev. 2016. PMID: 27903656 Free PMC article. Review.
Cited by
- A test of the pioneer factor hypothesis using ectopic liver gene activation.
Hansen JL, Loell KJ, Cohen BA. Hansen JL, et al. Elife. 2022 Jan 5;11:e73358. doi: 10.7554/eLife.73358. Elife. 2022. PMID: 34984978 Free PMC article. - Chromatin-modifying drugs and metabolites in cell fate control.
Yao Z, Chen Y, Cao W, Shyh-Chang N. Yao Z, et al. Cell Prolif. 2020 Nov;53(11):e12898. doi: 10.1111/cpr.12898. Epub 2020 Sep 26. Cell Prolif. 2020. PMID: 32979011 Free PMC article. Review. - Pioneer factors and their in vitro identification methods.
Yu X, Buck MJ. Yu X, et al. Mol Genet Genomics. 2020 Jul;295(4):825-835. doi: 10.1007/s00438-020-01675-9. Epub 2020 Apr 15. Mol Genet Genomics. 2020. PMID: 32296927 Free PMC article. Review. - Defining TP53 pioneering capabilities with competitive nucleosome binding assays.
Yu X, Buck MJ. Yu X, et al. Genome Res. 2019 Jan;29(1):107-115. doi: 10.1101/gr.234104.117. Epub 2018 Nov 8. Genome Res. 2019. PMID: 30409772 Free PMC article. - Human OGG1 activity in nucleosomes is facilitated by transient unwrapping of DNA and is influenced by the local histone environment.
Bilotti K, Kennedy EE, Li C, Delaney S. Bilotti K, et al. DNA Repair (Amst). 2017 Nov;59:1-8. doi: 10.1016/j.dnarep.2017.08.010. Epub 2017 Sep 1. DNA Repair (Amst). 2017. PMID: 28892740 Free PMC article.
References
- Cell. 1990 Mar 9;60(5):719-31 - PubMed
- Cell. 1993 Jan 15;72(1):73-84 - PubMed
- EMBO J. 1990 Apr;9(4):1299-308 - PubMed
- Nature. 1990 May 24;345(6273):361-4 - PubMed
- Annu Rev Cell Biol. 1990;6:643-78 - PubMed
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Molecular Biology Databases