Cytosine methylation and the ecology of intragenomic parasites - PubMed (original) (raw)
Review
Cytosine methylation and the ecology of intragenomic parasites
J A Yoder et al. Trends Genet. 1997 Aug.
Free article
Abstract
Most of the 5-methylcytosine in mammalian DNA resides in transposons, which are specialized intragenomic parasites that represent at least 35% of the genome. Transposon promoters are inactive when methylated and, over time, C-->T transition mutations at methylated sites destroy many transposons. Apart from that subset of genes subject to X inactivation and genomic imprinting, no cellular gene in a non-expressing tissue has been proven to be methylated in a pattern that prevents transcription. It has become increasingly difficult to hold that reversible promoter methylation is commonly involved in developmental gene control; instead, suppression of parasitic sequence elements appears to be the primary function of cytosine methylation, with crucial secondary roles in allele-specific gene expression as seen in X inactivation and genomic imprinting.
Comment in
- Exploring and explaining epigenetic effects.
Henikoff S, Matzke MA. Henikoff S, et al. Trends Genet. 1997 Aug;13(8):293-5. doi: 10.1016/s0168-9525(97)01219-5. Trends Genet. 1997. PMID: 9260513 No abstract available. - Does DNA methylation control transposition of selfish elements in the germline?
Bird A. Bird A. Trends Genet. 1997 Dec;13(12):469-72. doi: 10.1016/s0168-9525(97)01310-3. Trends Genet. 1997. PMID: 9433135 No abstract available.
Similar articles
- The host defence function of genomic methylation patterns.
Bestor TH. Bestor TH. Novartis Found Symp. 1998;214:187-95; discussion 195-9, 228-32. doi: 10.1002/9780470515501.ch11. Novartis Found Symp. 1998. PMID: 9601018 Review. - Cytosine methylation mediates sexual conflict.
Bestor TH. Bestor TH. Trends Genet. 2003 Apr;19(4):185-90. doi: 10.1016/S0168-9525(03)00049-0. Trends Genet. 2003. PMID: 12683970 - Sex brings transposons and genomes into conflict.
Bestor TH. Bestor TH. Genetica. 1999;107(1-3):289-95. Genetica. 1999. PMID: 10952219 - Experimental manipulation of genomic methylation.
Jackson-Grusby L, Jaenisch R. Jackson-Grusby L, et al. Semin Cancer Biol. 1996 Oct;7(5):261-8. doi: 10.1006/scbi.1996.0034. Semin Cancer Biol. 1996. PMID: 9110403 Review. - The DNA methyltransferases of mammals.
Bestor TH. Bestor TH. Hum Mol Genet. 2000 Oct;9(16):2395-402. doi: 10.1093/hmg/9.16.2395. Hum Mol Genet. 2000. PMID: 11005794 Review.
Cited by
- Unveiling the imprinted dance: how parental genomes orchestrate seed development and hybrid success.
Muthusamy M, Pandian S, Shin EK, An HK, Sohn SI. Muthusamy M, et al. Front Plant Sci. 2024 Sep 27;15:1455685. doi: 10.3389/fpls.2024.1455685. eCollection 2024. Front Plant Sci. 2024. PMID: 39399543 Free PMC article. Review. - Mechanistic model for epigenetic maintenance by methyl-CpG-binding domain proteins.
Dai L, Johnson-Buck A, Walter NG. Dai L, et al. bioRxiv [Preprint]. 2024 Sep 24:2024.09.22.614380. doi: 10.1101/2024.09.22.614380. bioRxiv. 2024. PMID: 39386650 Free PMC article. Preprint. - Centromeric transposable elements and epigenetic status drive karyotypic variation in the eastern hoolock gibbon.
Hartley GA, Okhovat M, Hoyt SJ, Fuller E, Pauloski N, Alexandre N, Alexandrov I, Drennan R, Dubocanin D, Gilbert DM, Mao Y, McCann C, Neph S, Ryabov F, Sasaki T, Storer JM, Svendsen D, Troy W, Wells J, Core L, Stergachis A, Carbone L, O'Neill RJ. Hartley GA, et al. bioRxiv [Preprint]. 2024 Aug 30:2024.08.29.610280. doi: 10.1101/2024.08.29.610280. bioRxiv. 2024. PMID: 39257810 Free PMC article. Preprint. - DNA methylation governs the sensitivity of repeats to restriction by the HUSH-MORC2 corepressor.
Pandiloski N, Horváth V, Karlsson O, Koutounidou S, Dorazehi F, Christoforidou G, Matas-Fuentes J, Gerdes P, Garza R, Jönsson ME, Adami A, Atacho DAM, Johansson JG, Englund E, Kokaia Z, Jakobsson J, Douse CH. Pandiloski N, et al. Nat Commun. 2024 Aug 30;15(1):7534. doi: 10.1038/s41467-024-50765-4. Nat Commun. 2024. PMID: 39214989 Free PMC article. - DNA Methylation of PXDN Is Associated with Early-Life Adversity in Adult Mental Disorders.
Edelmann S, Balaji J, Pasche S, Wiegand A, Nieratschker V. Edelmann S, et al. Biomolecules. 2024 Aug 9;14(8):976. doi: 10.3390/biom14080976. Biomolecules. 2024. PMID: 39199364 Free PMC article.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Other Literature Sources
Molecular Biology Databases