Who's who among the Saccharomyces cerevisiae actin-related proteins? A classification and nomenclature proposal for a large family - PubMed (original) (raw)
Who's who among the Saccharomyces cerevisiae actin-related proteins? A classification and nomenclature proposal for a large family
O Poch et al. Yeast. 1997.
Abstract
Inspection of the complete Saccharomyces cerevisiae genome sequence and analysis of the actin-related proteins (ARPs) found therein revealed seven proteins, in addition to the previously designated actin-related proteins Arp1, Arp2 and Arp3, which contained substantial blocks of conservation relative to a chosen sub-set of actins. We have ordered the new ARPs relative to this group of actins and propose to name the more distantly related ARP members, according to their amino acid identity and similarity, Arp4-Arp10. Most of these proteins appear to represent the first example of new classes of ARPs, each of which may have specific localization(s) and cellular function(s). Recently reported ARPs from other species have also been included in the phylogenetic tree derived from the overall alignment of 29 actins and 28 ARPs.
Similar articles
- Identification of a novel actin-related protein in Tetrahymena cilia.
Kuribara S, Kato M, Kato-Minoura T, Numata O. Kuribara S, et al. Cell Motil Cytoskeleton. 2006 Jul;63(7):437-46. doi: 10.1002/cm.20136. Cell Motil Cytoskeleton. 2006. PMID: 16732560 - Arp1, an actin-related protein, in Plasmodium berghei.
Siden-Kiamos I, Schüler H, Liakopoulos D, Louis C. Siden-Kiamos I, et al. Mol Biochem Parasitol. 2010 Oct;173(2):88-96. doi: 10.1016/j.molbiopara.2010.05.008. Epub 2010 May 16. Mol Biochem Parasitol. 2010. PMID: 20580650 - Sequence and comparative genomic analysis of actin-related proteins.
Muller J, Oma Y, Vallar L, Friederich E, Poch O, Winsor B. Muller J, et al. Mol Biol Cell. 2005 Dec;16(12):5736-48. doi: 10.1091/mbc.e05-06-0508. Epub 2005 Sep 29. Mol Biol Cell. 2005. PMID: 16195354 Free PMC article. - Actin-related proteins (Arps): conformational switches for chromatin-remodeling machines?
Boyer LA, Peterson CL. Boyer LA, et al. Bioessays. 2000 Jul;22(7):666-72. doi: 10.1002/1521-1878(200007)22:7<666::AID-BIES9>3.0.CO;2-Y. Bioessays. 2000. PMID: 10878579 Review. - Plant actin-related proteins.
Kandasamy MK, Deal RB, McKinney EC, Meagher RB. Kandasamy MK, et al. Trends Plant Sci. 2004 Apr;9(4):196-202. doi: 10.1016/j.tplants.2004.02.004. Trends Plant Sci. 2004. PMID: 15063870 Review.
Cited by
- Actin-related protein 5 suppresses the cooperative activation of cardiac gene transcription by myocardin and MEF2.
Morita T, Hayashi K. Morita T, et al. FEBS Open Bio. 2023 Feb;13(2):363-379. doi: 10.1002/2211-5463.13549. Epub 2023 Jan 12. FEBS Open Bio. 2023. PMID: 36610028 Free PMC article. - Reduced gene dosage of histone H4 prevents CENP-A mislocalization and chromosomal instability in Saccharomyces cerevisiae.
Eisenstatt JR, Ohkuni K, Au WC, Preston O, Gliford L, Suva E, Costanzo M, Boone C, Basrai MA. Eisenstatt JR, et al. Genetics. 2021 May 17;218(1):iyab033. doi: 10.1093/genetics/iyab033. Genetics. 2021. PMID: 33751052 Free PMC article. - Actin-related protein Arp4 regulates euchromatic gene expression and development through H2A.Z deposition in blood-stage Plasmodium falciparum.
Liu H, Cui XY, Xu DD, Wang F, Meng LW, Zhao YM, Liu M, Shen SJ, He XH, Fang Q, Tao ZY, Jiang CZ, Zhang QF, Gu L, Xia H. Liu H, et al. Parasit Vectors. 2020 Jun 17;13(1):314. doi: 10.1186/s13071-020-04139-6. Parasit Vectors. 2020. PMID: 32552779 Free PMC article. - The Nature of Actin-Family Proteins in Chromatin-Modifying Complexes.
Klages-Mundt NL, Kumar A, Zhang Y, Kapoor P, Shen X. Klages-Mundt NL, et al. Front Genet. 2018 Sep 25;9:398. doi: 10.3389/fgene.2018.00398. eCollection 2018. Front Genet. 2018. PMID: 30319687 Free PMC article. Review. - The Emerging Role of the Cytoskeleton in Chromosome Dynamics.
Spichal M, Fabre E. Spichal M, et al. Front Genet. 2017 May 19;8:60. doi: 10.3389/fgene.2017.00060. eCollection 2017. Front Genet. 2017. PMID: 28580009 Free PMC article. Review.
Publication types
MeSH terms
Substances
LinkOut - more resources
Full Text Sources
Molecular Biology Databases
Miscellaneous